2024-11-23 18:35:14, GGRNA.v2 : RefSeq release 226 (Sep, 2024)
LOCUS XM_065921182 1886 bp mRNA linear MAM 22-JUN-2024 DEFINITION PREDICTED: Muntiacus reevesi vimentin (VIM), mRNA. ACCESSION XM_065921182 VERSION XM_065921182.1 DBLINK BioProject: PRJNA1126686 KEYWORDS RefSeq. SOURCE Muntiacus reevesi (Reeves' muntjac) ORGANISM Muntiacus reevesi Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Muntiacinae; Muntiacus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_089250) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963930625.1-RS_2024_06 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 06/21/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1886 /organism="Muntiacus reevesi" /mol_type="mRNA" /db_xref="taxon:9886" /chromosome="2" gene 1..1886 /gene="VIM" /note="vimentin; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins" /db_xref="GeneID:136159226" CDS 165..1565 /gene="VIM" /codon_start=1 /product="vimentin" /protein_id="XP_065777254.1" /db_xref="GeneID:136159226" /translation="
MSTRSVSSSSYRRMFGGPGTASRPSSTRSYVTTSTRTYSLGSALRPSTSRTLYTSSPGGVYATRSSAVRLRSGVPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDKVRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLTEDIMRLREKLQEEMLQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHDEEIQELQAQIQEQHVQIDMDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSEAANRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFSVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPNFSSLNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE"
polyA_site 1886 /gene="VIM" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN
cgcgcggggtccggtcctctgctactctcgcttcgggggtctccgcgccagagacgcagcagcgctccctctgcccacacccaccgcgccctcgcgctcgcctctcctcccggagccagtccgtgctaccgcagtcgcccagttcaccgccaccctctgcagccatgtccaccaggtccgtgtcctcgtcctcctaccgcaggatgttcggcggccccggcaccgcgagccggccgagctccacccggagctacgtgaccacgtccacccgcacctacagcctgggcagcgcgctgcgcccctccaccagccgcaccctctacacctcgtcccccggtggcgtgtacgccacgcgctcctcggccgtgcgcctgcggagcggcgtgcccggcgtgaggctgctgcaggactcggtggacttctccttggccgacgccatcaacaccgagttcaagaacacccgcaccaacgagaaggtggagctgcaggagctcaatgaccgcttcgccaactacatcgacaaggtgcgcttcctggagcagcagaacaagatcctgctggccgagctcgagcagctcaagggccagggcaagtcgcgcctgggggacctctacgaggaggagatgcgagagctgcgccggcaggtggaccagctcaccaacgacaaggcccgcgtcgaggtggagcgcgacaacctgaccgaagacatcatgaggcttcgggagaagttgcaggaggagatgcttcagagggaggaagccgagagcactctgcagtctttcagacaggatgttgacaatgcctctttggcacgtcttgacctggagcgtaaagtggaatccttgcaagaagagattgcctttttgaagaaactgcatgatgaggaaatccaggagcttcaggcccagattcaagaacagcacgtgcaaatcgatatggatgtttccaagcctgacctcacggctgccctgcgtgatgtccgtcagcagtatgagagtgtggccgccaagaaccttcaggaggctgaggaatggtacaagtccaagtttgctgacctctctgaagctgctaaccgcaacaatgatgccctgcgccaggccaagcaggagtcgaatgagtaccgtcggcaggtgcagtctcttacctgcgaggtggatgcgctcaaagggactaacgagtctctggaacgccagatgcgtgaaatggaagagaacttctctgtggaagctgctaactaccaagacactattggccgcctgcaggatgagattcagaacatgaaggaagagatggcccgtcacctgcgtgaataccaagacctgctgaatgtcaagatggcgctcgacatcgagatcgccacctacaggaagctgctggaaggagaggagagcaggatttctctgcctcttccaaacttttcttccctgaacctgagggaaaccaatctggattcactccctctggttgacacccattcaaaaaggacacttctgattaagacggtggaaaccagagatggacaggttatcaacgaaacttcccagcatcacgatgatctggaataaaaactgcacatactccgtgcagcaaaatactaccagcaagaaggaaaaaaaaaaaattcatatcttaaagaaacagctttcaagtgcctttctgcagttttttcaggagcgcaagatagatttggaataggaataagccctagttcttgaaccaacacccgtaaaagatttagagaaaagtttacaacataatctagtttaccgaagaagccttgtgctagaatactttttaaaaagtatttttgaataccattaaaactgcttttttccatcaagtatctgaccaacttgtttctgcttcaataaatctttggaaaactc
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@meso_cacase at
DBCLS
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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