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Previous release (v1)
2025-08-21 12:01:24, GGRNA.v2 : RefSeq release 230 (May, 2025)
LOCUS NM_001438364 9382 bp mRNA linear PRI 18-APR-2025
DEFINITION Homo sapiens transforming acidic coiled-coil containing protein 2
(TACC2), transcript variant 9, mRNA.
ACCESSION NM_001438364 XM_047424453 XM_054364522
VERSION NM_001438364.1
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 9382)
AUTHORS Ito,S., Takuwa,H., Kakehi,S., Someya,Y., Kaga,H., Kumahashi,N.,
Kuwata,S., Wakatsuki,T., Kadowaki,M., Yamamoto,S., Abe,T.,
Takeda,M., Ishikawa,Y., Liu,X., Otomo,N., Suetsugu,H., Koike,Y.,
Hikino,K., Tomizuka,K., Momozawa,Y., Ozaki,K., Isomura,M.,
Nabika,T., Kaneko,H., Ishijima,M., Kawamori,R., Watada,H.,
Tamura,Y., Uchio,Y., Ikegawa,S. and Terao,C.
TITLE A genome-wide association study identifies a locus associated with
knee extension strength in older Japanese individuals
JOURNAL Commun Biol 7 (1), 513 (2024)
PUBMED 38769351
REMARK GeneRIF: A genome-wide association study identifies a locus
associated with knee extension strength in older Japanese
individuals.
Publication Status: Online-Only
REFERENCE 2 (bases 1 to 9382)
AUTHORS Ito,Y., Terao,Y., Noma,S., Tagami,M., Yoshida,E., Hayashizaki,Y.,
Itoh,M. and Kawaji,H.
TITLE Nanopore sequencing reveals TACC2 locus complexity and diversity of
isoforms transcribed from an intronic promoter
JOURNAL Sci Rep 11 (1), 9355 (2021)
PUBMED 33931666
REMARK GeneRIF: Nanopore sequencing reveals TACC2 locus complexity and
diversity of isoforms transcribed from an intronic promoter.
Erratum:[Sci Rep. 2021 Aug 13;11(1):16835. doi:
10.1038/s41598-021-96196-9. PMID: 34389798]
Publication Status: Online-Only
REFERENCE 3 (bases 1 to 9382)
AUTHORS Mallampalli,R.K., Li,X., Jang,J.H., Kaminski,T., Hoji,A., Coon,T.,
Chandra,D., Welty,S., Teng,Y., Sembrat,J., Rojas,M., Zhao,Y.,
Lafyatis,R., Zou,C., Sciurba,F., Sundd,P., Lan,L. and Nyunoya,T.
TITLE Cigarette smoke exposure enhances transforming acidic
coiled-coil-containing protein 2 turnover and thereby promotes
emphysema
JOURNAL JCI Insight 5 (2), 125895 (2020)
PUBMED 31996486
REMARK GeneRIF: Cigarette smoke exposure enhances transforming acidic
coiled-coil-containing protein 2 turnover and thereby promotes
emphysema.
Publication Status: Online-Only
REFERENCE 4 (bases 1 to 9382)
AUTHORS Shakya,M., Zhou,A., Dai,D., Zhong,Q., Zhou,Z., Zhang,Y., Li,X.,
Bholee,A.K. and Chen,M.
TITLE High expression of TACC2 in hepatocellular carcinoma is associated
with poor prognosis
JOURNAL Cancer Biomark 22 (4), 611-619 (2018)
PUBMED 29843208
REMARK GeneRIF: This finding suggests that TACC2 may be a useful tool as a
candidate biomarker to predict the recurrence and prognosis of
hepatocellular carcinoma.
REFERENCE 5 (bases 1 to 9382)
AUTHORS Yoshida,E., Terao,Y., Hayashi,N., Mogushi,K., Arakawa,A.,
Tanaka,Y., Ito,Y., Ohmiya,H., Hayashizaki,Y., Takeda,S., Itoh,M.
and Kawaji,H.
TITLE Promoter-level transcriptome in primary lesions of endometrial
cancer identified biomarkers associated with lymph node metastasis
JOURNAL Sci Rep 7 (1), 14160 (2017)
PUBMED 29074988
REMARK GeneRIF: TACC2 protein is expressed mainly in the nucleus of the
endometrial cancer cells.
