LOCUS       XM_067511438            4643 bp    mRNA    linear   VRT 20-AUG-2024
DEFINITION  PREDICTED: Channa argus argonaute RISC component 1 (ago1),
            transcript variant X3, mRNA.
ACCESSION   XM_067511438
VERSION     XM_067511438.1
DBLINK      BioProject: PRJNA1148499
KEYWORDS    RefSeq.
SOURCE      Channa argus (northern snakehead)
  ORGANISM  Channa argus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Anabantaria; Anabantiformes; Channoidei;
            Channidae; Channa.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_090203) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033026475.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/16/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4643
                     /organism="Channa argus"
                     /mol_type="mRNA"
                     /isolate="prfri"
                     /db_xref="taxon:215402"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="muscle"
                     /dev_stage="adult"
                     /geo_loc_name="China: Weishanhu"
                     /collection_date="2021-12-20"
     gene            1..4643
                     /gene="ago1"
                     /note="argonaute RISC component 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:137130834"
     CDS             185..2065
                     /gene="ago1"
                     /codon_start=1
                     /product="protein argonaute-1 isoform X3"
                     /protein_id="XP_067367539.1"
                     /db_xref="GeneID:137130834"
                     /translation="

MCEVLDIRNIDEQPKTLTDSQRVRFTKEIKGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLESGQTVECTVAQYFKQKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKATARSAPDRQEEISRLMKNANFNLDPYIQEFGIKVKDDMAEVTGRVLPAPILQYGGRNRAIATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKNFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRSAVFQQPVIFLGADVTHPPAGDGKKPSITAVVGSMDAHPSRYCATVRVQRPRQEIIEDLSYMVRELLIQFYKSTRFKPTRIIFYRDGVPEGQLPQILHYELLAIRDACIKLEKDYQPGITYIVVQKRHHTRLFCADKSERIGKSGNIPAGTTVDTSITHPFEFDFYLCSHAGIQGTSRPSHYYVLWDDNRFTADELQILTYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKEHDSGEGSHVSGQSNGRDPQALAKAVQIHHDTLRTMYFA"

     misc_feature    185..526
                     /gene="ago1"
                     /note="PAZ domain, argonaute_like subfamily. Argonaute is
                     part of the RNA-induced silencing complex (RISC), and is
                     an endonuclease that plays a key role in the RNA
                     interference pathway. The PAZ domain has been named after
                     the proteins Piwi,Argonaut, and Zwille; Region:
                     PAZ_argonaute_like; cd02846"
                     /db_xref="CDD:239212"
     misc_feature    order(320..322,365..367,407..409,419..421,473..475,
                     494..496,500..502)
                     /gene="ago1"
                     /note="nucleic acid-binding interface [nucleotide
                     binding]; other site"
                     /db_xref="CDD:239212"
     misc_feature    659..1936
                     /gene="ago1"
                     /note="PIWI domain, Argonaute-like subfamily. Argonaute is
                     the central component of the RNA-induced silencing complex
                     (RISC) and related complexes. The PIWI domain is the
                     C-terminal portion of Argonaute and consists of two
                     subdomains, one of which provides the...; Region:
                     Piwi_ago-like; cd04657"
                     /db_xref="CDD:240015"
     misc_feature    order(1070..1072,1082..1084,1118..1129,1136..1138,
                     1160..1162,1169..1171,1181..1183,1193..1195)
                     /gene="ago1"
                     /note="5' RNA guide strand anchoring site [active]"
                     /db_xref="CDD:240015"
     misc_feature    order(1274..1276,1280..1282,1490..1492,1904..1906)
                     /gene="ago1"
                     /note="active site"
                     /db_xref="CDD:240015"
     polyA_site      4643
                     /gene="ago1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

