2024-04-27 04:20:31, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_018858572 300 bp mRNA linear PLN 28-AUG-2017 DEFINITION Metschnikowia bicuspidata var. bicuspidata NRRL YB-4993 ribosomal protein L36e (METBIDRAFT_76691), partial mRNA. ACCESSION XM_018858572 VERSION XM_018858572.1 DBLINK BioProject: PRJNA342692 BioSample: SAMN00773783 KEYWORDS RefSeq. SOURCE Metschnikowia bicuspidata var. bicuspidata NRRL YB-4993 ORGANISM Metschnikowia bicuspidata var. bicuspidata NRRL YB-4993 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Metschnikowiaceae; Metschnikowia. REFERENCE 1 (bases 1 to 300) AUTHORS Riley,R., Haridas,S., Wolfe,K.H., Lopes,M.R., Hittinger,C.T., Goker,M., Salamov,A.A., Wisecaver,J.H., Long,T.M., Calvey,C.H., Aerts,A.L., Barry,K.W., Choi,C., Clum,A., Coughlan,A.Y., Deshpande,S., Douglass,A.P., Hanson,S.J., Klenk,H.P., LaButti,K.M., Lapidus,A., Lindquist,E.A., Lipzen,A.M., Meier-Kolthoff,J.P., Ohm,R.A., Otillar,R.P., Pangilinan,J.L., Peng,Y., Rokas,A., Rosa,C.A., Scheuner,C., Sibirny,A.A., Slot,J.C., Stielow,J.B., Sun,H., Kurtzman,C.P., Blackwell,M., Grigoriev,I.V. and Jeffries,T.W. TITLE Comparative genomics of biotechnologically important yeasts JOURNAL Proc. Natl. Acad. Sci. U.S.A. 113 (35), 9882-9887 (2016) PUBMED 27535936 REFERENCE 2 (bases 1 to 300) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (28-AUG-2017) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 300) AUTHORS Riley,R., Haridas,S., Wolfe,K.H., Lopes,M.R., Hittinger,C.T., Goker,M., Salamov,A., Wisecaver,J., Long,T.M., Aerts,A.L., Barry,K., Choi,C., Clum,A., Coughlan,A.Y., Deshpande,S., Douglass,A.P., Hanson,S.J., Klenk,H.-P., LaButti,K., Lapidus,A., Lindquist,E., Lipzen,A., Meier-kolthoff,J.P., Ohm,R.A., Otillar,R.P., Pangilinan,J., Peng,Y., Rokas,A., Rosa,C.A., Scheuner,C., Sibirny,A.A., Slot,J.C., Stielow,J.B., Sun,H., Kurtzman,C.P., Blackwell,M., Jeffries,T.W., Grigoriev,I.V., Nordberg,H.P., Cantor,M.N. and Hua,S.X. CONSRTM DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (09-MAY-2016) DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_017387731). ##Metadata-START## Organism Display Name :: Metschnikowia bicuspidata NRRL YB-4993 GOLD Stamp ID :: Gp0018361 ##Metadata-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..300 /organism="Metschnikowia bicuspidata var. bicuspidata NRRL YB-4993" /mol_type="mRNA" /strain="NRRL YB-4993" /variety="bicuspidata" /type_material="culture from type material of Monospora bicuspidata" /db_xref="taxon:869754" /chromosome="Unknown" gene <1..>300 /locus_tag="METBIDRAFT_76691" /db_xref="GeneID:30031548" CDS 1..300 /locus_tag="METBIDRAFT_76691" /codon_start=1 /product="ribosomal protein L36e" /protein_id="XP_018714206.1" /db_xref="GeneID:30031548" /db_xref="InterPro:IPR000509" /db_xref="JGIDB:Metbi1_76691" /translation="
MAQTGIAVGLNKGHKTTQKEVVPRLSRKKGVLSKRAAFVRSIVSEVSGLAPYERRLIELIRNASEKRAKKLAKKRLGTHKRALRKVEEMNKIIAESKRH"
misc_feature 10..294 /locus_tag="METBIDRAFT_76691" /note="Ribosomal protein L36e; Region: Ribosomal_L36e; pfam01158" /db_xref="CDD:426088" ORIGIN
atggcccaaaccggtattgctgtcggtttgaacaagggtcacaaaaccacccaaaaggaagttgttccaagactttcccgcaagaagggagtcttgtccaagagagctgctttcgtcagaagcattgtctctgaggtctccggcttggccccatacgagagaagattgatcgagttgatcagaaacgccagcgagaagagagccaagaagttggccaagaagagattgggtacccacaagagagccttgagaaaggttgaggagatgaacaagatcattgctgagtctaagagacactaa
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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