LOCUS       XM_059020041            3334 bp    mRNA    linear   VRT 18-AUG-2023
DEFINITION  PREDICTED: Acipenser ruthenus protein argonaute-1 (LOC117968115),
            transcript variant X3, mRNA.
ACCESSION   XM_059020041
VERSION     XM_059020041.1
DBLINK      BioProject: PRJNA1003472
KEYWORDS    RefSeq.
SOURCE      Acipenser ruthenus (sterlet)
  ORGANISM  Acipenser ruthenus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae;
            Acipenser.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026708149) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_902713425.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/10/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3334
                     /organism="Acipenser ruthenus"
                     /mol_type="mRNA"
                     /db_xref="taxon:7906"
                     /chromosome="Unknown"
     gene            1..3334
                     /gene="LOC117968115"
                     /note="protein argonaute-1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:117968115"
     CDS             406..2778
                     /gene="LOC117968115"
                     /codon_start=1
                     /product="protein argonaute-1 isoform X3"
                     /protein_id="XP_058876024.1"
                     /db_xref="GeneID:117968115"
                     /translation="

MGWNRGRLEPGWQVPSCPSSCSRCFRLLAGRGSAPSGSPSGCWQTTSRWRSPRWTCTTTRWTSSQRSVPGASTGRWWSTWCSIYLSLYLSVAPCREVVEYMVQHFKPQIFGERKPVYDGKRNIYTVTALPIGNEQVDFEVTIPGEGKDRIFKVSIKWVAMVSWRLLHDALVSGRVPVPLDSVQALDVAMRHLSSMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQSVRPAMWNMMLNIDVSATAFYKAQPVIEFMCEVLDIRNIAEQPRSLSDSQRVRLTKEIKGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLENGQAMECTVAQYFKQKYSLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKATARSAPDRQEEISRLMKNGSYNLDPYIQEFGIKVKDDMVEVTGRVLPAPILQYGGRNRAVATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKGFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINAKLGGINNILVPHQRSAVFQQPVIFLGADVTHPPAGDGKKPSITAVVGSMDAHPSRYCATVRVQRPRQEIIQDLASMVRELLIQFYKSTRYKPTRIIFYRDGVPEGQLPQILHYELLAIRDACIKLEEEYQPGITYIVVQKRHHTRLFCADRSERIGKSGNIPAGTTVDTSITHPFEFDFYLCSHAGIQWGRQPHLRAE"

     misc_feature    748..972
                     /gene="LOC117968115"
                     /note="N-terminal domain of argonaute; Region: ArgoN;
                     pfam16486"
                     /db_xref="CDD:435368"
     misc_feature    1000..1152
                     /gene="LOC117968115"
                     /note="Argonaute linker 1 domain; Region: ArgoL1;
                     pfam08699"
                     /db_xref="CDD:430160"
     misc_feature    1153..1515
                     /gene="LOC117968115"
                     /note="PAZ domain, argonaute_like subfamily. Argonaute is
                     part of the RNA-induced silencing complex (RISC), and is
                     an endonuclease that plays a key role in the RNA
                     interference pathway. The PAZ domain has been named after
                     the proteins Piwi,Argonaut, and Zwille; Region:
                     PAZ_argonaute_like; cd02846"
                     /db_xref="CDD:239212"
     misc_feature    order(1309..1311,1354..1356,1396..1398,1408..1410,
                     1462..1464,1483..1485,1489..1491)
                     /gene="LOC117968115"
                     /note="nucleic acid-binding interface [nucleotide
                     binding]; other site"
                     /db_xref="CDD:239212"
     misc_feature    1648..2745
                     /gene="LOC117968115"
                     /note="PIWI domain, Argonaute-like subfamily. Argonaute is
                     the central component of the RNA-induced silencing complex
                     (RISC) and related complexes. The PIWI domain is the
                     C-terminal portion of Argonaute and consists of two
                     subdomains, one of which provides the...; Region:
                     Piwi_ago-like; cd04657"
                     /db_xref="CDD:240015"
     misc_feature    order(2059..2061,2071..2073,2107..2118,2125..2127,
                     2149..2151,2158..2160,2170..2172,2182..2184)
                     /gene="LOC117968115"
                     /note="5' RNA guide strand anchoring site [active]"
                     /db_xref="CDD:240015"
ORIGIN      

