LOCUS       XM_008334483            1858 bp    mRNA    linear   VRT 16-MAY-2018
DEFINITION  PREDICTED: Cynoglossus semilaevis vimentin (vim), mRNA.
ACCESSION   XM_008334483
VERSION     XM_008334483.3
DBLINK      BioProject: PRJNA251742
KEYWORDS    RefSeq.
SOURCE      Cynoglossus semilaevis (tongue sole)
  ORGANISM  Cynoglossus semilaevis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei;
            Cynoglossidae; Cynoglossinae; Cynoglossus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_024326.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On May 16, 2018 this sequence version replaced XM_008334483.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Cynoglossus semilaevis Annotation
                                           Release 102
            Annotation Version          :: 102
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1858
                     /organism="Cynoglossus semilaevis"
                     /mol_type="mRNA"
                     /isolate="Cse_v1.0"
                     /db_xref="taxon:244447"
                     /chromosome="20"
                     /tissue_type="blood"
                     /country="China"
                     /collection_date="Sep-2009"
     gene            1..1858
                     /gene="vim"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 86 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 31 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:103396409"
     CDS             128..1498
                     /gene="vim"
                     /codon_start=1
                     /product="vimentin"
                     /protein_id="XP_008332705.1"
                     /db_xref="GeneID:103396409"
                     /translation="

MSFSSPRHSSYRKMFSGDKVALRSYSSRQYSSPALRSSSRGTLSVSSAPTVYAAKTQRLRSSSAMPRLASENLDFSLSDAINTEFITNRTNEKAQMQSLNDRFANYIDKVRFLEQQNKILLAELEQLRGKGTTRVGDLYEDEMRELRRQVDQLTSEKARVEVHRDNLVDDVDRMREKLQDEIAQREEAESNMHSFRQDVDNAALARLDLERKVDSLQEEINFLKKLHDEEMLELQNQIQQQQHVQVDMDLAKPDLTAALRDVRLQYENLATKNIHESEEWYKSKFADLNDAAARNTDALRLAKQEANDYRRQIQALTCEVDALKGSNESLERQMRELEENFSQESNGYQDTIGRLEEDIHNMKDEMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISAPLPNLSALSLRESMHEAKPHAEATTTRKVLIKTIETRDGQVINESTQNHDDLE"

     misc_feature    146..397
                     /gene="vim"
                     /note="Intermediate filament head (DNA binding) region;
                     Region: Filament_head; pfam04732"
                     /db_xref="CDD:428095"
     misc_feature    398..1327
                     /gene="vim"
                     /note="Intermediate filament protein; Region: Filament;
                     pfam00038"
                     /db_xref="CDD:425436"
ORIGIN      

cgctccactctcatggagtcatttacataaggaggagactataaatgagtcagggtggagcagcactcttccaatgcgcactctgctgatgctctgaaggcgcactgtccgaaaagcaacttgaaagatgtcgttctcctcaccgcgacattcctcctacagaaagatgttcagtggagacaaggtggcgctcaggagctactccagccggcagtactccagccctgcactgcgctcctcctccagggggaccctgagcgtttcctctgccccgaccgtttacgcagcaaagacccagaggctgcggagcagctcagccatgccccggctggcctccgaaaacctggacttctctctgtccgacgccatcaacaccgagttcatcacgaaccgcaccaacgagaaggcgcagatgcagtcgctcaacgaccgcttcgccaactacatcgacaaggtgcgcttcctggagcagcagaacaagatcctgctggcggagctggagcagctgaggggcaaaggcacgacccgggtgggcgatctgtacgaggacgagatgcgggagctgaggcgtcaggtggaccagctgaccagcgagaaggcccgtgtggaggttcaccgggacaacttggtggacgacgtggacaggatgagagagaagttgcaggatgaaattgctcagcgagaagaggctgagtcaaacatgcacagcttcagacaggatgttgacaatgctgccctggccagactggaccttgagcggaaggtggactcactgcaagaggaaatcaacttccttaaaaagctgcacgatgaggaaatgctggagctgcagaatcagatccagcagcagcagcatgtccaggtggacatggacttggctaagcctgacctgacagctgctctgagggacgtccgtctgcagtacgagaacctcgccaccaaaaacatccatgagtctgaggaatggtacaaatcaaagtttgctgacctcaatgacgcagcagccagaaataccgacgctttgagactggccaagcaggaggccaatgactacagacgtcaaattcaggctctcacttgtgaagtggatgcccttaaaggaagcaatgaatccctggagcgtcaaatgagagaactggaggaaaacttctcccaggagagtaacggttaccaggacaccattggccgtttagaagaggacatccacaacatgaaggacgagatggcccgtcacctgcgggagtatcaggagctcctcaatgtcaaaatggctctggacattgagattgccacctacaggaagctgctggaaggagaggagagcagaatctctgctccactgccgaacctttcagccctcagcctgcgagaatcaatgcacgaagccaaacctcacgctgaagccacaacaacaagaaaggttctcatcaagaccatcgagaccagggatggtcaggtgatcaacgagtcaactcagaatcacgatgacctggagtagtaactttcaacaggaacaaaacaaagaaccacacgttactgtagccacaagcaagaaaaccaacctacaacaacaacacaacaaactcaacagctttgaaaaagtgcctttacatttgatgaccccatgagtctgttagttgatgaagacgatgatgaattactttttcctctgctgaagtgttttgtcacgtttgtttagacacattaatgaagtcagcacaatgtagaaaggtctacaagaatcctttgtaaccaaagtagccgtttggatccatatagcatgtacagagcagatatgtatgctgatgatgtcatgattgcctgtatgcagcaataaaccatcaaaactggaaaacaa

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