2024-04-29 06:18:22, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_055512421 1151 bp mRNA linear VRT 24-APR-2023 DEFINITION PREDICTED: Betta splendens vimentin-related 2 (vimr2), transcript variant X3, mRNA. ACCESSION XM_055512421 VERSION XM_055512421.1 DBLINK BioProject: PRJNA522468 KEYWORDS RefSeq. SOURCE Betta splendens (Siamese fighting fish) ORGANISM Betta splendens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Anabantiformes; Anabantoidei; Osphronemidae; Betta. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_040890) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_900634795.4-RS_2023_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/21/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1151 /organism="Betta splendens" /mol_type="mRNA" /db_xref="taxon:158456" /chromosome="10" gene 1..1151 /gene="vimr2" /note="vimentin-related 2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:114863888" CDS 61..999 /gene="vimr2" /codon_start=1 /product="peripherin isoform X3" /protein_id="XP_055368396.1" /db_xref="GeneID:114863888" /translation="
MAMLRVSSYRKLFEQDAWRRNAGLRMPRGAALDKCDRDTFDFVAAKSLGEDGLKLLAQERRTIAALNDRLVKLIELARRLEEENGSLECQIAELEAQPSSAPASVSISTAVAQADRSLDAVVERLRRERDEIVCESRALQDELEGLMREHEEAARRRSSVQQERQHVAAEVDAVTAECLALRERVRVYAAQRANVEAQRTAAAERLLEPADGSTPAVAAIKFGSPAVTAALGVKEYYCRLAESLQCVVAAAAVVCGGDAEQRDVRGAGRSVVRDWPATKDAGDMKTLLPRRPSNFPRMQFPHLHCQEKSRRK"
ORIGIN
acctgtcgcctctgttcgcctgctgtttcgttgaagatcagttcaaagtcgcccggagccatggccatgctcagagtgtcgtcctaccgcaagctgtttgaacaagacgcctggaggcgaaatgcggggctgaggatgcccaggggcgcggctcttgacaaatgcgaccgtgacacgttcgactttgtcgctgccaagtctctcggcgaggacggcctgaagctgttggcccaggaacgccgcaccatcgccgccctcaacgaccggctggtcaagctcatcgagctggctcggcgcttggaggaggagaacgggtctcttgaatgtcagattgcggagctggaggcgcagccgagcagtgcccccgcctccgtcagcatcagcaccgcggtggctcaggccgaccgctctctggatgcggtggtggagaggctgcgcagggaaagggatgagattgtgtgcgagtctagagcgctgcaggacgagctggagggtctgatgagggagcacgaggaggccgcacgcaggaggagctcagtccagcaggaacgtcagcacgttgctgcggaggtggatgccgtgacggcggagtgtctggcgttgagggagcgggtgcgtgtctacgcggcgcagcgagccaacgtggaggcccagcgcacggcggcggccgagcgtctgctggagcccgctgacgggtccacgccggcggtggcagccattaaattcggcagccctgccgtcaccgcggccttgggtgtaaaggagtattactgccggctggcggagagcctccagtgcgtcgtggctgccgccgctgtggtttgtggtggtgatgcagagcagcgggatgtgagaggagctgggaggtcggtggtcagagactggccggcgacgaaggacgctggtgacatgaagacgctgctcccgcgtcgtccttcaaattttcccaggatgcagttcccacatcttcactgccaagagaaaagtcgccgtaaatgatacgagtggttcttcatcggccatcagctcctaaatcagaggtctctgagctacaaaaggagtttgctgagctcgaacagcgcaacgaggagctggaggacgaggctgaaatgaagagggctgcgcacatggaagaggtagcggagttggag
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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