LOCUS       XM_041630879            1807 bp    mRNA    linear   ROD 14-MAY-2021
DEFINITION  PREDICTED: Microtus oregoni vimentin (Vim), mRNA.
ACCESSION   XM_041630879
VERSION     XM_041630879.1
DBLINK      BioProject: PRJNA729470
KEYWORDS    RefSeq.
SOURCE      Microtus oregoni (creeping vole)
  ORGANISM  Microtus oregoni
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Cricetidae; Arvicolinae; Microtus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024543094.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Microtus oregoni Annotation Release
                                           100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1807
                     /organism="Microtus oregoni"
                     /mol_type="mRNA"
                     /isolate="MIOR12"
                     /isolation_source="kidney"
                     /db_xref="taxon:111838"
                     /chromosome="Unknown"
                     /country="USA: Oregon"
                     /lat_lon="45.06 N 124.0 W"
                     /collection_date="2018-08"
     gene            1..1807
                     /gene="Vim"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 36 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 2 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:121432726"
     CDS             97..1497
                     /gene="Vim"
                     /codon_start=1
                     /product="vimentin"
                     /protein_id="XP_041486813.1"
                     /db_xref="GeneID:121432726"
                     /translation="

MSTRSVSSSSYRRMFGGPGTSSRPSSNRSYVTTSTRTYSLGSSLRPSTSRSLYSSSPGGAYVTRSSAVRLRSSMPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDKVRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQEEMLQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHDEEIQELQAQIQEQHVQIDVDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSEAANRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFSLEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPNFSSLNLRETNLESLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE"

     misc_feature    136..399
                     /gene="Vim"
                     /note="Intermediate filament head (DNA binding) region;
                     Region: Filament_head; pfam04732"
                     /db_xref="CDD:428095"
     misc_feature    400..1326
                     /gene="Vim"
                     /note="Intermediate filament protein; Region: Filament;
                     pfam00038"
                     /db_xref="CDD:425436"
ORIGIN      

gggtccggtcctctgccactcttgctcggaccccagagacaacttgctcccacacttgcagccgcagcagccgagtccaccttcgcccccgaaaccatgtccaccaggtccgtgtcctcgtcctcctaccgcaggatgttcggtggccccggcacttcgagccgaccgagttccaaccggagctatgtgaccacgtccacccgcacctacagcctgggcagctcgctacgccccagtaccagccgcagcctctattcctcatcccctggtggcgcctatgtgaccaggtcctctgcggtgcgcctgcggagcagcatgcccggcgtgcggctgctgcaggactcggtggacttctcgctggcagacgccatcaacaccgagttcaagaacactcgcaccaacgagaaggtggaactgcaggagctgaatgaccgcttcgccaactacatcgacaaagtgcgcttcctggagcagcagaacaaaattctgctggccgagcttgagcagctcaagggccagggcaagtcgcgcctgggcgacctgtatgaggaggagatgcgggagctgcgccggcaggtggaccagctcaccaatgacaaggcccgtgtcgaggtggagcgtgacaacctggctgaggacatcatgcggctgcgagagaaattgcaggaggagatgctccagagagaggaagccgagagcaccctgcagtccttcagacaggatgttgacaatgcttctctggcacgtcttgatcttgaacgtaaagtggaatccttgcaagaggagattgcctttttgaagaaactgcatgatgaagagatccaggagctacaggcccagattcaggaacagcatgtccagattgatgtggatgtttccaagcctgacctcacggctgccctgcgtgatgtccgccagcagtatgaaagtgtggctgccaagaacctccaggaggcagaggaatggtacaagtccaagtttgctgacctctctgaggctgccaaccggaacaatgacgctctgcgccaggcaaagcaggagtccaatgagtaccggagacaggtgcagtccctcacctgcgaggtggatgcccttaaaggaacgaatgaatccctggaacgccagatgcgtgagatggaagagaatttctcccttgaagctgctaactaccaggacactattggccgcctgcaggatgagattcagaacatgaaggaagagatggctcgtcaccttcgtgaataccaagacctgctcaatgttaagatggcgctcgacattgagattgccacctacaggaagctgctggaaggcgaggagagcaggatttctctgcctcttccaaacttttcttccctgaacctgagagaaactaatctggagtctctccctctggtggacacccactcaaaaagaaccctcctgattaagacggttgaaaccagagatggacaggtgatcaatgaaacctctcagcatcacgatgaccttgagtaaaacctgcacgcactccgtgccgcagcgcagcaccagcaagaagacaggaattcgcatcttcaggaaacagcttccaagtgccttttgctgcagttttccaggagcgcaagatagattggagatagacatcagccccagtttctaacaactgacaccctaaagatttagaggtttacaacacaatctagtttacgaagaaatcttgtgctagaatactttttaaagtatttttgaatatccttaaaactgctttttttcccagtaaatacctgaccaacttgttactgcttcaataaatcttcagaaatac

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