LOCUS       XM_026015970            1828 bp    mRNA    linear   MAM 30-JUL-2018
DEFINITION  PREDICTED: Vulpes vulpes vimentin (VIM), mRNA.
ACCESSION   XM_026015970
VERSION     XM_026015970.1
DBLINK      BioProject: PRJNA482864
KEYWORDS    RefSeq.
SOURCE      Vulpes vulpes (red fox)
  ORGANISM  Vulpes vulpes
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae;
            Vulpes.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_020356439.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Vulpes vulpes Annotation Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.1
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1828
                     /organism="Vulpes vulpes"
                     /mol_type="mRNA"
                     /strain="TameXAggressive cross"
                     /db_xref="taxon:9627"
                     /chromosome="Unknown"
                     /sex="male"
                     /tissue_type="blood"
                     /dev_stage="adult"
     gene            1..1828
                     /gene="VIM"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 21 Proteins, and 98% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:112932963"
     CDS             106..1506
                     /gene="VIM"
                     /codon_start=1
                     /product="vimentin"
                     /protein_id="XP_025871755.1"
                     /db_xref="GeneID:112932963"
                     /translation="

MSTRSVSSSSYRRMFGGPGTGSRPSSTRSYVTTSTRTYSLGSALRPSTSRSLYASSPGGAYATRSSAVRLRSSVPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELKDLFTNYIDKVRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLAEDIMXLPGGAREEMLQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHDEEIQELQAQIQDQHVQIDMDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSEAANRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRIALPLPNFSSLNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE"

     misc_feature    145..408
                     /gene="VIM"
                     /note="Intermediate filament head (DNA binding) region;
                     Region: Filament_head; pfam04732"
                     /db_xref="CDD:428095"
     misc_feature    409..1335
                     /gene="VIM"
                     /note="Intermediate filament protein; Region: Filament;
                     pfam00038"
                     /db_xref="CDD:425436"
ORIGIN      

gcagccgcgcgcccgccgcccgcagccaccgcgccctcgctcgccggtccccccgagccggtccgtgccgccgcagccgcgcagcccgccgccgccctccgcaccatgtccaccaggtctgtgtcctcgtcctcctaccgcaggatgttcggcggcccgggcaccgggagccggccgagctccacgcggagctacgtgaccacgtccacccgcacctacagcctgggcagcgcgctgcgccccagcaccagccgcagcctctacgcctcgtccccgggcggcgcgtacgccacgcgctcctccgcggtgcgcctgcggagcagtgtgcccggcgtgcgtctgctgcaggactcggtggacttctcgctggccgacgccatcaacaccgagttcaagaacacgcgcaccaacgagaaggtggagctgcaggagctgaaggacctcttcaccaactacatcgacaaggtgcgcttcctggagcagcagaacaagatcctgctggccgagctcgagcagctcaagggccagggcaagtcgcgcctgggggacctctacgaggaggagatgcgggagctgcgccggcaggtggaccagctcaccaacgacaaggcccgcgtcgaggtggagcgcgacaacctggccgaggacatcatgnctctgcctgggggagcgcgggaggagatgctccagagagaggaagccgagagcaccctgcagtctttccgacaggatgttgacaatgcttctttggcacgtcttgaccttgagcggaaagtggaatccttgcaagaagagattgcctttttgaagaaactacatgatgaggaaatccaggagctgcaggcccagattcaggaccagcatgtccaaatcgatatggatgtttccaagcctgacctcacggctgccctgcgtgatgtacgccagcaatatgaaagcgtggctgccaagaaccttcaggaggccgaggaatggtacaagtccaagtttgccgacctctctgaggctgctaaccggaacaatgatgccctgcgccaggcgaagcaggagtcaaatgagtaccggagacaggtgcagtccctcacctgcgaagtggatgcactcaaagggactaatgagtctctggaacgccagatgcgtgaaatggaagagaactttgccgtcgaagctgctaactaccaagacactattggccgcctgcaggatgagattcagaacatgaaggaagaaatggctcgtcaccttcgggagtaccaggacctgctgaatgttaagatggctcttgacattgagattgccacctacaggaagctgctggaaggcgaggagagcaggattgctctgcctcttccaaacttttcttccctgaacctgagggaaaccaacctggattcactccctctggttgacactcactcaaaaagaacgcttctgattaagacggttgaaactagggatggacaggttatcaacgaaacttctcagcatcatgatgaccttgagtgaagcttgcccagattcggtgcagcaattattaccagcaagaataaaaaaaaagaaatccgtatcttaaagaaacagctttcaagtgcctttctgcagtttttcaggagcgcaagatagatttggaattaggaataacctctagttcttaagaaccaacactcttaaaagatttaggagaaagtttacaacataatctagtttacaaagaaaacttgtgctagaatactttttaaaaagtatttttgaataccattaaaactgcttttttccaacaagtatctgaccaacttgtttctgcttcaataaatctttggaaaactct

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