LOCUS       XM_052941173            3871 bp    mRNA    linear   INV 13-JAN-2023
DEFINITION  PREDICTED: Mya arenaria endonuclease 8-like 3 (LOC128229319),
            transcript variant X2, mRNA.
ACCESSION   XM_052941173
VERSION     XM_052941173.1
DBLINK      BioProject: PRJNA918361
KEYWORDS    RefSeq.
SOURCE      Mya arenaria
  ORGANISM  Mya arenaria
            Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia;
            Autobranchia; Heteroconchia; Euheterodonta; Imparidentia;
            Neoheterodontei; Myida; Myoidea; Myidae; Mya.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_069124) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_026914265.1-RS_2023_01
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3871
                     /organism="Mya arenaria"
                     /mol_type="mRNA"
                     /isolate="MELC-2E11"
                     /db_xref="taxon:6604"
                     /chromosome="3"
                     /sex="female"
                     /tissue_type="Siphon/mantle"
                     /geo_loc_name="USA: Larrabe Cove, Machiasport, ME"
                     /collection_date="2018-06-01"
     gene            1..3871
                     /gene="LOC128229319"
                     /note="endonuclease 8-like 3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:128229319"
     CDS             1..1509
                     /gene="LOC128229319"
                     /codon_start=1
                     /product="endonuclease 8-like 3 isoform X2"
                     /protein_id="XP_052797133.1"
                     /db_xref="GeneID:128229319"
                     /translation="

MVEGPGCKLKGIKIKAKIKGQCVKRVGGNAVDKFKKKDVGAASPFHQLIGRHLEDVQTLGKELFMYFGDICLRVHFLMDGQSFINNAKVDNDSGGRTETATLELHMSEDVLTFKKSSVDIRPSVPCRQKYETMNDVDICSPVFNFRRAFSLVREQTDRQVCDVLLDQSILPGVGNIIKNEALFDSGIKPSSKIGELKDEHIRHLLKMTRDFTDIFYRCRRDGKQLSPYYKIYGKRLCKQCEGRVIICRLGDDSGRVTYFCENCQTNDLVNKNRKLPSKNSLLGWVQTGSHISQPEIADWSCEHCTLINKDTATSCSACLNPRVDKTVEAKPAQFGAKGHVSGQGNQTMNRKRKTEDSGVEQTRAKTQKINTSVVKLENKTGFKTKIPQNGSAKTNKTQNGTTKEQSDKSRIPMCEHHKRKCSMKEVRKEGQNLGRWFFSCVVRSCNFFQWADVNFPTCTDHGKPCTIRTVLKIGPNNGKRFFTCKLPKKKQCKFFEWAIGYD"

     misc_feature    1..399
                     /gene="LOC128229319"
                     /note="N-terminal domain of Fpg (formamidopyrimidine-DNA
                     glycosylase, MutM)_Nei (endonuclease VIII) base-excision
                     repair DNA glycosylases; Region: FpgNei_N; cl03119"
                     /db_xref="CDD:470740"
     misc_feature    order(4..9,181..183,223..225,229..237,283..285,295..297)
                     /gene="LOC128229319"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176798"
     misc_feature    4..6
                     /gene="LOC128229319"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:176798"
     misc_feature    order(7..18,22..27,31..33,172..186)
                     /gene="LOC128229319"
                     /note="H2TH interface [polypeptide binding]; other site"
                     /db_xref="CDD:176798"
     misc_feature    order(7..9,181..183)
                     /gene="LOC128229319"
                     /note="putative catalytic residues [active]"
                     /db_xref="CDD:176798"
     misc_feature    136..792
                     /gene="LOC128229319"
                     /note="Formamidopyrimidine-DNA glycosylase [Replication,
                     recombination and repair]; Region: Nei; COG0266"
                     /db_xref="CDD:440036"
     misc_feature    892..963
                     /gene="LOC128229319"
                     /note="Zinc finger domain; Region: ZnF_RBZ; smart00547"
                     /db_xref="CDD:197784"
     misc_feature    895..954
                     /gene="LOC128229319"
                     /note="RanBP2-type Zn finger [structural motif]; Region:
                     RanBP2-type Zn finger"
                     /db_xref="CDD:275376"
     misc_feature    1234..1356
                     /gene="LOC128229319"
                     /note="GRF zinc finger; Region: zf-GRF; cl46396"
                     /db_xref="CDD:480736"
     misc_feature    1366..1494
                     /gene="LOC128229319"
                     /note="GRF zinc finger; Region: zf-GRF; pfam06839"
                     /db_xref="CDD:462017"
ORIGIN      

