LOCUS       XM_020591662            1859 bp    mRNA    linear   VRT 27-MAR-2017
DEFINITION  PREDICTED: Monopterus albus vimentin (vim), mRNA.
ACCESSION   XM_020591662
VERSION     XM_020591662.1
DBLINK      BioProject: PRJNA380265
KEYWORDS    RefSeq.
SOURCE      Monopterus albus (swamp eel)
  ORGANISM  Monopterus albus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Anabantaria; Synbranchiformes; Synbranchidae;
            Monopterus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_018127894.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Monopterus albus Annotation Release
                                           100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 7.3
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1859
                     /organism="Monopterus albus"
                     /mol_type="mRNA"
                     /db_xref="taxon:43700"
                     /chromosome="Unknown"
                     /sex="male"
                     /country="China"
     gene            1..1859
                     /gene="vim"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 66 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 2 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:109955479"
     CDS             91..1455
                     /gene="vim"
                     /codon_start=1
                     /product="vimentin"
                     /protein_id="XP_020447318.1"
                     /db_xref="GeneID:109955479"
                     /translation="

MSYRSAPHSSYKKMFGGERTTVRTSSTRQFSSPVRSRVSFGLSSTPTIYAAKTHRFRSSVAMPRLASDNLDFSLSDAINSEFITNRTNEKAQMQSLNDRFANYIEKVRFLEQQNKILLAEVEQLRGKGTSRVGDLYEDEMRDLRRQVDQLTNEKARVEVHRDNLADDIGRLREKLQDEISQREEAEANMQSFRQDVDNAALARLDLERKVESLQEEINFLKKLHDEEMLELQNQVHQQQHVQVDMEIAKPDLTAALRDVRLQYENLASKNIQESEEWYKSKFADLTEAAAKNNDALRLAKQEANDYRRQVQSLTCEVDALKGTNESLERQMREMEENFSLETSGYQDTIGRLEEDIHNMKDEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISTPLPNFSSLNLRETMIDSKPHIETTTGKKVLIKTIETRDGQVINESTQNHSDMEQ"

     misc_feature    112..351
                     /gene="vim"
                     /note="Intermediate filament head (DNA binding) region;
                     Region: Filament_head; pfam04732"
                     /db_xref="CDD:428095"
     misc_feature    352..1281
                     /gene="vim"
                     /note="Intermediate filament protein; Region: Filament;
                     pfam00038"
                     /db_xref="CDD:425436"
ORIGIN      

cccagacgcactcagctgatgctgccggaacgagagcgcaaccaaatcggcaacgttactgtgctggttctctgaatagatacaaaaaagatgtcttataggtcagctccacattcctcttataaaaagatgtttggtggggagaggaccacggtcaggaccagctccacccgccaattctccagcccggtgcggtcccgggtatctttcggtctctcctccaccccgaccatctacgcagcgaagacccacaggtttcgtagcagcgtagccatgccccggctggcctccgacaacttggacttctcactgtccgacgccataaacagcgagttcatcacgaaccgcaccaacgagaaagcgcagatgcagtcgctcaacgaccgtttcgccaactacattgagaaggtccgtttcttggagcagcagaacaagatcctgctggcggaggtggagcagctgcggggaaaaggcacatctcgggttggagatctgtacgaggacgagatgcgggacctgaggcgccaggtggaccagctcacgaacgagaaggcccgggtggaagttcaccgggataacctggccgacgacatcggcaggctgagagagaagctgcaggatgagatatcccagcgggaggaggctgaagcaaacatgcagagcttcaggcaggacgtggacaatgctgccctcgccagactggaccttgagcgaaaggtagagtcactccaggaggagatcaacttcctcaagaagctgcatgatgaggagatgctggagctacaaaaccaggtccaccagcagcagcatgtgcaggttgacatggagatagctaaacctgaccttacagcagctctgagggacgttcgtcttcagtatgaaaacctggcctccaaaaacatccaggagtcggaggaatggtacaaatccaagtttgctgacctcactgaagctgcggccaagaataatgatgctttgagactggccaagcaggaggccaatgactatagacgccaagttcaatcacttacatgtgaggtggatgctctcaaaggaactaatgagtccttggagcgccagatgagagagatggaggagaacttctccctggagacaagcggttaccaggacaccattggccgtctggaggaggacattcacaacatgaaggacgagatggcccgtcacctccgggagtaccaggacctcctaaatgtcaagatggccctggacattgagattgccacctataggaagctgctggaaggagaggagagcagaatctccaccccactgcccaacttctcctctctaaacctgagagaaacaatgattgattccaaacctcatattgaaaccacaacaggcaaaaaggttctcatcaagacgattgagaccagggacggtcaggtgatcaatgaatcaacccagaaccacagtgacatggagcaatagtgtctttgtccttgccaaacaaccaacacaagcaatatgaacaaacacttcactggggcaacaatcaagcaaataaacaagaacacacagaaagcaaacagctttgaaaagtgcctttatatgatcattcagtcaacctgttagttgatacagactgtatttggcttccttctctgttgaaagtattactttgttacagttaatttgactcaataatgaatcagcacaacatagagatcctactgagagctacaggatcctcctttgtaaccaagctagcatttttaatcaatacagcatgcacactccaggaaatatgtatgctaaagatgtcacacttgtctgtatgcagcaataaaccctaaagactgaaactcagtgctgtgcgtgaggtgtaatacttt

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