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2024-04-29 06:18:22, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_055512421            1151 bp    mRNA    linear   VRT 24-APR-2023
DEFINITION  PREDICTED: Betta splendens vimentin-related 2 (vimr2), transcript
            variant X3, mRNA.
ACCESSION   XM_055512421
VERSION     XM_055512421.1
DBLINK      BioProject: PRJNA522468
KEYWORDS    RefSeq.
SOURCE      Betta splendens (Siamese fighting fish)
  ORGANISM  Betta splendens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Anabantaria; Anabantiformes; Anabantoidei;
            Osphronemidae; Betta.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_040890) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_900634795.4-RS_2023_04
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 04/21/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1151
                     /organism="Betta splendens"
                     /mol_type="mRNA"
                     /db_xref="taxon:158456"
                     /chromosome="10"
     gene            1..1151
                     /gene="vimr2"
                     /note="vimentin-related 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:114863888"
     CDS             61..999
                     /gene="vimr2"
                     /codon_start=1
                     /product="peripherin isoform X3"
                     /protein_id="XP_055368396.1"
                     /db_xref="GeneID:114863888"
                     /translation="
MAMLRVSSYRKLFEQDAWRRNAGLRMPRGAALDKCDRDTFDFVAAKSLGEDGLKLLAQERRTIAALNDRLVKLIELARRLEEENGSLECQIAELEAQPSSAPASVSISTAVAQADRSLDAVVERLRRERDEIVCESRALQDELEGLMREHEEAARRRSSVQQERQHVAAEVDAVTAECLALRERVRVYAAQRANVEAQRTAAAERLLEPADGSTPAVAAIKFGSPAVTAALGVKEYYCRLAESLQCVVAAAAVVCGGDAEQRDVRGAGRSVVRDWPATKDAGDMKTLLPRRPSNFPRMQFPHLHCQEKSRRK"
ORIGIN      
acctgtcgcctctgttcgcctgctgtttcgttgaagatcagttcaaagtcgcccggagccatggccatgctcagagtgtcgtcctaccgcaagctgtttgaacaagacgcctggaggcgaaatgcggggctgaggatgcccaggggcgcggctcttgacaaatgcgaccgtgacacgttcgactttgtcgctgccaagtctctcggcgaggacggcctgaagctgttggcccaggaacgccgcaccatcgccgccctcaacgaccggctggtcaagctcatcgagctggctcggcgcttggaggaggagaacgggtctcttgaatgtcagattgcggagctggaggcgcagccgagcagtgcccccgcctccgtcagcatcagcaccgcggtggctcaggccgaccgctctctggatgcggtggtggagaggctgcgcagggaaagggatgagattgtgtgcgagtctagagcgctgcaggacgagctggagggtctgatgagggagcacgaggaggccgcacgcaggaggagctcagtccagcaggaacgtcagcacgttgctgcggaggtggatgccgtgacggcggagtgtctggcgttgagggagcgggtgcgtgtctacgcggcgcagcgagccaacgtggaggcccagcgcacggcggcggccgagcgtctgctggagcccgctgacgggtccacgccggcggtggcagccattaaattcggcagccctgccgtcaccgcggccttgggtgtaaaggagtattactgccggctggcggagagcctccagtgcgtcgtggctgccgccgctgtggtttgtggtggtgatgcagagcagcgggatgtgagaggagctgggaggtcggtggtcagagactggccggcgacgaaggacgctggtgacatgaagacgctgctcccgcgtcgtccttcaaattttcccaggatgcagttcccacatcttcactgccaagagaaaagtcgccgtaaatgatacgagtggttcttcatcggccatcagctcctaaatcagaggtctctgagctacaaaaggagtttgctgagctcgaacagcgcaacgaggagctggaggacgaggctgaaatgaagagggctgcgcacatggaagaggtagcggagttggag
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]