LOCUS       XM_015786573             518 bp    mRNA    linear   PLN 10-JUL-2024
DEFINITION  PREDICTED: Oryza sativa Japonica Group disease resistance protein
            PIK6-NP-like (LOC107281202), mRNA.
ACCESSION   XM_015786573
VERSION     XM_015786573.3
DBLINK      BioProject: PRJNA1123306
KEYWORDS    RefSeq; corrected model.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_089040) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jul 10, 2024 this sequence version replaced XM_015786573.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_034140825.1-RS_2024_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/21/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-216               CP132240.1         10598046-10598261
            217-343             CP132240.1         10601701-10601827
            344-518             CP132240.1         10601829-10602003
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Oryza sativa Japonica Group"
                     /mol_type="mRNA"
                     /db_xref="taxon:39947"
                     /chromosome="6"
     gene            1..518
                     /gene="LOC107281202"
                     /note="disease resistance protein PIK6-NP-like; The
                     sequence of the model RefSeq transcript was modified
                     relative to its source genomic sequence to represent the
                     inferred CDS: deleted 1 base in 1 codon; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein, and 99% coverage of the annotated genomic
                     feature by RNAseq alignments, including 11 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:107281202"
     CDS             101..400
                     /gene="LOC107281202"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /codon_start=1
                     /product="LOW QUALITY PROTEIN: disease resistance protein
                     PIK6-NP-like"
                     /protein_id="XP_015642059.2"
                     /db_xref="GeneID:107281202"
                     /translation="

MAETVLSMARSLVGSAISKATSAAAHEASLLLGVQKDIWYIKDELKTMQAFLRAAEVMKKKDELLKVWAEQIRDLSYDIEDALTNSRSILRAKICFIRW"

     misc_feature    134..>349
                     /gene="LOC107281202"
                     /note="Rx N-terminal domain; Region: Rx_N; pfam18052"
                     /db_xref="CDD:436239"
ORIGIN      

cagagagctcactgcaaaagctaccatttctgattcgatctggtcgccaagttctctcccctgtgcagtctttggcgaaggtgaagaatccattcaatcgatggcggagacggtgctgagcatggcgaggtcgctggtgggcagtgccatcagcaaggccacctctgcggcggcccatgaggcgagcctcctactcggcgtccagaaggacatctggtatatcaaagatgagctgaaaacaatgcaagcgttcctacgagctgctgaagttatgaagaagaaagatgagctcttaaaggtttgggcagaacagatacgtgacttgtcctatgacattgaagatgccttgacgaattcaaggtccatattgagagccaaaatctgttttatcagatggtgaagctcagaaagcgccatctgatagctacccaaatccgtaacctcaaatcaagagttgaagaagtgagtagcagaaactcacgctacaatttagtcaaacctatttcatccagcaatga

//