LOCUS       XM_040884300             396 bp    mRNA    linear   PLN 18-APR-2022
DEFINITION  Linderina pennispora ubiquitin-protein ligase RKR1
            (DL89DRAFT_215944), partial mRNA.
ACCESSION   XM_040884300
VERSION     XM_040884300.1
DBLINK      BioProject: PRJNA721997
            BioSample: SAMN02744846
KEYWORDS    RefSeq.
SOURCE      Linderina pennispora
  ORGANISM  Linderina pennispora
            Eukaryota; Fungi; Fungi incertae sedis; Zoopagomycota;
            Kickxellomycotina; Kickxellomycetes; Kickxellales; Kickxellaceae;
            Linderina.
REFERENCE   1  (bases 1 to 396)
  AUTHORS   Mondo,S.J., Dannebaum,R.O., Kuo,R.C., Labutti,K., Haridas,S.,
            Kuo,A., Salamov,A., Ahrendt,S.R., Lipzen,A., Sullivan,W.,
            Andreopoulos,W.B., Clum,A., Lindquist,E., Daum,C.,
            Ramamoorthy,G.K., Gryganskyi,A., Culley,D., Magnuson,J.K.,
            James,T.Y., O'Malley,M.A., Stajich,J.E., Spatafora,J.W., Visel,A.
            and Grigoriev,I.V.
  CONSRTM   DOE Joint Genome Institute
  TITLE     Pervasive Adenine N6-methylation of Active Genes in Fungi
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 396)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 396)
  AUTHORS   Mondo,S.J., Dannebaum,R.O., Kuo,R.C., Labutti,K., Haridas,S.,
            Kuo,A., Salamov,A., Ahrendt,S.R., Lipzen,A., Sullivan,W.,
            Andreopoulos,W.B., Clum,A., Lindquist,E., Daum,C.,
            Ramamoorthy,G.K., Gryganskyi,A., Culley,D., Magnuson,J.K.,
            James,T.Y., O'Malley,M.A., Stajich,J.E., Spatafora,J.W., Visel,A.,
            Grigoriev,I.V., Nordberg,H.P., Cantor,M.N. and Hua,S.X.
  CONSRTM   DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (28-JUL-2016) DOE Joint Genome Institute, 2800 Mitchell
            Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NW_024468251).
            
            ##Metadata-START##
            Organism Display Name :: Linderina pennispora ATCC 12442
            GOLD Stamp ID         :: Gp0036322
            ##Metadata-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Linderina pennispora"
                     /mol_type="mRNA"
                     /strain="ATCC 12442"
                     /culture_collection="ATCC:12442"
                     /type_material="type material of Linderina pennispora"
                     /db_xref="taxon:61395"
                     /chromosome="Unknown"
     gene            <1..>396
                     /locus_tag="DL89DRAFT_215944"
                     /db_xref="GeneID:63800948"
     CDS             <1..396
                     /locus_tag="DL89DRAFT_215944"
                     /codon_start=1
                     /product="ubiquitin-protein ligase RKR1"
                     /protein_id="XP_040745878.1"
                     /db_xref="GeneID:63800948"
                     /db_xref="InterPro:IPR001841"
                     /db_xref="JGIDB:Linpe1_215944"
                     /translation="

QVSMTYTVDDSTLEITVRVPASYPLSLPTIESMKRVAVTEKRWRSWLVAAQAQMSRNRRLDAVCAQLLGNVGAHFAGVEDCAICYSAVGALDNSLPTKQCKTCKHKFHRMCLFKWFSTSNQSSCPLCRNLF"

     misc_feature    <1..393
                     /locus_tag="DL89DRAFT_215944"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]; Region:
                     COG5219"
                     /db_xref="CDD:227544"
ORIGIN      

caggtcagcatgacctataccgtcgatgacagcactctggagatcacggtacgggtgcctgcttcctatccgctgtccctgccgacgatcgagtcgatgaagcgcgtggcggtcaccgagaagcgctggcgcagctggctggtggccgcgcaagcgcaaatgtcgcgcaaccggcgcctcgacgccgtctgcgcacagctgctgggcaatgtgggcgcgcatttcgccggcgtcgaggactgtgcgatctgctactcggcagtcggcgcgctggacaacagcctgccgacaaagcagtgcaagacatgcaagcacaagttccaccgcatgtgtctgttcaagtggttcagcaccagcaaccagagctcgtgcccgctgtgccgcaacctgttctag

//