Publication Status: Online-Only
REFERENCE 6 (bases 1 to 9382)
AUTHORS Gergely,F., Karlsson,C., Still,I., Cowell,J., Kilmartin,J. and
Raff,J.W.
TITLE The TACC domain identifies a family of centrosomal proteins that
can interact with microtubules
JOURNAL Proc Natl Acad Sci U S A 97 (26), 14352-14357 (2000)
PUBMED 11121038
REFERENCE 7 (bases 1 to 9382)
AUTHORS Chen,H.M., Schmeichel,K.L., Mian,I.S., Lelievre,S., Petersen,O.W.
and Bissell,M.J.
TITLE AZU-1: a candidate breast tumor suppressor and biomarker for tumor
progression
JOURNAL Mol Biol Cell 11 (4), 1357-1367 (2000)
PUBMED 10749935
REFERENCE 8 (bases 1 to 9382)
AUTHORS Gergely,F., Kidd,D., Jeffers,K., Wakefield,J.G. and Raff,J.W.
TITLE D-TACC: a novel centrosomal protein required for normal spindle
function in the early Drosophila embryo
JOURNAL EMBO J 19 (2), 241-252 (2000)
PUBMED 10637228
REFERENCE 9 (bases 1 to 9382)
AUTHORS Still,I.H., Hamilton,M., Vince,P., Wolfman,A. and Cowell,J.K.
TITLE Cloning of TACC1, an embryonically expressed, potentially
transforming coiled coil containing gene, from the 8p11 breast
cancer amplicon
JOURNAL Oncogene 18 (27), 4032-4038 (1999)
PUBMED 10435627
REFERENCE 10 (bases 1 to 9382)
AUTHORS Still,I.H., Vince,P. and Cowell,J.K.
TITLE The third member of the transforming acidic coiled coil-containing
gene family, TACC3, maps in 4p16, close to translocation
breakpoints in multiple myeloma, and is upregulated in various
cancer cell lines
JOURNAL Genomics 58 (2), 165-170 (1999)
PUBMED 10366448
COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The
reference sequence was derived from AL731566.7, AC063960.10 and
AL135793.13.
On or before Apr 18, 2025 this sequence version replaced
XM_047424453.1, XM_054364522.1.
Summary: Transforming acidic coiled-coil proteins are a conserved
family of centrosome- and microtubule-interacting proteins that are
implicated in cancer. This gene encodes a protein that concentrates
at centrosomes throughout the cell cycle. This gene lies within a
chromosomal region associated with tumorigenesis. Expression of
this gene is induced by erythropoietin and is thought to affect the
progression of breast tumors. Several transcript variants encoding
different isoforms have been found for this gene. [provided by
RefSeq, Jul 2008].
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
RNAseq introns :: single sample supports all introns SAMEA2151741,
SAMEA2155550 [ECO:0000348]
##Evidence-Data-END##
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-79 AL731566.7 103589-103667
80-157 AC063960.10 167629-167706 c
158-217 AC063960.10 156490-156549 c
218-330 AC063960.10 139093-139205 c
331-5643 AC063960.10 101684-106996 c
5644-5757 AC063960.10 101052-101165 c
