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Previous release (v1)
2026-10-15 17:56:16, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XM_040666921 2676 bp mRNA linear VRT 01-MAR-2022
DEFINITION PREDICTED: Gallus gallus uncharacterized LOC121110227
(LOC121110227), mRNA.
ACCESSION XM_040666921
VERSION XM_040666921.2
DBLINK BioProject: PRJNA698614
KEYWORDS RefSeq.
SOURCE Gallus gallus (chicken)
ORGANISM Gallus gallus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes;
Phasianidae; Phasianinae; Gallus.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_052575.1) annotated using gene prediction method: Gnomon,
supported by mRNA evidence.
Also see:
Documentation of NCBI's Annotation Process
On Mar 1, 2022 this sequence version replaced XM_040666921.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Gallus gallus Annotation Release 106
Annotation Version :: 106
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 9.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..2676
/organism="Gallus gallus"
/mol_type="mRNA"
/isolate="bGalGal1"
/db_xref="taxon:9031"
/chromosome="3"
/sex="female"
/tissue_type="blood"
/geo_loc_name="USA: Fayetteville"
/lat_lon="36.0822 N 94.1719 W"
/collection_date="20-May-2019"
/collected_by="Nick Anthony"
gene 1..2676
/gene="LOC121110227"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 1 mRNA, 7 long SRA reads, and 31%
coverage of the annotated genomic feature by RNAseq
alignments"
/db_xref="CGNC:90090"
/db_xref="GeneID:121110227"
CDS 1610..2095
/gene="LOC121110227"
/codon_start=1
/product="uncharacterized protein LOC121110227"
/protein_id="XP_040522855.1"
/db_xref="GeneID:121110227"
/db_xref="CGNC:90090"
/translation="
MLLEITGSAVHTEAGSVAGSRGPAVQRQREDGAGRGRGAAPSHGRLPPERGGGLEPGGRAESGSERGVAAVPSPGAPRARQSPAEGRGRSRALQGSADAAGARSGVTEQPSAPSSQLIAAKDPPAYEWSPRCLLQTFLQRAIPGRGELVSPKDELDKNYFF"
ORIGIN
aactttcatgtttttattgctgccttagaagcaattgataaacaatacacttcatatataaatgagcatgtgtcaatatatgacaacaaaaataaattacagtgacatagtatttaactttacaaggttgtacaaaatttccaaatatgaatagatttcaacttaaaaatttgaaataagttaaaacttcaactattctgaagacttgaaaaatatacatacaatttcaatcaatcacatcatttacagtatgattttttttaagctgttaatcgtatactcccatatattttataactgttttagtggaacatatcctgttatatgcagatttactgcactgggagggtgaaaggggttccctgagggcacagaacaggctttgagtgtttatattttatgtaatttgattacattcattaacaagaaatacaaaaccaaagcattatttatctgccctataaggtaagactgatttatctcctcttgctagaatttcccttgattctaatgagaattctgaagtatgattaacaacagcattgggccagactaagtctgttcagccaggataaattaggtcatattatttaatgaaatatgtgaagaatatctgttttgtgttagatctcattataggttacatatctggtcttgactatgcaccgagatatttgcttccacaactagtaggaaaatacatttgatacggcacttcaaagtaatagggtggattttggactgctattttaaacagctcagttatatgcacttgattactaaatgttatgaagattaaaaacacttgacaaatcccctcgcatgtaagtgtgtgagtaattcagaatgctgagggtccaattcaagccatacagtaaggtgtagaaagctcatactgcaacatcctgatacctaagttagtgtgtttaacacaaagctggtccaacagattctgtgctccatcaaaaggaaaaaaactcactgatacagtaactgtttgtgatgaaacagactgaggagatctaaacaaaatggcataggagaaaactgctcagctgtcaaaagtgcaggaagacgctggtgcagccagagatgagtctcagacccacaggaccatagaataattaaggttggaaaagaccaccaagatcacctagtccaaccaccagcacacccctaccatgcctgctaaccacgtctctcagtgccacaaccacacatttcctgaacacctcaagggatggtgactccaccacctcccttggcagcccgtgccactgcctcactgctcattctgagaagaaatgcttcctaacactcagcctgaacctcccctggcatagcttgagtccattacctctcgtctgatcactgttatctggcagaagaggccgactcccagcttaaattgtttgcagcgaattcagtattaaaggaaaaaagatccatgatgtctgcttataactgaattttctcttctctgaatacatttaaatgctgcatctgtaaactgcccttcctccaaacagacaagcgttatacatacatcatttaaaagggaagaaacatgagccagtgataagcaattcctcatttccatttttctctaatgctgctggaaataacgggtagtgcagtgcatactgaagctggcagtgtggcggggagccgcggcccagctgttcagcggcaacgggaggacggagccggcagagggcgcggggcagcgccgagccacggccgccttcccccggagcggggcggcgggctggagcccggaggccgggctgagagcgggtcagagcgcggtgtcgcggcagtgccgtctccgggagcgccgagggcacggcagagcccggccgagggcaggggccggagtcgggccctgcagggaagcgcggatgccgcgggagcacggagcggtgtcacggagcaaccgagcgcgccatcaagccagttgatagcagccaaagatcccccggcatacgagtggagtccacgttgccttctacaaactttcctgcagagagccatcccaggcagaggggaattagtgtcaccaaaggatgaacttgacaaaaactactttttctaaatcactcaccgcccttgctactcttaatctcaaataaccttgaagttattattattctttttttttttttctttttttttttcttgattgcttgttctgtgttctgccctgtgctggattgagagaggaaaaaggaacacggaaatacatttcaaaagttcatccaacgtctcatggttatgtaaagcttacatcaccaactgcttggcagacaatgtgttgtacaatcagatatgactttatatcacatcaattactttttatcttaactagcaagccactccatgagcagcaaggaaagaaatgagtttatcagcttatactaatgcaactgttatcaggggcatacagggtaaaaggcatttgtagattacaataataatatattttcaaggaaaattccacatgggaaggtgccacctgattagctttatatggagggatgaaaaaaaatacgtatgtataaataaatgaggatgttaaagtagtctggcagtacaaaatcccttaagagcacaatgctgcacaaagggagttcagtgggcaccaagtttgtgcagtgcatttgggctgatacccat
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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