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2024-04-19 01:37:44, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_030022364            3421 bp    mRNA    linear   VRT 03-MAY-2021
DEFINITION  PREDICTED: Aquila chrysaetos chrysaetos claudin 20 (CLDN20), mRNA.
ACCESSION   XM_030022364
VERSION     XM_030022364.1
DBLINK      BioProject: PRJNA556399
KEYWORDS    RefSeq.
SOURCE      Aquila chrysaetos chrysaetos
  ORGANISM  Aquila chrysaetos chrysaetos
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Accipitriformes; Accipitridae;
            Accipitrinae; Aquila.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_044011.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Aquila chrysaetos chrysaetos
                                           Annotation Release 101
            Annotation Version          :: 101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3421
                     /organism="Aquila chrysaetos chrysaetos"
                     /mol_type="mRNA"
                     /sub_species="chrysaetos"
                     /db_xref="taxon:223781"
                     /chromosome="8"
     gene            1..3421
                     /gene="CLDN20"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 9 Proteins, and 99% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 7 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:115344658"
     CDS             258..917
                     /gene="CLDN20"
                     /codon_start=1
                     /product="claudin-20"
                     /protein_id="XP_029878224.1"
                     /db_xref="GeneID:115344658"
                     /translation="
MASASLQFFAFILALFGVFGDITATLLPNWKVNADVGSNIITAITQMQGLWMDCTWYSTGMFSCTLKYSVLSLPVYIQAARTTMVLSCILSAFGICITTVGMKCTKLGGDPDSKSHACFAGGVCFILAGIFGLVPTSWYTREIISNFLDQTIPESSKHEPGGAVYIGFISAAFLLIAGVIFCTSCFKKQQGAWIYGPKQHHFPSTEQESNAGYNLKDYV"
     misc_feature    270..800
                     /gene="CLDN20"
                     /note="PMP-22/EMP/MP20/Claudin family; Region:
                     PMP22_Claudin; cl21598"
                     /db_xref="CDD:451326"
ORIGIN      
agtaatgcacttgctgcagagaagagaaaaaaaacaacattccaagaaattttgttaatacatgccaatgcagttttatatgagatgggatagttccattcaagagaaactgcatttttccaggatttctacagtgaagaaaacatctcagacctcacatccagcaagggctacagccttggctacgaagctaccaaccagttacactcatttacaagagaaaaacaggcagacaaaaggtgacagcagatatcatcatggcatcagcaagtctgcagttctttgcttttattctggctttgtttggtgtttttggagatatcaccgccaccctgctacccaactggaaggtaaatgcagatgttggttcaaatatcataacagctataacccagatgcaagggctttggatggactgcacatggtacagcactgggatgtttagctgtaccctgaaatactccgttctctctctccccgtctacatccaggctgcacggaccaccatggtactgtcttgtatcctatcagcctttgggatctgcatcactacagttggaatgaaatgcacaaagttgggaggggaccctgacagcaagagtcatgcttgttttgctggaggagtctgcttcattcttgcaggaatctttggattagtaccaacatcctggtacacgagggaaattatttcaaattttctggaccagaccattccagagagcagtaaacatgaaccaggaggagcagtttatataggattcatttcagcagcgtttctgcttattgcaggtgtaatcttctgcacttcctgttttaaaaagcagcaaggagcatggatttacggtccaaagcagcaccattttccatccacggagcaggaaagcaacgcaggttacaacctgaaggactatgtataaaaatacagttacttctatctgttgaagctttttttgtgctaagtgtagtttgattatttcaaagaatgtataacatagcacttttcttgcatctgggttgcagttatgtttaagcaaggtatttcatttatagcagcatccacaaaaagaatgaagcaggaaacaatgcttaagtctgctactaaagtacttttttgtgttgatttttcaaaccattctttttgactttcccagtaacatttattgaagaaaaaggaactattttaaaacataactgacagaataattaatgtactgatggcttgttacagcaaagatgcttaaaaactaactgctttctatttagcaaatcaggctatcaataacatataatgttttatagtgtattttacatttttatctttattttagtcatgatgcaggggaaaaaacccaaccactctttgtccaagaagcccaattcaatggtttttaaatagcagacacatctgccttttattttctaaattgccttggtaactagatttcttaaaaaaaaacaacaaaaaaacaaaaaaacaaaaaaaacacccacaacaaaaaccacacacacaaacaccaaaacaaagcaaaaaaccacaacaaaaactcccagtcccaaaccttagctgcattgtatattctgcatatcaggctgaagaatcagcagtaccattcagatcttgccaaaaatggctctcccgccccaaactgccacctgctgtgggtttcatttattattgttaaagaaatgtctactccgcattcaccaattgctgctaatctatcattacacaatgaatgtgatatttgatgagcgatacaacagaaatgtaaccatgactatgaaaacacctgcaaactgtaacacacaggatacaaagtaaattatctgtgttccagaaaaacctggaagccttctggcttacacttcttcaaagtagcttttaacagctcaaatcacacagctaccatttattgtcttctacatttctggccttctaaaagaactttgtaagtccttgtaattattcctgtcgggtctgtttcaggcccgctcccatgtattctattaccgtaaaacgtaatatacaatggtgatgaagagacagcttcttcgtctaaatttattttcttaactcccttattttgattaataatcttagatcctttaaccttttctttcaccacacagattttgttttgtattggtcattggcagagtatgttctatctaaacacttccctaaatgagaatcaaattgatggtaatttgctagcatgggtaagggaatgagaaggagtatgatacaggcctttaaatttaggaatacaataatgctggatgagtctttcaacaaaaccaactgctatttattttgcatatttatatacaactttaatttcccatattattaacctgaaatttactaaaacagtatgaaggggccttaacattatacctacagtttgttggaaaaagtaagatcttctgttacagcatttgagaaaatggaatgttttatgcatctaatacgtaaagagtctttattcgaatatacatagaatggaattacatcttgcttgtattaccactgttatgtagccattttgagtttcctatgtattcattaagaagcttgttttgtacaattcctaatgctagtatcagcagttatttggtattggaaagactgaactatgaccaaaaagccaagttttctttgcttagacacaacgctgtgcagcaccattccattccataaaccagtagtcttttatatctcaacattcctcgtattgttgaaataatattcattcattgggaaaatgaagtaaacaactcattcccaaaaacatgcatctccacctttagtaagtggtttgacatgacactaagctgtgatcattgctatgtatgtgaattaaaactaacatttgtaaagtaagaaccaaaggcattttcacaggagggcataagaaaaaggtaataactgcatatcatgagcaaaatgaggtattcatcggttacataagcagcaaatttttcttcctataactttatacagaagtacctgaatttccttgtatgcctatgaaaccaaaatgaagcacgcacttagccacctcattcacaatatgctgcaagagctttccaagaaaacaaagattctgtcagaaacagtaatatctaaaaccatgtcagtctatggctaaaagaacaaggacaaaacagaagatcaatctacaacaggagtttgaaggaaacaaaatatagtgagaacaggtctgtctgaaaaatttgtactttctgcttttgctatataagcaatacttgttttaactcaaagaaatatattaaataaaaatatgcttgcctttagtgggactgccttttttattcaagagagcaccaacagactgtaggatttgcttatactaagacatttgtcacaactctgagctacccctctcagtcaactatg
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]