ggggcgctgtgaggattcggtaccgtttccaggcagcgcaggagagaaggaggattgtttcgttgctctgtctttgttcagcagcttggaggctcttgcgcggagagagacgagctgacaaacccgagctgggaggctagatctccgaacagcaaagccatcgagtccgagcagacgagactgcaccgccgagcgcagcaagacgaggggggcgtgcagcgagagctgccgggcttgtagctgtacgctcaccggacacggggtctaggggctccgagaggggacgggggacggaaaagggggtctcgcttgaaggcgcagacaggaggcggggtgcagtgttgatgcgataatattattttataaaattccgaaattctccggagcggctcagcggcagagtgtatgggatggaaccggggacgcctggagccgggctggcaggtcccttcctgccccagcagctgcagcaggtgtttcaggctcctcgccggccggggctcggctccatcgggaagcccatcaggctgctggcaaactacttccaggtggagatccccaagatggacgtgcaccactacgaggtggacatcaagccagagaagtgtccccggcgcgtcaacagggaggtggtggagtacatggtgcagcatctatctgtctctctatctctctgtcgccccctgcagggaggtggtggagtacatggtgcagcatttcaaaccccagatcttcggcgagaggaagccggtctacgatggaaagaggaacatctacacagtgacagcgctgcccatcggcaacgagcaggtggatttcgaggtgacgatccctggtgaagggaaggaccggatattcaaggtgtcgataaagtgggtggcgatggtgagctggcggctgctgcacgacgccctggtcagtggccgggtcccagtcccgctggactctgtgcaggcgctggacgtggccatgcggcacctctcctccatgaggtacactccagtggggcgctccttcttctcccctcccgaggggtactatcacccgctgggcgggggcagggaggtgtggtttgggttccaccagtccgtgcggcccgccatgtggaatatgatgctgaacatcgacgtgtcggccactgcgttttacaaagcccagcctgtgattgagttcatgtgtgaggtgctggatatccgcaacatcgccgagcagccccgatccctcagcgattctcagagggtgcgactcacaaaggaaatcaaaggcctgaaggtggaggtgactcactgtgggcagatgaagaggaaataccgagtgtgcaacgtgacccgtcggcccgccagccaccagacgttccctttgcagctggagaacggccaggcaatggagtgcacggtggctcagtacttcaaacagaagtacagcctgcagctcaagtacccgcacctgccctgcctgcaggtgggccaggagcagaagcacacctacctgcccctggaggtgtgtaacatcgtagcggggcagcgctgtatcaagaaactgacggataatcagacttccaccatgatcaaagcgaccgcgcgctcagcacccgacaggcaggaggagatcagcaggctgatgaaaaatggcagctacaatctggacccgtacatccaggagttcgggatcaaggtgaaggatgacatggtggaggtgacgggcagagtgctgccagcacccatcctgcagtacggaggcaggaaccgagccgtcgccacccccaaccagggcgtgtgggacatgcgggggaagcagttctacaatggcatcgagatcaaggtgtgggccatcgcctgcttcgctccgcagaaacagtgtcgcgaggaggtgctcaagggcttcactgaccagctgcgcaagatctccaaggacgcggggatgcctatccagggccagccctgcttctgtaaatacgcgcagggtgctgacagcgtggagcccatgttccgccacctgaaaaacacctattcagggctgcagctcatcatagtcatcctgcccgggaaaacgcccgtctacgcggaggtgaagcgtgtgggagacactctcctgggaatggccactcagtgcgttcaggtgaagaatgtggtgaagacctccccccagaccctctccaacctctgcctgaaaatcaacgccaagctggggggcattaacaacatcctggtcccgcaccagcgctctgcagtgttccagcagcctgtgatcttcctgggcgctgatgtcacgcacccccctgcaggcgacggcaagaagccctcgattactgcggtggtggggagcatggacgctcaccccagccgatactgtgccacggtgagagtacagcgcccccggcaggagatcatccaggacctggcctccatggtgcgggagctgctcatccagttctacaagtcgacccgctacaagcccaccaggatcatcttctacagagacggggtgccggaggggcagctcccacagatcctgcactatgagctgcttgctatcagagatgcctgcatcaagctggaggaggagtaccagcctggcatcacctacatcgtggtgcagaagcgccaccacacccggctcttctgtgccgaccggagcgagaggattgggaaaagtgggaatataccagcgggaacgacagtggacaccagcatcacacacccgtttgagtttgacttctacctgtgcagccatgcagggatacagtggggaaggcagccacatctcagggcagagtaacgtccgagacccccaggctctagccaaggcagtgcaggtgcaccaggacacgctgcggaccatgtacttcgcctgaacggagccccttccctcacacagagccccagaggcctgtccctgtccctccacagccagggggctgcctctgtacagacagcaaggatccagggagcgggatcgtcttccaagagaacaagcaaaaccttttcatcattcagctacttctgttgttttatatttccacacgagtctgtatgcaatattgaagaaaggagtccttgactgtcgacgcacgcacacacacacatacacaatgacacacgcacacacacacactgacacacacacacacacacacacacacacacactgacacacacacacacacagggtctcgaccacagactgcgttctcttctctggtgagcttcgggaacattttaacgcagcactttcctttagatgtagctgttaagtgttgttgttgatattttattgtagctctggtgtgaggcccaagagcgtgtagggtagaagtagcctccggaggggggag

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