5758-5883 AC063960.10 56909-57034 c
5884-6020 AL135793.13 37085-37221
6021-7332 AL135793.13 52442-53753
7333-7393 AL135793.13 57436-57496
7394-7595 AL135793.13 58672-58873
7596-7657 AL135793.13 66771-66832
7658-7773 AL135793.13 68411-68526
7774-7945 AL135793.13 69882-70053
7946-8086 AL135793.13 71391-71531
8087-8176 AL135793.13 72396-72485
8177-8320 AL135793.13 79440-79583
8321-8397 AL135793.13 80006-80082
8398-8441 AL135793.13 84003-84046
8442-8602 AL135793.13 90688-90848
8603-8709 AL135793.13 91095-91201
8710-8830 AL135793.13 91589-91709
8831-9382 AL135793.13 96036-96587
FEATURES Location/Qualifiers
source 1..9382
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="10"
/map="10q26.13"
gene 1..9382
/gene="TACC2"
/gene_synonym="AZU-1; ECTACC"
/note="transforming acidic coiled-coil containing protein
2"
/db_xref="GeneID:10579"
/db_xref="HGNC:HGNC:11523"
/db_xref="MIM:605302"
exon 1..79
/gene="TACC2"
/gene_synonym="AZU-1; ECTACC"
/inference="alignment:Splign:2.1.0"
exon 80..157
/gene="TACC2"
/gene_synonym="AZU-1; ECTACC"
/inference="alignment:Splign:2.1.0"
misc_feature 116..118
/gene="TACC2"
/gene_synonym="AZU-1; ECTACC"
/note="upstream in-frame stop codon"
CDS 125..8896
/gene="TACC2"
/gene_synonym="AZU-1; ECTACC"
/note="isoform i is encoded by transcript variant 9; anti
zuai-1"
/codon_start=1
/product="transforming acidic coiled-coil-containing
protein 2 isoform i"
/protein_id="NP_001425293.1"
/db_xref="GeneID:10579"
/db_xref="HGNC:HGNC:11523"
/db_xref="MIM:605302"
/translation="
MGNENSTSDNQQEDSVLHNVILWPPNPEPTQRTLSAQTPRSAQPPGNSQNIKRKQQDTPGSPDHRDASSIGSVGLGGFCTASESSASLDPCLVSPEVTEPRKDPQGARGPEGSLLPSPPPSQEREHPSSSMPFAECPPEGCLASPAAAPEDGPQTQSPRREPAPNAPGDIAAAFPAERDSSTPYQEIAAVPSAGRERQPKEEGQKSSFSFSSGIDQSPGMSPVPLREPMKAPLCGEGDQPGGFESQEKEAAGGFPPAESRQGVASVQVTPEAPAAAQQGTESSAVLEKSPLKPMAPIPQDPAPRASDRERGQGEAPPQYLTDDLEFLRACHLPRSNSGAAPEAEVNAASQESCQQPVGAYLPHAELPWGLPSPALVPEAGGSGKEALDTIDVQGHPQTGMRGTKPNQVVCVAAGGQPEGGLPVSPEPSLLTPTEEAHPASSLASFPAAQIPIAVEEPGSSSRESVSKAGMPVSADAAKEVVDAGLVGLERQVSDLGSKGEHPEGDPGEVPAPSPQERGEHLNTEQSHEVQPGVPPPPLPKEQSHEVQPGAPPPPLPKAPSESARGPPGPTDGAKVHEDSTSPAVAKEGSRSPGDSPGGKEEAPEPPDGGDPGNLQGEDSQAFSSKRDPEVGKDELSKPSSDAESRDHPSSHSAQPPRKGGAGHTDGPHSQTAEADASGLPHKLGEEDPVLPPVPDGAGEPTVPEGAIWEGSGLQPKCPDTLQSREGLGRMESFLTLESEKSDFPPTPVAEVAPKAQEGESTLEIRKMGSCDGEGLLTSPDQPRGPACDASRQEFHAGVPHPPQGENLAADLGLTALILDQDQQGIPSCPGEGWIRGAASEWPLLSSEKHLQPSQAQPETSIFDVLKEQAQPPENGKETSPSHPGFKDQGADSSQIHVPVEPQEDNNLPTHGGQEQALGSELQSQLPKGTLSDTPTSSPTDMVWESSLTEESELSAPTRQKLPALGEKRPEGACGDGQSSRVSPPAADVLKDFSLAGNFSRKETCCTGQGPNKSQQALADALEEGSQHEEACQRHPGASEAADGCSPLWGLSKREMASGNTGEAPPCQPDSVALLDAVPCLPALAPASPGVTPTQDAPETEACDETQEGRQQPVPAPQQKMECWATSDAESPKLLASFPSAGEQGGEAGAAETGGSAGAGDPGKQQAPEKPGEATLSCGLLQTEHCLTSGEEASTSALRESCQAEHPMASCQDALLPARELGGIPRSTMDFSTHQAVPDPKELLLSGPPEVAAPDTPYLHVDSAAQRGAEDSGVKAVSSADPRAPGESPCPVGEPPLALENAASLKLFAGSLAPLLQPGAAGGEIPAVQASSGSPKARTTEGPVDSMPCLDRMPLLAKGKQATGEEKAATAPGAGAKASGEGMAGDAAGETEGSMERMGEPSQDPKQGTSGGVDTSSEQIATLTGFPDFREHIAKIFEKPVLGALATPGEKAGAGRSAVGKDLTRPLGPEKLLDGPPGVDVTLLPAPPARLQVEKKQQLAGEAEISHLALQDPASDKLLGPAGLTWERNLPGAGVGKEMAGVPPTLREDERPEGPGAAWPGLEGQAYSQLERSRQELASGLPSPAATQELPVERAAAFQVAPHSHGEEAVAQDRIPSGKQHQETSACDSPHGEDGPGDFAHTGVPGHVPRSTCAPSPQREVLTVPEANSEPWTLDTLGGERRPGVTAGILEMRNALGNQSTPAPPTGEVADTPLEPGKVAGAAGEAEGDITLSTAETQACASGDLPEAGTTRTFSVVAGDLVLPGSCQDPACSDKAPGMEGTAALHGDSPARPQQAKEQPGPERPIPAGDGKVCVSSPPEPDETHDPKLQHLAPEELHTDRESPRPGPSMLPSVPKKDAPRVMDKVTSDETRGAEGTESSPVADDIIQPAAPADLESPTLAASSYHGDVVGQVSTDLIAQRSSDSEEAFETPESTTPVKAPPAPPPPPPEVIPEPEVSTQPPPEEPGCGSETVPVPDGPRSDSVEGSPFRPPSHSFSAVFDEDKPIASSGTYNLDFDNIELVDTFQTLEPRASDAKNQEGKVNTRRKSTDSVPISKSTLSRSLSLQASDFDGASSSGNPEAVALAPDAYSTGSSSASSTLKRTKKPRPPSLKKKQTTKKPTETPPVKETQQEPDEESLVPSGENLASETKTESAKTEGPSPALLEETPLEPAVGPKAACPLDSESAEGVVPPASGGGRVQNSPPVGRKTLPLTTAPEAGEVTPSDSGGQEDSPAKGLSVRLEFDYSEDKSSWDNQQENPPPTKKIGKKPVAKMPLRRPKMKKTPEKLDNTPASPPRSPAEPNDIPIAKGTYTFDIDKWDDPNFNPFSSTSKMQESPKLPQQSYNFDPDTCDESVDPFKTSSKTPSSPSKSPASFEIPASAMEANGVDGDGLNKPAKKKKTPLKTDTFRVKKSPKRSPLSDPPSQDPTPAATPETPPVISAVVHATDEEKLAVTNQKWTCMTVDLEADKQDYPQPSDLSTFVNETKFSSPTEELDYRNSYEIEYMEKIGSSLPQDDDAPKKQALYLMFDTSQESPVKSSPVRMSESPTPCSGSSFEETEALVNTAAKNQHPVPRGLAPNQESHLQVPEKSSQKELEAMGLGTPSEAIEITAPEGSFASADALLSRLAHPVSLCGALDYLEPDLAEKNPPLFAQKLQEELEFAIMRIEALKLARQIALASRSHQDAKREAAHPTDVSISKTALYSRIGTAEVEKPAGLLFQQPDLDSALQIARAEIITKEREVSEWKDKYEESRREVMEMRKIVAEYEKTIAQMIEDEQREKSVSHQTVQQLVLEKEQALADLNSVEKSLADLFRRYEKMKEVLEGFRKNEEVLKRCAQEYLSRVKKEEQRYQALKVHAEEKLDRANAEIAQVRGKAQQEQAAHQASLRKEQLRVDALERTLEQKNKEIEELTKICDELIAKMGKS"
exon 158..217
/gene="TACC2"
/gene_synonym="AZU-1; ECTACC"
/inference="alignment:Splign:2.1.0"
exon 218..330
/gene="TACC2"
/gene_synonym="AZU-1; ECTACC"
/inference="alignment:Splign:2.1.0"
exon 331..5643
/gene="TACC2"
/gene_synonym="AZU-1; ECTACC"
/inference="alignment:Splign:2.1.0"
exon 5644..5757
/gene="TACC2"
/gene_synonym="AZU-1; ECTACC"
/inference="alignment:Splign:2.1.0"
exon 5758..5883
/gene="TACC2"
/gene_synonym="AZU-1; ECTACC"
/inference="alignment:Splign:2.1.0"
exon 5884..6020
/gene="TACC2"
/gene_synonym="AZU-1; ECTACC"
/inference="alignment:Splign:2.1.0"
exon 6021..7332
/gene="TACC2"
/gene_synonym="AZU-1; ECTACC"
/inference="alignment:Splign:2.1.0"
exon 7333..7393
/gene="TACC2"
/gene_synonym="AZU-1; ECTACC"
/inference="alignment:Splign:2.1.0"
exon 7394..7595
/gene="TACC2"
/gene_synonym="AZU-1; ECTACC"
/inference="alignment:Splign:2.1.0"
exon 7596..7657
/gene="TACC2"
/gene_synonym="AZU-1; ECTACC"
/inference="alignment:Splign:2.1.0"
exon 7658..7773
/gene="TACC2"
/gene_synonym="AZU-1; ECTACC"
