LOCUS       NM_001251164            1696 bp    mRNA    linear   PLN 30-APR-2021
DEFINITION  Glycine max homeobox associated leucine zipper-containing protein
            (LOC100499926), mRNA.
ACCESSION   NM_001251164 XM_006577715
VERSION     NM_001251164.2
KEYWORDS    RefSeq.
SOURCE      Glycine max (soybean)
  ORGANISM  Glycine max
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50
            kb inversion clade; NPAAA clade; indigoferoid/millettioid clade;
            Phaseoleae; Glycine; Glycine subgen. Soja.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            EV270393.1, EV267539.1, EV265856.1, GR851850.1 and ACUP04001606.1.
            
            On or before Aug 17, 2017 this sequence version replaced
            XM_006577715.2, NM_001251164.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FG999524.1, BT090130.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00002965, SAMN09064557
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-359               EV270393.1         5-363
            360-639             EV267539.1         67-346
            640-640             EV265856.1         133-133
            641-1081            EV267539.1         348-788
            1082-1391           GR851850.1         357-666
            1392-1696           ACUP04001606.1     775660-775964
FEATURES             Location/Qualifiers
     source          1..1696
                     /organism="Glycine max"
                     /mol_type="mRNA"
                     /cultivar="Williams 82"
                     /db_xref="taxon:3847"
                     /chromosome="4"
                     /map="4"
     gene            1..1696
                     /gene="LOC100499926"
                     /note="homeobox associated leucine zipper-containing
                     protein"
                     /db_xref="GeneID:100499926"
     exon            1..738
                     /gene="LOC100499926"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    274..276
                     /gene="LOC100499926"
                     /note="upstream in-frame stop codon"
     CDS             370..1107
                     /gene="LOC100499926"
                     /codon_start=1
                     /product="homeobox associated leucine zipper-containing
                     protein"
                     /protein_id="NP_001238093.2"
                     /db_xref="GeneID:100499926"
                     /translation="

MMEGDENIQASSKGKYVESFNCSEAPRKKSKKIENKRRFSDEQIRSLECIFESESKLEPRKKMQLARDLGLQPRQVAIWFQNRRARWKSKRIEQEYRKLKDEYDNLASRFESLKKEKDSLQLELQKLSDLLEACQDDGREDKAGKENSIEDGGSGSGYSSWKPEAKPRFSNEGLEERIGVYSDDQNENSIIRGGEKSEDKGHQLLRMDDHAEMPLASLEKWYSGVDPSGILDQSCSSSQWLDFWT"

     misc_feature    order(475..480,484..486,535..537,553..555,592..594,
                     598..603,610..615,619..627,631..636)
                     /gene="LOC100499926"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     misc_feature    481..633
                     /gene="LOC100499926"
                     /note="Homeobox domain; Region: Homeobox; pfam00046"
                     /db_xref="CDD:425441"
     misc_feature    order(481..483,601..603,610..615,622..624)
                     /gene="LOC100499926"
                     /note="specific DNA base contacts [nucleotide binding];
                     other site"
                     /db_xref="CDD:238039"
     misc_feature    637..762
                     /gene="LOC100499926"
                     /note="Homeobox associated leucine zipper; Region: HALZ;
                     pfam02183"
                     /db_xref="CDD:426641"
     exon            739..1696
                     /gene="LOC100499926"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

gaaggtgacaactgacaaggaggcagttccttctacaaacaaaatagtatatggggcggtagatagataggctacaagtaaacgaagcaagataatttcttcctacttaacaaaagatagtaagagccacacggtatcttatcccataggtcaccatgatccttccattagaagttgcaataacgtgatagaaatggctttgagatacactttcttttatggttagctatatattctgaacccgatcccccctcaccagacttttaaatcacataattcttttttttatttcttggtggaaaacagattgtgcatctaattccaaattcacccataaaaatacttccttttgctcaccagccatatattatgatggagggagatgagaatattcaagcatcatcaaagggaaaatatgttgaaagcttcaactgctcggaggcaccaaggaagaaaagcaagaagatagaaaacaagaggaggtttagtgatgaacagataagatcactagaatgcatatttgagtcagagtcaaagcttgagccaaggaagaagatgcaactggctagagatcttggcctgcagcctcgccaagtggctatatggttccaaaacagaagggcaaggtggaaatcaaaacgaatagagcaagagtaccgaaaactcaaagatgaatatgacaatttagcatcaaggtttgagtccctaaagaaagagaaggactctttgcaattagagttgcagaaactaagtgatttgttggaggcatgtcaagatgatggaagggaagacaaggctggcaaagaaaacagcatagaagatggtggctcaggcagtggatacagcagttggaagcctgaagcaaaaccaaggttttcaaatgagggtttggaggagagaataggtgtgtactcagatgatcaaaatgagaatagcatcataaggggtggtgagaaatctgaagacaaaggacaccaacttctcagaatggatgatcatgcagagatgccattggcatcacttgaaaaatggtatagtggtgtggaccctagtggcatcttggaccagtcatgtagcagttctcaatggctagatttctggacttgaaaaaaacaagcgagccacactttgtgctgcatctgcatgtgtgatgttttgtttcctccgagagaaggaacaaaagattggttgattggttggctcttgtgctgccagcaggtccaaaacattccagcctagccaagaaactcgaaggaagttttgtaggcttgatttgataggcgagagaattaagatagcctcactcaattcaattgtgtagagatttggaaaaaaacaaataatgtgcaatgtctctgtctgttcatgcttgcatgcctttccaacccgtctttgcgtgtgttctttcttcttcttttttttcttttcccacttcaaggggttagttaatctagaacctctttatatttcttaaaggggtctctcttttatcactttagcttattcccatattaacaagtttgatccttatagcacgaccgagacacacaaaaataaaacttatgaacggtgtgaatgagatattgctcgacttcatgaagcagtgaagatgttaatttcaagttcttagcttctcttatgggccaattctgtgaatggaaagaatgtagcatattttcctacttggatcaatttt

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