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Previous release (v1)
2024-05-01 16:57:27, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NR_030395 100 bp RNA linear PRI 03-JUL-2021
DEFINITION Homo sapiens microRNA 658 (MIR658), microRNA.
ACCESSION NR_030395
VERSION NR_030395.1
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 100)
AUTHORS Enomoto Y, Takagi R, Naito Y, Kiniwa T, Tanaka Y, Hamada-Tsutsumi
S, Kawano M, Matsushita S, Ochiya T and Miyajima A.
TITLE Identification of the novel 3' UTR sequences of human IL-21 mRNA as
potential targets of miRNAs
JOURNAL Sci Rep 7 (1), 7780 (2017)
PUBMED 28798470
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 100)
AUTHORS Cummins JM, He Y, Leary RJ, Pagliarini R, Diaz LA Jr, Sjoblom T,
Barad O, Bentwich Z, Szafranska AE, Labourier E, Raymond CK,
Roberts BS, Juhl H, Kinzler KW, Vogelstein B and Velculescu VE.
TITLE The colorectal microRNAome
JOURNAL Proc Natl Acad Sci U S A 103 (10), 3687-3692 (2006)
PUBMED 16505370
REFERENCE 3 (bases 1 to 100)
AUTHORS Griffiths-Jones S, Grocock RJ, van Dongen S, Bateman A and Enright
AJ.
TITLE miRBase: microRNA sequences, targets and gene nomenclature
JOURNAL Nucleic Acids Res 34 (Database issue), D140-D144 (2006)
PUBMED 16381832
COMMENT PROVISIONAL REFSEQ: This record is based on preliminary annotation
provided by NCBI staff in collaboration with miRBase. The reference
sequence was derived from Z97630.11.
Summary: microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs
that are involved in post-transcriptional regulation of gene
expression in multicellular organisms by affecting both the
stability and translation of mRNAs. miRNAs are transcribed by RNA
polymerase II as part of capped and polyadenylated primary
transcripts (pri-miRNAs) that can be either protein-coding or
non-coding. The primary transcript is cleaved by the Drosha
ribonuclease III enzyme to produce an approximately 70-nt stem-loop
precursor miRNA (pre-miRNA), which is further cleaved by the
cytoplasmic Dicer ribonuclease to generate the mature miRNA and
antisense miRNA star (miRNA*) products. The mature miRNA is
incorporated into a RNA-induced silencing complex (RISC), which
recognizes target mRNAs through imperfect base pairing with the
miRNA and most commonly results in translational inhibition or
destabilization of the target mRNA. The RefSeq represents the
predicted microRNA stem-loop. [provided by RefSeq, Sep 2009].
Sequence Note: This record represents a predicted microRNA
stem-loop as defined by miRBase. Some sequence at the 5' and 3'
ends may not be included in the intermediate precursor miRNA
produced by Drosha cleavage.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-100 Z97630.11 52141-52240 c
FEATURES Location/Qualifiers
source 1..100
/organism="Homo sapiens"
/mol_type="transcribed RNA"
/db_xref="taxon:9606"
/chromosome="22"
/map="22q13.1"
gene 1..100
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/note="microRNA 658"
/db_xref="GeneID:724028"
/db_xref="HGNC:HGNC:32914"
/db_xref="miRBase:MI0003682"
precursor_RNA 1..100
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/product="microRNA 658"
/db_xref="GeneID:724028"
/db_xref="HGNC:HGNC:32914"
/db_xref="miRBase:MI0003682"
exon 1..100
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/inference="alignment:Splign:2.1.0"
variation 1
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="g"
/replace="gg"
/db_xref="dbSNP:1304692890"
variation 1
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="g"
/replace="t"
/db_xref="dbSNP:529609159"
variation 2
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="c"
/replace="t"
/db_xref="dbSNP:1216212407"
variation 3
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="c"
/replace="t"
/db_xref="dbSNP:750647224"
variation 4
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="c"
/db_xref="dbSNP:767813449"
variation 5..6
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="g"
/replace="gg"
/db_xref="dbSNP:1239752938"
variation 5
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:377682194"
variation 9
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:369047913"
variation 10
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="c"
/db_xref="dbSNP:1601742426"
variation 11
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:141002682"
variation 13
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="t"
/db_xref="dbSNP:763568080"
variation 16
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:775959099"
variation 18
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="g"
/replace="t"
/db_xref="dbSNP:2145994536"
variation 19
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="c"
/replace="t"
/db_xref="dbSNP:770600150"
variation 20..22
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="ggg"
/replace="gggg"
/db_xref="dbSNP:1048592023"
variation 24..29
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="cctgcc"
/replace="cctgcctgcc"
/db_xref="dbSNP:930980863"
variation 24
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:1372800331"
variation 25
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1168994923"
