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2024-04-27 12:41:09, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       NM_001267070            1722 bp    mRNA    linear   PLN 21-FEB-2022
DEFINITION  Glycine max homeobox protein knotted-1-like 2-like (LOC100807602),
            mRNA.
ACCESSION   NM_001267070 XM_003544461 XM_003544462 XM_003544463 XM_003544464
VERSION     NM_001267070.1
KEYWORDS    RefSeq.
SOURCE      Glycine max (soybean)
  ORGANISM  Glycine max
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50
            kb inversion clade; NPAAA clade; indigoferoid/millettioid clade;
            Phaseoleae; Glycine; Glycine subgen. Soja.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from HM107002.1.
            
            On or before May 27, 2012 this sequence version replaced
            XM_003544461.1, XM_003544462.1, XM_003544463.1, XM_003544464.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: HM107002.1, SRR12327364.1321081.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16295013, SAMN16295014
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1722
                     /organism="Glycine max"
                     /mol_type="mRNA"
                     /cultivar="Dongnong 44"
                     /db_xref="taxon:3847"
                     /chromosome="14"
                     /map="14"
     gene            1..1722
                     /gene="LOC100807602"
                     /note="homeobox protein knotted-1-like 2-like"
                     /db_xref="GeneID:100807602"
     misc_feature    209..211
                     /gene="LOC100807602"
                     /note="upstream in-frame stop codon"
     CDS             245..1402
                     /gene="LOC100807602"
                     /note="KNOX-like DNA-binding protein"
                     /codon_start=1
                     /product="homeobox protein knotted-1-like 2-like"
                     /protein_id="NP_001253999.1"
                     /db_xref="GeneID:100807602"
                     /translation="
MEEYTSNNHLSENTGPSPSTPRPNFLYSSASGGNHNHQHQHHSHHHHHHHQFPINTFHLQSGGSDHCFQSDQVSPHPSVKSEASTSQLHAPIFHYPLMRGNLHNTMHHPQQQGGSPTSSTGEVEAIKAKIIAHPQYSNVLEAYMDCQKIGAPPEVVARMAAAKQEFEARQRSSVGSRETSKDPELDQFMEAYYDMLVKYREELTRPIQEAMDFMRRIETQLNMLCNGPVRIFSDDKCEGAGSSEEDQDNSGGETELPEIDPRAEDRELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQKLLNWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHPQSATLYMDGHYMADGHYRLGP"
     misc_feature    617..736
                     /gene="LOC100807602"
                     /note="KNOX1 domain; Region: KNOX1; pfam03790"
                     /db_xref="CDD:427505"
     misc_feature    776..919
                     /gene="LOC100807602"
                     /note="KNOX2 domain; Region: KNOX2; pfam03791"
                     /db_xref="CDD:427506"
     misc_feature    1043..1108
                     /gene="LOC100807602"
                     /note="ELK domain; Region: ELK; pfam03789"
                     /db_xref="CDD:427504"
     misc_feature    1166..1282
                     /gene="LOC100807602"
                     /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920"
                     /db_xref="CDD:428673"
ORIGIN      
ttggaccccaacacaaaacatcacacaagtgctgatggtggtgtggcccttcttattatttcatcttacaacaaccactcattaccaatccctcaactattttagggttcagaaacccttagggttttcttgttcctcatagtggattgagtagtacctcttggtttgtttgttggagcctcttgttcagctgggttaattagctgagtgagagagttttttgcttcccaatttcaaaaaattaatggaggaatacactagtaataatcacttgagtgaaaacacaggtccaagtccaagtactccaaggccaaatttcttgtactcttcagctagtggtggaaaccataatcatcagcatcagcatcatagccatcaccaccaccaccaccaccagtttccaatcaacacctttcatcttcaatcgggtggatcagatcattgctttcagtctgatcaagtttcaccacacccttctgtcaaatccgaagccagcacttctcagctccacgctccgattttccactaccctttaatgagaggaaaccttcacaacactatgcatcatcctcagcaacaaggagggagcccaactagctccactggtgaagttgaagccataaaagctaaaatcattgctcaccctcagtactccaatgttttagaagcctacatggattgtcaaaagataggagctccacccgaagtggtggcgcgtatggctgcggctaagcaagagtttgaggcacggcaaagatcttcagttggttcaagggaaacttcaaaagaccctgaacttgaccaattcatggaagcatactatgacatgcttgtgaagtatagagaggaattaacaaggcctattcaagaggctatggatttcatgcgaaggatagaaactcagctaaatatgctttgcaatggacccgtgcggatcttctctgatgataaatgtgaaggtgccggttcatcagaagaggatcaagacaacagtggaggagaaacagaacttcccgagattgatccccgagcagaagaccgtgaactcaaaaaccacttgctgaagaagtacagtggttacttaagtagccttaagcaagaactctccaagaagaaaaagaaagggaaacttcccaaagatgctaggcaaaagctacttaactggtgggaattacattacaaatggccatatccttcggaatcagagaaggtggcattggctgaatcaactggtttggaccaaaagcaaataaataactggttcataaaccagaggaagaggcattggaaaccatctgaagacatgcaatttatggtgatggatggcctgcatccgcagagtgcaactctctatatggatggtcactacatggcagatggtcactaccgtctaggaccatgacaaaagacaaggccaccttataaattattattatatatatttttaattgtaatttaaatgcaaggtatgtgtttcttattaacaaagagattgtgcccaaactggataacagtcaacgctctagctactagtttcaatattatcaagcatataccgtgaacattaattggttgtgcttgtgcagtgtgagtacttgagtagtttgccacagtgatgttgtacgttttattaaacaatgacggttgcttattatattttcataattagtagtattggtagagataatatatattcataagatgtgtcacatttggatttta
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]