atggtagaaggtccaggttgcaagttaaagggcataaaaattaaagccaaaatcaagggtcaatgtgttaaaagagtaggaggcaatgctgttgacaagttcaagaagaaggatgtgggcgctgcttctccatttcatcagctgattggtcgacatctggaagatgttcagacactcgggaaagaattgttcatgtactttggagatatctgcttacgggttcattttctgatggatggccagtcatttatcaacaatgcgaaggttgacaatgattctggtgggaggactgagacagccacgctggaactacacatgtcggaggatgtacttacgttcaagaagtcttcagtggatatcaggccatcggtcccctgtaggcagaaatacgagacaatgaatgatgttgacatatgttccccagtgttcaacttccgacgcgcattctctcttgtacgtgaacaaacggacagacaggtgtgtgatgtgctcctggaccagtccattctgccaggggtcggcaacatcatcaagaatgaggccttgtttgacagtggcataaaaccaagctcaaagattggggagcttaaggatgagcacattcgccacctgctcaagatgaccagggactttacagatatattctaccggtgtcggcgtgatggtaagcagctgtctccatactacaagatttatgggaagcgtctgtgtaaacagtgtgagggcagggtcatcatatgtcgccttggtgatgatagtgggagggtgacctacttctgtgagaactgtcagaccaatgatctggtaaacaaaaacagaaaacttccatctaagaacagtttgcttggctgggtgcagactgggtcccacatttcacaaccggagatagcagactggtcatgtgagcactgtacactcatcaacaaggacactgcaacgtcttgtagtgcctgcctcaaccccagggttgacaaaactgtggaagccaagcctgcacagtttggggctaaagggcatgtttctggacaaggcaatcaaacaatgaacaggaaaaggaaaacagaagactctggtgttgagcaaacaagggcaaaaactcagaaaattaacacaagtgtggtcaagctggaaaacaaaactggttttaaaacaaagatacctcaaaatggatctgcaaaaaccaacaaaacacaaaatggaacaacaaaggaacaaagtgataaaagtaggattccaatgtgtgaacatcacaagcgaaaatgcagcatgaaggaagttcgcaaagaggggcaaaacctgggacgctggttcttttcgtgtgtcgtcaggtcctgtaatttcttccagtgggctgatgtcaattttcctacctgcacagaccatgggaaaccttgtactatacgcactgtgttgaaaataggaccgaataacggaaagaggtttttcacctgcaaactgcccaagaaaaaacaatgcaagttcttcgaatgggcaattggttatgactaagagtggtatattcaatgtatatagacgctgttgtatactcaatacatgggattcatgtccaaatgattttgcagatcagtaggttgtttaaactgcatttccatagggtcactgacgcggcctctctgtcttgataggaaaaatcattcagaatgtatataaaacaaatatcccttttaatgatgcaatgcaatggtgactttattatgccccccttcgaagaagagggatatattgctttgcacatgtcggtcagtccgtccgtccgtcggtagaccaaagcttgtccgagttataactcaacaattcctggaggtatggtgatcaagcttgacatgaaggttgggcctgaccagtagatgacccctattgatttaagggctcatcgggtcaaaggtcaaggtcacagtgacctttaatgataaaataattataaagcttgtccgagtgataactgaacaatgcctgcttccatggctctcaaacttgacatggagattgggcctgaccagtagatgacacctatcgttttggggggtcatcgggccaaaggtcaaagtaacagtggccttgattggttaaagggtgtctgagtgataactctacaatgcctgcacccatggccctcaaacttgacttggaggttgggcctgaccagtagatgacccccagtgatttatgggcacatcgggtcaaaggtcaaggtcacggttaccttaaatgataaaaggttgtcccagtgataactaccatgcctgcacccatggccctcaaacctgaattagaggttgggcctgaccagtagatgacccctattgattatgggggtcatcgggcaaaaagtcaaggtcacagtgaccttgaatgataaagggttgtcagagtgataactctacaatgcctgcactcatggccctcaaacttgacttggaggtaatgtctgaccagaagatgacacctattgattttatggctcatggcctcaaaggtcaaggtcatagtgacctttaatgataaaataactttaaagcttgtccgagtgataactcaacaatgcctagacctatgttcatcaaacttaatatggaagttaggactgaccagtagatgacccctattgttttgggggtcatcgggcaaagggtcaaagtcacagtgaccttggtttgttaaaggatgtctgagtgataactggacaatgcctgctgcacccatggccctcaaacttgacttggaggttgggcctgaccagtagatgacccctatcgattttagggtcatcggatcaaaggtcaacatcagtgaccattaaggcaaacttaacaattcattgacctatgatcatcaaacttgagatgaaggttggccctgactagtagatgacccctattattttgggggtcataggtccagagtttaaggtcacaatgaccttaaatgtgaaaaagttagcaaagcctctcccagtgatatctcaacaatgcctagacctattatcatcaaacttgacatggaggctgggcctgaccagtagatgacccctattgatttcaggagtcatcaaatcaaaggtcaaggtcacagtgaccttaaacgaaaaaagcttgtctgtgtgataacttgacactgcctgaacccatggccttaaacttggaggtccatgcatatttcattcaatcccaaataatcctgacaacatggcactcaggggggggggcataatgtttgacaaacacctcttgtttttaagttgttttaaatattttggacatttcttaacagaaaaatagcagagtacttgttttatgtgttattatcaaacattgttttagccaaagtattgataaaggtcaacagtactaagatatgtttagtgttattttgagtcacacagtgaagctacactctcaatgcaggtttggaatccccgtaccccaaaccccaatgagtggggaagacatattgttttgtcctgtcagtccatacgtcactcgtcaattaagcttactacagagctacagataacttttttacattatattttacacccttatgcattctagtaaagtgtatggtacactcttgggttattcattagtgtaactgcaatttctaaagtgtactgatacattaaattacaaaattgaatgacttattttacttaatgaactttatagtacaaaacaagaacttactcaaaattgaaatgttgctcagctaattataagtcctgattaattaaaacatctttactacatgtactttgctttcttggcttacaaccttctataggtctcttaggatagtgtatcgattttaacaaatcggtttagcatttagtcaaaaccgctggcgtataaca

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