LOCUS       XM_021718820            4053 bp    mRNA    linear   PRI 01-JUL-2017
DEFINITION  PREDICTED: Carlito syrichta testis and ovary specific PAZ domain
            containing 1 (TOPAZ1), mRNA.
ACCESSION   XM_021718820
VERSION     XM_021718820.1
DBLINK      BioProject: PRJNA236776
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Carlito syrichta (Philippine tarsier)
  ORGANISM  Carlito syrichta
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Tarsiiformes; Tarsiidae; Carlito.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_007257841.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Carlito syrichta Annotation Release
                                           101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 7.4
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 7% of CDS bases
            frameshifts          :: corrected 1 indel
            internal stop codons :: corrected 4 genomic stop codon
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-105               ABRT02444418.1     2843-2947
            106-294             ABRT02444418.1     3509-3697
            295-577             ABRT02444420.1     8-290
            578-681             ABRT02444420.1     744-847
            682-3017            ABRT02444420.1     849-3184
            3018-3079           ABRT02444420.1     8228-8289
            3080-3207           ABRT02444420.1     9563-9690
            3208-3272           ABRT02444421.1     4732-4796
            3273-3412           ABRT02444421.1     7031-7170
            3413-3498           ABRT02444421.1     9497-9582
            3499-3624           ABRT02444421.1     10407-10532
            3625-3688           ABRT02444421.1     14826-14889
            3689-3840           ABRT02444421.1     18045-18196
            3841-3933           ABRT02444421.1     18402-18494
            3934-4053           ABRT02444421.1     21610-21729
FEATURES             Location/Qualifiers
     source          1..4053
                     /organism="Carlito syrichta"
                     /mol_type="mRNA"
                     /isolate="Samal-C Ts95f"
                     /db_xref="taxon:1868482"
                     /chromosome="Unknown"
                     /sex="female"
                     /geo_loc_name="USA: Duke University Lemur Center, Durham,
                     NC"
     gene            1..4053
                     /gene="TOPAZ1"
                     /note="The sequence of the model RefSeq transcript was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 ESTs, 2 Proteins"
                     /db_xref="GeneID:103273137"
     CDS             1..4053
                     /gene="TOPAZ1"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon;
                     substituted 4 bases at 4 genomic stop codons"
                     /codon_start=1
                     /transl_except=(pos:676..678,aa:OTHER)
                     /transl_except=(pos:766..768,aa:OTHER)