variation 26
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1430764572"
variation 27
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:746595629"
variation 28
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:777551623"
variation 30
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:979448385"
variation 33
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:372640432"
variation 34
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:754822660"
variation 35
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:753844117"
variation 38
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="g"
/db_xref="dbSNP:1249348969"
variation 39
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:756196998"
variation 41
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="g"
/replace="t"
/db_xref="dbSNP:750561921"
variation 42
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:377071473"
variation 45
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="c"
/replace="t"
/db_xref="dbSNP:762135808"
variation 46
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:751848940"
variation 48
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="c"
/replace="t"
/db_xref="dbSNP:1285436445"
variation 49
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="g"
/db_xref="dbSNP:1924684598"
variation 51
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:763333204"
variation 52
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace=""
/replace="a"
/db_xref="dbSNP:749947995"
variation 52
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:985898568"
variation 54
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="g"
/replace="gg"
/db_xref="dbSNP:766997175"
variation 54
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:372525426"
variation 55
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="g"
/db_xref="dbSNP:550359471"
variation 58
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:760255960"
variation 59..60
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace=""
/replace="ag"
/db_xref="dbSNP:761402531"
variation 59
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:771824669"
variation 60
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="g"
/db_xref="dbSNP:747854791"
ncRNA 61..85
/ncRNA_class="miRNA"
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/product="hsa-miR-658"
/db_xref="miRBase:MIMAT0003336"
/db_xref="GeneID:724028"
/db_xref="HGNC:HGNC:32914"
/db_xref="miRBase:MI0003682"
variation 62
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:773977094"
variation 63
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="c"
/replace="t"
/db_xref="dbSNP:1199720069"
variation 64
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:532233362"
variation 67..69
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="ggg"
/replace="gggg"
/db_xref="dbSNP:1924679777"
variation 69
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:749120612"
variation 72..77
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="gt"
/replace="gtaggt"
/db_xref="dbSNP:773930899"
variation 76
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="g"
/replace="t"
/db_xref="dbSNP:779951317"
variation 78
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="c"
/replace="t"
/db_xref="dbSNP:756113029"
variation 79
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:564567309"
variation 80
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:546365281"
variation 81
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="c"
/replace="t"
/db_xref="dbSNP:1601742121"
variation 82
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="c"
/replace="t"
/db_xref="dbSNP:1924677650"
variation 83
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="g"
/replace="t"
/db_xref="dbSNP:1924677348"
variation 84
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="g"
/db_xref="dbSNP:1201617536"
variation 85
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="c"
/replace="t"
/db_xref="dbSNP:2145994207"
variation 86
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:757376212"
variation 90
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:182859563"
variation 91
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="g"
/db_xref="dbSNP:758807011"
variation 92
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="c"
/replace="g"
/db_xref="dbSNP:1335447084"
variation 93
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:1305113416"
variation 96
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:200164410"
variation 97
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:1454304694"
variation 98
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="g"
/db_xref="dbSNP:1346864630"
variation 99
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="g"
/db_xref="dbSNP:369972422"
variation 100
/gene="MIR658"
/gene_synonym="hsa-mir-658; MIRN658"
/replace="a"
/replace="g"
/db_xref="dbSNP:542258250"
ORIGIN
gctcggttgccgtggttgcgggccctgcccgcccgccagctcgctgacagcacgactcagggcggagggaagtaggtccgttggtcggtcgggaacgagg
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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