/inference="alignment:Splign:2.1.0"
exon 7774..7945
/gene="TACC2"
/gene_synonym="AZU-1; ECTACC"
/inference="alignment:Splign:2.1.0"
exon 7946..8086
/gene="TACC2"
/gene_synonym="AZU-1; ECTACC"
/inference="alignment:Splign:2.1.0"
exon 8087..8176
/gene="TACC2"
/gene_synonym="AZU-1; ECTACC"
/inference="alignment:Splign:2.1.0"
exon 8177..8320
/gene="TACC2"
/gene_synonym="AZU-1; ECTACC"
/inference="alignment:Splign:2.1.0"
exon 8321..8397
/gene="TACC2"
/gene_synonym="AZU-1; ECTACC"
/inference="alignment:Splign:2.1.0"
exon 8398..8441
/gene="TACC2"
/gene_synonym="AZU-1; ECTACC"
/inference="alignment:Splign:2.1.0"
exon 8442..8602
/gene="TACC2"
/gene_synonym="AZU-1; ECTACC"
/inference="alignment:Splign:2.1.0"
exon 8603..8709
/gene="TACC2"
/gene_synonym="AZU-1; ECTACC"
/inference="alignment:Splign:2.1.0"
exon 8710..8830
/gene="TACC2"
/gene_synonym="AZU-1; ECTACC"
/inference="alignment:Splign:2.1.0"
exon 8831..9382
/gene="TACC2"
/gene_synonym="AZU-1; ECTACC"
/inference="alignment:Splign:2.1.0"
regulatory 9024..9029
/regulatory_class="polyA_signal_sequence"
/gene="TACC2"
/gene_synonym="AZU-1; ECTACC"
/note="hexamer: AATAAA"
polyA_site 9051
/gene="TACC2"
/gene_synonym="AZU-1; ECTACC"
regulatory 9354..9359
/regulatory_class="polyA_signal_sequence"
/gene="TACC2"
/gene_synonym="AZU-1; ECTACC"
/note="hexamer: AATAAA"
polyA_site 9382
/gene="TACC2"
/gene_synonym="AZU-1; ECTACC"
/note="major polyA site"
ORIGIN
agtgctgaaaaggagcctctggaagagagggccttctcccgcttctctcctcctcctctccacgctggggggatcctggtcacctctgacaaaattctggggacgctgggaacactgaatcaacatgggcaatgagaacagcacctcggacaaccagcaggaggactccgtcttgcataacgtcattctgtggcctccaaaccctgagcccacacagaggactttatcagctcagactccaaggtccgcgcagccacccgggaacagtcagaatataaaaaggaagcagcaggacacgcccggaagccctgaccacagagacgcgtccagcattggcagcgttgggcttggaggcttctgcaccgcttctgagagttctgccagcctggatccatgccttgtgtccccagaggtgactgagccaaggaaggacccacagggagccagggggccagaaggttctttgctgcccagcccaccaccgtcccaggagcgagagcacccctcgtcctccatgccctttgccgagtgtcccccggaaggttgcttggcaagtccagcagcggcacctgaagatggtcctcagactcagtctcccaggagggaacctgccccaaatgccccaggagacatcgcggcggcatttcccgctgagagggacagctctactccataccaagagattgctgccgtccccagtgctggaagagagagacagccgaaggaagaaggacagaagtcctccttctccttctccagtggcatcgaccagtcacctggaatgtcgccagtacccctcagagagccaatgaaggcaccgctgtgtggagagggggaccagcctggtggttttgagtcccaagagaaagaggctgcaggtggctttccccctgcagagtccaggcagggggtggcttctgtgcaagtgacccctgaggcccctgctgcagcccagcagggcacagaaagctcagcggtcttggagaagtcccccctaaaacccatggccccgatcccacaagatccagccccaagagcctcagacagagaaagaggccaaggggaggcgccgcctcagtatttaacagatgacttggaattcctcagggcctgccatctccctaggagcaattcaggggctgccccagaagcagaagtgaatgccgcttcccaggagagctgccagcagccagtgggagcatatctgccgcacgcagagctgccctggggcttgccaagtcctgccctggtgccagaggctgggggctctgggaaggaggctctggacaccattgatgttcagggtcacccacagacagggatgcgaggaaccaagcccaatcaagttgtctgtgtggcagcaggcggccagcccgaagggggtttgcctgtgagccctgaaccttccctgctcactccgactgaggaagcacatccagcttcaagcctcgcttcattcccagctgctcagattcctattgctgtagaagaacctggatcatcatccagggaatcagtttccaaggctgggatgccagtttctgcagatgcagccaaagaggtggtggatgcagggttggtgggactggagaggcaggtgtcagatcttggaagcaagggagagcatccagaaggggaccctggagaggttcctgccccatcaccccaggagaggggagagcacttgaacacggagcaaagccatgaggtccaaccaggagtaccaccccctcctcttcccaaggagcaaagccatgaggtccaaccaggagcaccaccccctcctcttcccaaggcaccaagtgaaagtgccagagggccaccggggccaacggatggagccaaggtccatgaagattccacaagcccagccgtggctaaagaaggaagcagatcacctggtgacagccctggaggaaaggaggaagccccagagccacctgatggtggagacccagggaacctgcaaggagaggactctcaggctttcagcagcaagcgtgatccagaagtaggcaaagatgagctttcaaagccaagcagtgatgcagagagcagagaccatcccagctcacactcagcacagccacccagaaaggggggtgctgggcacacggacgggccccactctcagacagcagaggctgatgcatctggcctaccacacaagctgggtgaggaggaccccgtcctgccccctgtgccagatggagctggtgagcccactgttcccgaaggagccatctgggaggggtcaggattgcagcccaaatgtcctgacacccttcagagcagggaaggattgggaagaatggagtctttcctgactttagaatcagagaaatcagattttccaccaactcctgttgcagaggttgcacccaaagcccaggaaggtgagagcacattggaaataaggaagatgggcagctgtgatggggagggcttgctgacgtccccagatcaaccccgcgggccggcgtgtgatgcgtcgagacaggaatttcatgctggggtgccacatcccccccagggggagaacttggcagcagacctggggctcacggcactcatcctggaccaagatcagcagggaatcccatcctgcccaggggaaggctggataagaggagctgcatccgagtggcccctactatcttctgagaagcatctccagccatcccaggcacaaccagagacatccatctttgacgtgctcaaggagcaggcccagccacctgaaaatgggaaagagacttctccaagccatccaggttttaaggaccagggagcagattcttcccaaatccatgtacctgtggaacctcaggaagataacaacttgcccactcatggaggacaggagcaggctttgggatcagaacttcaaagtcagctccccaaaggcaccctgtctgatactccaacttcatctcccactgacatggtttgggagagttctctgacagaagagtcagaattgtcagcaccaacgagacagaagttgcctgcactaggggagaagcggccagagggagcatgcggtgatggtcagtcctcgagggtctcgcctccagcagcagatgtcttaaaagacttttctcttgcagggaacttcagcagaaaggaaacttgctgcactgggcaggggccaaacaagtctcaacaggcattggctgatgccttggaagaaggcagccagcatgaagaagcatgtcaaaggcatccaggagcttctgaagcagctgatggttgttccccactctggggcttgagtaagagggagatggcaagtggaaacacaggggaggccccaccttgtcagcctgactcagtagctctcctggatgcagttccctgcctgccagccctggcgcccgccagccccggagtcacacccacccaggatgccccagagacagaggcatgtgatgaaacccaggaaggcaggcagcaaccagtgccggccccgcagcagaaaatggagtgctgggccacttcggatgcagagtccccaaagcttcttgcaagtttcccatcagctggggagcaaggtggtgaagccggggctgctgagactggtggcagcgctggtgcaggagacccaggaaagcagcaggctccggagaaacctggagaagctactttgagttgtggcctccttcagactgagcactgccttacctccggggaggaagcttctacctctgccctacgtgagtcctgccaagctgagcaccccatggccagctgccaggatgccttgctgccagccagagagctgggtgggattcccaggagcaccatggatttttctacacaccaggctgtcccagacccaaaggagctcctgctgtctgggccaccagaagtggctgctcctgacaccccttacctgcatgtcgacagtgctgcccagagaggagcagaagacagtggagtgaaagctgtttcctctgcagaccccagagctcctggcgaaagcccctgtcctgtaggggagcccccacttgccttggaaaatgctgcctccttgaagctgtttgctggctccctcgcccccctgttgcaaccaggagctgcaggtggggaaatccctgcagtgcaagccagcagtggtagtcccaaagccagaaccactgagggaccagtggactccatgccatgcctggaccggatgccacttctggccaagggcaagcaggcaacaggggaagagaaagcagcaacagctccaggtgcaggtgccaaggccagtggggagggcatggcaggtgatgcagcaggagagacagagggcagcatggagaggatgggagagccttcccaggacccaaagcagggcacatcaggtggtgtggacacaagctctgagcaaatcgccaccctcactggcttcccagacttcagggagcacatcgccaagatcttcgagaagcctgtgctcggagccctggccacacctggagaaaaggcaggagctgggaggagtgcagtgggtaaagacctcaccaggccattgggcccagagaagcttctagatgggcctccaggagtggatgtcacccttctccctgcacctcctgctcgactccaggtggagaagaagcaacagttggctggagaggctgagatttcccatctggctctgcaagatccagcttcagacaagcttctgggtccagcagggctgacctgggagcggaacttgccaggtgccggtgtggggaaggagatggcaggtgtcccacccacactgagggaagacgagaggccagaggggcctggggcagcctggccaggcctggaaggccaggcttactcacagctggagaggagcaggcaggaattagcttcaggtcttccttcaccagcagctactcaggagctccctgtggagagagctgctgccttccaggtggctccccatagccatggagaagaggccgtggcccaagacagaattccttctggaaagcagcaccaggaaacatctgcctgcgacagtccacatggagaagatggtcccggggactttgctcacacaggggttccaggacatgtgccaaggtccacgtgtgccccttctcctcagagggaggttttgactgtgcctgaggccaacagtgagccctggacccttgacacgcttgggggtgaaaggagacccggagtcactgctggcatcttggaaatgcgaaatgccctgggcaaccagagcacccctgcaccaccaactggagaagtggcagacactcccctggagcctggcaaggtggcaggcgctgctggggaagcagagggtgacatcaccctgagcacagctgagacacaggcatgtgcgtccggtgatctgcctgaagcaggtactacgaggacattctccgttgtggcaggtgacttggtgctgccaggaagctgtcaggacccagcctgctctgacaaggctccggggatggagggtacagctgcccttcatggggacagcccagccaggccccagcaggctaaggagcagccagggcctgagcgccccattccagctggggatgggaaggtgtgcgtctcctcacctccagagcctgacgaaactcacgacccgaagctgcaacatttggctccagaagagctccacactgacagagagagccccaggcctggcccatccatgttaccttcggttcctaagaaggatgctccaagagtcatggataaagtcacttcagatgagaccagaggtgcggaaggaacagaaagttcacctgtggcagatgatatcatccagcccgctgcccccgcagacctggaaagcccaaccttagctgcctcttcctaccacggtgatgttgttggccaggtctctacggatctgatagcccagaggagttccgattctgaagaggcatttgagaccccggagtcaacgacccctgtcaaagctccgccagctccacccccaccaccccccgaagtcatcccagaacccgaggtcagcacacagccacccccggaagaaccaggatgtggttctgagacagtccctgtccctgatggcccacggagcgactcggtggaaggaagtcccttccgtcccccgtcacactccttctctgccgtcttcgatgaagacaagccgatagccagcagtgggacttacaacttggactttgacaacattgagcttgtggatacctttcagaccttggagcctcgtgcctcagacgctaagaatcaggagggcaaagtgaacacacggaggaagtccacggattccgtccccatctctaagtctacactgtcccggtcgctcagcctgcaagccagtgactttgatggtgcttcttcctcaggcaatcccgaggccgtggcccttgccccagatgcatatagcacgggttccagcagtgcttctagtacccttaagcgaactaaaaaaccgaggccgccttccttaaaaaagaaacagaccaccaagaaacccacagagacccccccagtgaaggagacgcaacaggagccagatgaagagagccttgtccccagtggggagaatctagcatctgagacgaaaacggaatctgccaagacggaaggtcctagcccagccttattggaggagacgccccttgagcccgctgtggggcccaaagctgcctgccctctggactcagagagtgcagaaggggttgtccccccggcttctggaggtggcagagtgcagaactcaccccctgtcgggaggaaaacgctgcctcttaccacggccccggaggcaggggaggtaaccccatcggatagcggggggcaagaggactctccagccaaagggctctccgtaaggctggagtttgactattctgaggacaagagtagttgggacaaccagcaggaaaacccccctcctaccaaaaagataggcaaaaagccagttgccaaaatgcccctgaggaggccaaagatgaaaaagacacccgagaaacttgacaacactcctgcctcacctcccagatcccctgctgaacccaatgacatccccattgctaaaggtacttacacctttgatattgacaagtgggatgaccccaattttaaccctttttcttccacctcaaaaatgcaggagtctcccaaactgccccaacaatcatacaactttgacccagacacctgtgatgagtccgttgacccctttaagacatcctctaagacccccagctcaccttctaaatccccagcctcctttgagatcccagccagtgctatggaagccaatggagtggacggggatgggctaaacaagcccgccaagaagaagaagacgcccctaaagactgacacatttagggtgaaaaagtcgccaaaacggtctcctctctctgatccaccttcccaggaccccaccccagctgctacaccagaaacaccaccagtgatctctgcggtggtccacgccacagatgaggaaaagctggcggtcaccaaccagaagtggacgtgcatgacagtggacctagaggctgacaaacaggactacccgcagccctcggacctgtccacctttgtaaacgagaccaaattcagttcacccactgaggagttggattacagaaactcctatgaaattgaatatatggagaaaattggctcctccttacctcaggacgacgatgccccgaagaagcaggccttgtaccttatgtttgacacttctcaggagagccctgtcaagtcatctcccgtccgcatgtcagagtccccgacgccgtgttcagggtcaagttttgaagagactgaagcccttgtgaacactgctgcgaaaaaccagcatcctgtcccacgaggactggcccctaaccaagagtcacacttgcaggtgccagagaaatcctcccagaaggagctggaggccatgggcttgggcaccccttcagaagcgattgaaattacagctcccgagggctcctttgcctctgctgacgccctcctcagcaggctagctcaccccgtctctctctgtggtgcacttgactatctggagcccgacttagcagaaaagaaccccccactattcgctcagaaactccaggaggagttagagtttgccatcatgcggatagaagccctgaagctggccaggcagattgctttggcttcccgcagccaccaggatgccaagagagaggctgctcacccaacagacgtctccatctccaaaacagccttgtactcccgcatcgggaccgctgaggtggagaaacctgcaggccttctgttccagcagcccgacctggactctgccctccagatcgccagagcagagatcataaccaaggagagagaggtctcagaatggaaagataaatatgaagaaagcaggcgggaagtgatggaaatgaggaaaatagtggccgagtatgagaagaccatcgctcagatgatagaggacgaacagagagagaagtcagtctcccaccagacggtgcagcagctggttctggagaaggagcaagccctggccgacctgaactccgtggagaagtctctggccgacctcttcagaagatatgagaagatgaaggaggtcctagaaggcttccgcaagaatgaagaggtgttgaagagatgtgcgcaggagtacctgtcccgggtgaagaaggaggagcagaggtaccaggccctgaaggtgcacgcggaggagaaactggacagggccaatgctgagattgctcaggttcgaggcaaggcccagcaggagcaagccgcccaccaggccagcctgcggaaggagcagctgcgagtggacgccctggaaaggacgctggagcagaagaataaagaaatagaagaactcaccaagatttgtgacgaactgattgccaaaatggggaaaagctaactctgaaccgaatgttttggacttaactgttgcgtgcaatatgaccgtcggcacactgctgttcctccagttccatggacaggttctgttttcactttttcgtatgcactactgtatttcctttctaaataaaattgatttgattgtatgcagtactaaggagactatcagaatttcttgctattggtttgcattttcctagtataattcatagcaagttgacctcagagttcctgtatcagggagattgtctgattctctaataaaagacacattgctgaccttggccttgccctttgtacacaagttcccagggtgagcagcttttggatttaatatgaacatgtacagcgtgcatagggactcttgccttaaggagtgtaaacttgatctgcatttgctgatttgtttttaaaaaaacaagaaatgcatgtttcaaataaaattctctattgtaaataaaattttttctttggatcttggcaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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