attttcaaggtgtctatccgttggctggccaaggtgtcatggcgcctgttgcaggagactctgatcagtggacgcctgcaagttcccctggactcggttcaagccttggacgtagccatgcgccacctggcctctatgagtgtcagccacagccttttacaaagcccagcctgtaatcgagttcatgtgtgaggttctggacattcgcaacatcgatgagcagcccaagactctcactgactcgcaaagggtccgcttcaccaaggaaattaaaggtttgaaggtggaagtaactcattgcggtcaaatgaagaggaagtaccgtgtatgcaatgtaacccgacgtcctgccagccaccagacgtttcccctccagcttgagagtgggcagacagtagaatgtacagtggcccagtacttcaagcagaagtacaatctgcagctaaaatacccccacctaccctgtctacaggtggggcaagagcagaagcacacctacctgcccctggaggtgtgtaacattgtagcaggtcaacggtgcatcaaaaaactgacagataatcagacctccactatgatcaaagcaacggctcgatctgcgcccgacagacaagaggagatcagcaggctgatgaagaacgctaacttcaacctggacccatacatccaagagtttgggatcaaggtgaaagatgatatggctgaggtgacgggcagagtgctccccgcccctatcctgcagtatggaggacggaaccgtgccatagcaaccccaaaccagggagtgtgggacatgagggggaagcagttttataatggcattgagatcaaagtgtgggccattgcctgctttgccccccagaaacagtgcagagaagaggtgcttaaaaacttcacagatcagctgcgtaagatttctaaggatgctgggatgccgattcagggtcagccatgcttctgtaaatatgcccagggagcagacagtgttgagcccatgttcagacacctgaagaacacctactctggactgcagctcatcattgttatcctaccaggaaaaacccctgtctatgctgaggtaaaacgtgtaggagacactttacttggtatggccacgcaatgtgttcaggtgaaaaatgtagtaaagacatcacctcagaccctctccaacctctgcctcaagattaacgtgaaacttggcggcatcaacaacatcctggtacctcaccaacggtcagcagtgtttcagcagccagttatcttcctgggagcagacgtcacacatccccctgccggagatggaaagaagccctctattactgctgtggtaggcagtatggatgctcatcccagcagatattgtgccacagtgcgagtccagagacccaggcaagagatcattgaggatctgtcatacatggtgcgtgaactgctaattcagttctacaagtcgacccgatttaagcccaccaggatcattttctacagagatggagttcctgaaggacagttaccgcagattctccactacgagctcctggccatccgagatgcatgcatcaaactggagaaagactatcagccaggcatcacctacatcgtggtgcagaaacgccaccacacacgcctcttctgtgctgacaagtctgaaaggattggaaagagtgggaatattcctgcaggaactacagtggacaccagcatcactcatccctttgagtttgacttctacctgtgcagccatgcaggcatacagggtaccagccggccgtctcattattacgtcctttgggacgacaatcgcttcacggctgatgagttgcagattttaacttaccagttgtgccacacttatgtgcgttgtacccgctcggtctccatccctgctccagcctactatgctcgtcttgtggccttccgagcccgctaccatctggtggacaaagaacatgacagtggagagggcagtcatgtgtctggtcagagtaatggtcgggacccccaggcactggccaaagctgttcagattcaccacgacaccctgaggaccatgtacttcgcctgagccacaccaagcatcaccaccatctatccctcccacctcatttctacctgagtgagcagaaagctcaccagcaccacctcatcctcatcccttattcccagtgactgcccactacacttactttacaaccttgccagtcactcacccaaatccaggaaccataggcccttcagctgtacggcagagtctacagcctcatgcactcaaaaggttatgaatattcttattgttgtcattttgttgtttttactttaccaggactattgttctttttatgttgaatttttaaaatgtgggtattattatgtattgtattgtacgctaccttcacactcctatgtatgtaagtatgcaatatggataggaggaagatgggcgttaaaaagaaaaaaaaatcctgaaaacttttttaactgccaccacgatgctgcctctttacctatccaagcgccagactccagtgttccaagcccctcgaatatggggatcctccagaggggtggtactgagcacgcacacttacatgtatcattttaatgttgtcatgaactacattcatgttttttaatgattttgaataatgttgttttttttaaacagccttgaggaacctgaggtatggtacattagcacttagtgttagcatgtaggtgccaccagtcctacacaaagagttagtacatgtgaggctagccctccagtctttatattagcaaagacagaaagagcaggtgtagcatatcatagacacagcagagaagtcccaccgcactctctgtgctggttggccagtcccttagagatttagcctatagcggcaagcttagcataacaatagagggaacatttgcatagagtgtatcaaatatacttgcaccccatgcacctaaaccagcattattaaccagccaaacatgatgccaaccaataaaaaaggggcacttaaacaggaagataatctttgatttctgtatgcattgctcctttaggatacacgaggcacttttttttttttttttttttagttattgatttttgtttacttcaaaatggtgagacttgtccttaggcttgacactaacactaccttgacgttttcacacccacactctcatagctaacaaagaggtaactaaggcaataggcaaggtcaacactcctctgtagatttgaatacaggcaaatatagcctgtgatcacttaagtgctgcaaagctgaactcatattcagcaactgaccttgctctgatcattctgaacattccaacatgtatcagatgacgccaacttccacccacgcacttctttgcgtacctatacaaacctattctgcacctattctattccattccattccatttttacacagagctcttccctctgcaggcatttactgctcattgcctggatagcagaagcacacacacatcttgtgccctcttagtctctttttaagcacgtagagaccaacctcttcaaatgcacttgtccactccaaccctgcctaatccatccccctgtccatcatgcccttctatccttcccatttgttacttttgacatgcagcatctccttcaaccaatcccctagattgtgttagccaatttccattggtgctctgtgtgcatgggcggcacagataggggattgctacattggataagatgggccagtgttactactacttaatatgcccattctttacatctagtgaatttctggattattgaaaaaaatgcatgtaattattttttatgactggatattctgagccaccttatttgggttttcttagaggtaggagccttgcgctcaccactgcctgtcagtcgttttgcctcgattgtgtaatagttataaagactgctttttttctttgtcattattaatatgaatattgtgacttgtgtcaagagtgtatcctctagagggcactgtggagacagtctcaaaattccacctcagttgccctttaaagcgcctcaaatcttgtctgacggtcagggcccctttgagatgaaagatcagataagttagatttttaaatcatgtttatgaacgtgcataatcaaaatgcctttgtacaccgttttactgatccttcattgtgtccaaggtgatttgtatatatataatattaacctgtaatgtattttggcccaccagttgctgggtccttcacagttgggggacagtgttctacccctcattctttgcttaaaacaaactaactaactaaaaaaaaaaatcagtctgggatcatttcccagtacaactgaaaccagatgcagttcttcactcactgaagtcacaaagcaccttgcaaagggggaagacgaaatggcagtcaccctggaaatgcatcatgtggacaccggagagtccactcctctcctcacatcctcactgactaagcaatattgaagccactgatcaagaacagtccttgtcatagcacttcccaatagatttgaatgaaatgagattgaagcatactattttggctctgtatgtgatagtatgggaactctgttggggagggttattttttaaataaaataaatttgttttttatta

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