                     /transl_except=(pos:814..816,aa:OTHER)
                     /transl_except=(pos:844..846,aa:OTHER)
                     /product="LOW QUALITY PROTEIN: testis- and ovary-specific
                     PAZ domain-containing protein 1"
                     /protein_id="XP_021574495.1"
                     /db_xref="GeneID:103273137"
                     /translation="

MFIPQVKSEVGKRTRELSGNWFGQPRSFKMTDPLTSWVVISVLVSPAACDLVGHAGVPMQGTQHASCRKLRESAAVPAAEASREPNPEQSKDGFSEQPKRGQRRASGLGEAGGCCPEAGGRDESRQRRRMVTRASGREEVESGKSGEAFRAGKAARQPAEGPRGQVGSLVSSEQPGMLAAREVELLLQSGRHTKEKRKVTEASSDDPQSGIDLVRNESLTSSESFXTVECSEFQNMAFLQSLGKEGLVEGIKRRIXIKKCKSLESPPLKITXNEAAQNSKIXFQDELYKNTPEYSCNSLSPGVENNSIFKLHDCYCFPHSKGCNDENNLAYKPDGGCMHVAENSSKLKKENRRSLAEKSDTNGIPQLLQTEENVMGVNKLLLEESNVCHSKNNDLLSCLQNEKNKYSIEESSVRRKLRKRIKLSEKGDETVIIEMNFSNVYNKSELVLQENQMGAKGKEAETLETKKSSLNVLKNHTTLSPLDHSLSFPKTAGKKLSHVHRGNAMLQKTFEPLLKEETKNASEPLECKSMEPEEYFKSTKSSIGKSPNDYHDVGKRSSPEDLRNEAEESKLNCQRTIPMTGKRTWPYYSCARVSAQCWKKASLPESNCFLSGSQEYLRQDDLLKHQTNQTHLIDSKLLLQSPLTVANMESSSKEKLDSNLNSLSSVSTIEPTLMAIKEPIIKDDKKIKSEEPSRSRSEVISNTTEDTPVTNVTQSLTGSKKKHRGNLTKLYLTVASQDGQEANNSTGKTIHQRACFAKQTHVVPDLVKILNTGRLTNFKIPLLKNKTEKSKVNAKSSERDVYSPLELLDSLSGTEVRQNRDKENVHLVTSGPQSLSIQNSATPVQASSISPRFTKQGNDNKPSNHISEPGNIVSIKEPVSVAIESNTFTCDPGCIEKSPFFCSNEKETFKPISTEISGRKMTKNFSEIKVELPLPDILKAYEDDVLLIDVIQDDPDLFGVSSEGEASFTSKVPMISQESNVAEEHQSTDYKNMEPPEKKEPSDDLRELPVLGPGLMKSEICASLPAASEIKHDSRDAHISFEEVTNETPENEKPRDFSEQIKGSDPNEKCRFSDNVTIKEEKENIYEVYKSKDSRNVDIMVDECQLAALIPKPPYLLVPPLNLSVHQEDTILKPWMNDLRIPGKHSVLKLQNPETCEIFKREKNVGVFQKPLGLMIPHRYCKFHFNTLRGCERSPCKFAHVPEQGDEKVCMDVFKKYISINELCLLQRAVNIFLEYYRKFPPGLHFDLQVLNNLLNSLLKHCLLKEVFQVLNLSIMVKILPSLKILLNIFEHVATMKLRNAVPALIDIFYKLVKAGMVLDPEHLNYIVKLLCQVQASKQQVTAVLEMKSR"

ORIGIN      

atgttcataccacaagtaaagtcagaagtaggaaagagaaccagagaactctctggaaactggtttggtcagccgagatcatttaaaatgactgaccccctgacctcctgggtggtgatctcggtgctggtgtccccagctgcgtgtgacctggtggggcacgccggtgttccgatgcaagggacgcaacacgcgagttgcaggaagcttcgggagtcagccgcggtgccggcggcagaggctagcagagagcccaatccagaacaaagcaaagatggcttttcagagcagccaaagcgaggccagcggcgggcgtcaggactaggcgaggcgggaggctgctgccctgaggctggggggcgcgacgaaagcaggcagaggaggagaatggtgacccgggcgtctggaagagaagaggtggagagtggcaagtcgggtgaggcgttcagggcggggaaggccgcgaggcagccagcggaagggcctcggggccaggtgggctcgttggtctcgtcagagcagccaggcatgctagcggcgagggaggtggagctcctcttgcaatcgggaagacacaccaaggaaaaaagaaaagttactgaagcctcaagtgatgatccacagtcagggattgacctggtaagaaatgaatcattaaccagttcagaatctttctagacagtggagtgcagtgaatttcaaaatatggcttttttgcagtctttgggtaaggaaggtttggtagaaggtattaaaagaagaatttaaattaaaaaatgtaaaagcttagaaagtccacctctcaaaataacttaaaatgaggctgcacaaaatagtaagatttaattccaagatgaactgtacaagaatactccagaatattcttgtaacagcttgtcacctggagtagaaaataattccatttttaaattacatgattgctattgtttcccccattccaagggttgtaatgatgaaaacaacctggcatataagcctgatggtggatgtatgcatgtagcagaaaattcctcgaagttaaagaaagaaaaccgtaggagtcttgcagagaagagtgacacaaatggtattcctcagctcttacaaactgaagaaaatgtaatgggagtaaataagttactactagaagaaagtaatgtatgccatagtaaaaataatgacttgctctcctgccttcaaaatgaaaaaaataagtattcaatagaggagagcagtgttcggagaaaactcagaaaaaggataaagttgtctgaaaaaggagacgaaactgttattattgagatgaacttctctaatgtgtataacaaatctgagctggtgttgcaagaaaaccaaatgggtgccaagggtaaggaagcagagacgttagaaactaaaaaaagttctttaaatgttttgaaaaatcatactacactctctccactggatcattcattaagtttcccaaaaacagcaggaaaaaaactaagtcatgtacatcgtggaaatgctatgcttcagaaaacctttgagcctcttttgaaagaagaaacaaagaatgcttcagagcccttagaatgtaaaagcatggagccagaagagtattttaagtcaacgaaaagctccatagggaaatcaccaaatgattaccacgatgttggaaagagatcatcaccagaagacttaagaaatgaagctgaagaatcaaagttaaactgtcagagaacaataccaatgactggtaaaagaacttggccttattattcatgtgctagggtatctgcccagtgttggaaaaaggcttccttgccagaatcaaattgttttctttctggatctcaggaatatcttaggcaagatgatttacttaaacaccaaacaaaccagacacacctaattgactccaaattattattacaaagtcccttaacagtagcaaacatggaatcttcaagtaaagaaaaattggattctaatttaaatagtttgtcttctgtttctacaatagaacccactttaatggccataaaagaacctataatcaaggatgataaaaagataaagtcagaggaaccaagcagaagtaggtcagaggtaatttctaatactactgaagacactccggtaactaatgtgactcaaagcttaacaggaagtaaaaaaaaacatagaggaaatttaacaaaactttatttgacagtggcttcccaagatggtcaggaagcaaacaattctacaggcaaaactattcatcaaagagcatgctttgctaaacagacgcatgtggttccagacttggttaaaatattgaacacaggacggctgactaattttaagattcctttacttaagaataagacagaaaaaagcaaagttaatgccaagtcatcagagagagacgtgtacagtcccttagaacttctggacagtttgtctggaacagaggtaagacagaatagggataaagaaaatgttcatctggtaacttcaggacctcagtctttaagcatacaaaatagtgcaactccagtgcaagctagtagtatttctccaagatttacaaagcagggtaatgataataagccatctaatcatatctctgaaccaggcaatattgtttctattaaggaacctgtttctgtcgcaattgaaagtaatacttttacttgtgatcctgggtgtatagagaaaagtcctttcttctgctctaatgaaaaagaaacattcaaaccaatttccactgaaattagtggtagaaaaatgactaagaatttttcagaaatcaaagtggagcttccgcttccagatattcttaaagcttatgaagatgatgtcctcttaattgatgtaattcaagatgacccagacctatttggagtctccagtgaaggggaggcctcatttacttcaaaggtccccatgataagccaggagtccaatgttgctgaagagcaccagtcaacagactacaagaacatggaacctccagaaaaaaaagaaccaagcgatgacttgagagaacttcctgtactgggccctggattgatgaagtcagagatctgtgcttccttgccagcagcaagtgagataaaacatgattccagagatgcacacatttcctttgaagaagttactaatgagactcctgagaatgaaaaaccaagagacttcagtgagcaaataaaaggttcagacccgaatgaaaagtgtagattttcagacaatgtgactattaaagaagagaaagaaaatatttatgaagtttacaaaagcaaagattctagaaacgtagacattatggttgatgaatgtcagttagcagcactgatcccaaaacctccatacttattagtgcctcctctgaatctaagtgttcatcaagaagacacaatactgaagccctggatgaatgatctcagaattccaggaaaacattctgtcctaaagctgcagaatcctgaaacttgtgaaatatttaagagggaaaaaaatgtgggggtgttccaaaagcccttagggttgatgataccccatagatactgcaaatttcattttaatacattacgaggctgtgagcgatcaccatgcaagtttgctcatgttcctgagcaaggggatgaaaaggtttgcatggatgtgtttaagaaatatataagtatcaatgagctatgtttactacaacgtgcagtgaacatatttttggaatactacagaaagtttcccccaggtttgcactttgatttacaagtgctaaataaccttctaaattctttactcaaacattgtttattgaaagaagtatttcaggtattgaacctcagcataatggttaaaatactgccttctctgaaaatactgttaaacatattcgagcatgtagcaactatgaaattaaggaatgctgtgcctgctttaattgatatcttttacaagcttgttaaagctgggatggtgcttgacccagaacaccttaattatattgttaagctcttatgccaagtacaggcatccaaacaacaagtaactgcagttctggaaatgaaatccaggtga

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