2024-11-21 22:17:31, GGRNA.v2 : RefSeq release 226 (Sep, 2024)
LOCUS XR_008039512 3726 bp RNA linear INV 29-NOV-2022 DEFINITION PREDICTED: Dreissena polymorpha uncharacterized LOC127859885 (LOC127859885), transcript variant X3, ncRNA. ACCESSION XR_008039512 VERSION XR_008039512.1 DBLINK BioProject: PRJNA903932 KEYWORDS RefSeq. SOURCE Dreissena polymorpha ORGANISM Dreissena polymorpha Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Heteroconchia; Euheterodonta; Imparidentia; Neoheterodontei; Myida; Dreissenoidea; Dreissenidae; Dreissena. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_068369) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: Dreissena polymorpha Annotation Release 100 Annotation Version :: 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3726 /organism="Dreissena polymorpha" /mol_type="transcribed RNA" /isolate="Duluth1" /db_xref="taxon:45954" /chromosome="15" /sex="male" /tissue_type="Whole animal" /dev_stage="adult" /geo_loc_name="USA: Lake Superior, Duluth, MN" /lat_lon="46.78671 N 92.09114 W" /collection_date="2017-06" gene 1..3726 /gene="LOC127859885" /note="uncharacterized LOC127859885; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:127859885" ncRNA 1..3726 /ncRNA_class="lncRNA" /gene="LOC127859885" /product="uncharacterized LOC127859885, transcript variant X3" /experiment="COORDINATES: polyA evidence [ECO:0006239]" /db_xref="GeneID:127859885" ORIGIN
ggcgggcggcgtgctcgaaaatgttaaagttcttatttcatggtataactttggtatgcttggacctagagtcttcaaacttgacatgaaggttggccaggattaacagatgaccactggtcatttcaaggtcattcatttgaaggtcaaggtcactgtgaccttcaatataaaaaatgttaaagttgttataactttggtatgcttggacctagagtcttgaaacttgacaagaaggttggccataactagttagtaaccactggtcatttcaaggtcattcatttgaaggtcaaggtcactgtgaccttgaatgtaaaaatgttaaagttcttatttcatggtataactttggtatgcttggacctagagtcttcaaacttgacatgaaggttggccaggattaacagatgaccactggtcatttcaaggtcattcatttgaaggtcaaggtcactgtgaccttcaatataaaaaatgttaaagttgttataactttggtatgcttggacctagagtcttgaaacttgacaagaaggttggccataactagttagtaaccactggtcatttcaaggtcattcatttgcaggtcaaggtcactgtgaccttcaatataaaaaatgttaaagttgttataactttggtatgcttggacctagagtcttgaaacttgacaagaaggttggccataactagttagtaaccactggtcatttcaaggtcattcatttgaaggtcaaggtcactgtgaccttgaatgtaaaaatgttaaagttcttatttcatggtataactttggtatgcttggacctagagtcttcaaacttgacatgaaggttggccaggattaacagatgaccactggtcatttcaaggtcattcatttgaaggtgaaggtcactgtgaccttcaatataaaaatgttaaagttgttataactttggtatgcttggacctagagtcttgaaacttgacatgaaggttggccagaactagtaagtaaccactggacatttcaaggtcattcatttgaaggtcaaggtcactgtgaccttgaatgtaaaaatgttaaagttgttataactttggtatgcttggacctagagtcttgaaacttgacatgaaggttggccagaactagtaagtaaccactggacatttcaaggtcattcatttgaaggtcaaggtcacttacatttgataatgaaattgatggaaacttcaaacaatatgttactaatttgctaataaaaaaattgagatcaaactttcctaattgtcaattcaagttcatatttgtgaccttaaatgttattgttgttcatgtatatgcatgcattcaaaacataacacaaggtttgctcatgccttgaaaagtacttacatttcattttgacctttgaacaatatttcagtaatttaagtattgcattgacaaaaacacgaaaggtactttcctgtcatttaaatcaaaaatccggcttcaatgcggtcatctccgaccgcggaactcttgtttaaattatgctggtatattcagcattccaaatagatatgcattattaatattatcatcttatagtcacatatcttaatttatattttctacaatttttgagtttttagctcacctgattgctcaggtgagcttttgtgaccattctttgtctgtcgtatgtccgtccgtccgtaaacatttgctcataaacactctagaggccacatttcttgtcccatcttcatgaaacttggtcagaagctttgtcccaatgaaatcttggtcgagttcaaaactgggttgtgccgggtcaaaaactaggtcactaggtcaaaaaaagaaaatccttgtaaacactgtagaaatcacatttcatgcccgatcttcatgtactttgtcaaaatgtttgtcttaatgatatcttggttaagttcaaaagtggttctgatccgttgaaaaacatggccgccagtgggcggggcagttttccttatttggctatagagaaaccttgtaaacactctagaagtaaaaatgtttgtccaatcatcatgaaagttggtcaaaacattggttttattgatatcttggacgagtttgaaaatagtcggcatcagtgaaaaaacatggccgccagtgggcagggcatttttctctttatgtatatagtgaaaacatgtgaacacagaagtcacatttttggcccaattttcatgaaatttgctcagaacatttgtttccttgatacgagagttgagttcaaaaatggttccggtcagatgaataacatggctgctgggaggggggcagttttctcattatgcccccccccccttttgaagaagagggggtatattgtttagctcatgtcggtccatccgtccaccagatggtttctggatgataactcaagagcgcttatgccaaggatcatgaaactccataggtacattgatcatgactcgcagatgccccccattgattttcaggtcacaaggtcaaaggtcaaggtcacgatgacccgaaatagtaaaatggtttccggatgataactcaagaacacttatgcctatgatcatgaaacttcatagatacattgatcatgacttgcagatatccactattgattttcaggtcactaggtcataggtcaaggtcacggtgacccaaagcagtaaaatggtttctggatgattactcaagaacgcttatgcctaggttcataaaacttcatagatacattgatcatgactcgcagataacccatattgattttcaggtcactaggtcaaaggtcaaggtcacgatgacccgaaatagtaaaatggtttccggatgataactcaagaacgcttaggcctaggataatgcaacttcataggtacattgatcataactcgtagatgaccctattgattttcaggtcaaagatctaggtcacgatcacccgaaagagtaaaatgatttccggatgataactcaagaacgcttaggcctaggatcatgaaacttcataggtacattgatcatgactggtagatgacccctattgattttcaggtcactaggtccaaggtcagggtgacctgaaatagtaaaatggttttcagatgataactcaagaacgcttatgcctagtatcatgaaactgcaaaggtacaacgatcatgactcgcagatgacccctattgattttcaggtcactaggtcaaaggttaaggtcacggtgacctgaaatagtaaaatggtttttggatgataactcaagaacgcttatgcctaggttcatgaaacttgataggtatattgatcatgactcgcagatgacccctattgattatcaggtcactaggtcaaagatcaaggtcacagtgccaaaaaacgtagtcacacaatggctgtcaaggtcacagtgactcaacttagaaaaatggttttcggatgataactcaagaatgcttacgcctaggatcatgaaacttcataggtacattgatcatgactcgcagatgaaataatgatgaaacttgaccaggatgtttgtctgaacaatatctaggtcaagtttgacatttggtaaagattgaatgaacagactcctctcaggtgagctaactagggccatcttggccctcttgtctacaatttgtgagttttgttcgtacatgaaatctttctgatccgtttaatgatttattatttacaataaattcatattccattta
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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