2024-05-02 23:53:53, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001199521 2108 bp mRNA linear VRT 05-NOV-2021 DEFINITION Gallus gallus leucine zipper protein 2 (LUZP2), mRNA. ACCESSION NM_001199521 XM_420933 VERSION NM_001199521.2 KEYWORDS RefSeq. SOURCE Gallus gallus (chicken) ORGANISM Gallus gallus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus. REFERENCE 1 (bases 1 to 2108) AUTHORS Boardman PE, Sanz-Ezquerro J, Overton IM, Burt DW, Bosch E, Fong WT, Tickle C, Brown WR, Wilson SA and Hubbard SJ. TITLE A comprehensive collection of chicken cDNAs JOURNAL Curr Biol 12 (22), 1965-1969 (2002) PUBMED 12445392 COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JAENSK010000212.1. On Nov 5, 2021 this sequence version replaced NM_001199521.1. ##Evidence-Data-START## CDS exon combination :: HAEK01001471.1, HAEK01040797.1 [ECO:0000331] RNAseq introns :: single sample supports all introns SAMN08016554, SAMN08016668 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## inferred exon combination :: based on alignments, homology ##RefSeq-Attributes-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-234 JAENSK010000212.1 1455788-1456021 c 235-597 JAENSK010000212.1 1413420-1413782 c 598-715 JAENSK010000212.1 1360001-1360118 c 716-786 JAENSK010000212.1 1358471-1358541 c 787-868 JAENSK010000212.1 1355775-1355856 c 869-931 JAENSK010000212.1 1348767-1348829 c 932-994 JAENSK010000212.1 1327484-1327546 c 995-1057 JAENSK010000212.1 1325643-1325705 c 1058-1132 JAENSK010000212.1 1318406-1318480 c 1133-1297 JAENSK010000212.1 1315253-1315417 c 1298-1384 JAENSK010000212.1 1298541-1298627 c 1385-1462 JAENSK010000212.1 1289670-1289747 c 1463-2108 JAENSK010000212.1 1288531-1289176 c FEATURES Location/Qualifiers source 1..2108 /organism="Gallus gallus" /mol_type="mRNA" /db_xref="taxon:9031" /chromosome="5" /map="5" gene 1..2108 /gene="LUZP2" /note="leucine zipper protein 2" /db_xref="CGNC:3249" /db_xref="GeneID:423001" exon 1..234 /gene="LUZP2" /inference="alignment:Splign:2.1.0" exon 235..597 /gene="LUZP2" /inference="alignment:Splign:2.1.0" misc_feature 260..262 /gene="LUZP2" /note="upstream in-frame stop codon" CDS 536..1570 /gene="LUZP2" /codon_start=1 /product="leucine zipper protein 2" /protein_id="NP_001186450.1" /db_xref="CGNC:3249" /db_xref="GeneID:423001" /translation="
MKFLPAYYLLPLFPALVFSTRQGYEELERQLKEVFKERSNILRQLSKTSKELEGIKVNLQSLKNDEASARSDVQKLLELGQKQREEMKSLQEAFQKQLNEAVEKAEKQQATINFLKTEMERKSRMIRDLQNENKSLKNKLLSGNKLCGIHAEESKKIQAQLKELRYGKKDLIFKAQRLTDLEQKLAAAKDELEKAALDKESQLKALKDTVQLCLSSVLHNQPPTIHRIPPKPAEKLTSSATKGSKVQFPVINPKQNASAEKESLHVASRKEENQSVQECDSQDVGKTCLGNYNNSTSHLKMEETETSLQQMLRNPPWTKPEDKKPPERSEKKFEDSVGTKEKKL"
misc_feature <608..>1180 /gene="LUZP2" /note="Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]; Region: Smc; COG1196" /db_xref="CDD:224117" exon 598..715 /gene="LUZP2" /inference="alignment:Splign:2.1.0" exon 716..786 /gene="LUZP2" /inference="alignment:Splign:2.1.0" exon 787..868 /gene="LUZP2" /inference="alignment:Splign:2.1.0" exon 869..931 /gene="LUZP2" /inference="alignment:Splign:2.1.0" exon 932..994 /gene="LUZP2" /inference="alignment:Splign:2.1.0" exon 995..1057 /gene="LUZP2" /inference="alignment:Splign:2.1.0" exon 1058..1132 /gene="LUZP2" /inference="alignment:Splign:2.1.0" exon 1133..1297 /gene="LUZP2" /inference="alignment:Splign:2.1.0" exon 1298..1384 /gene="LUZP2" /inference="alignment:Splign:2.1.0" exon 1385..1462 /gene="LUZP2" /inference="alignment:Splign:2.1.0" exon 1463..2108 /gene="LUZP2" /inference="alignment:Splign:2.1.0" ORIGIN
acctatgatggggaacaacaaagagtttcttgcagctttcaaggcctttgtagggcagacgtgtgtttgcagacagtctgttcagtttaataacctcagcacatctttcacgtaatggttccttgactggctcctagctccactcagctaattgaaaccactgcagttcaagagcacagccctgtagtcttcattaaacatcaaggctgctatctgaggatccgcacctagcaggctgaatccctaagccctgctgccataacctcaaagccaagtgccagctgctgcctgcccgtccctccccatccaccactaccaaaccctccaggacgcggttggaggcagcacgctgactgatcgcctcaagcaggctgtgggctcgcagcagcagcagctcgctgcctctgacatcactcccggagctcacatcccactccgagctcctctcgttagtcggtccgtcggtcgggagaggaggcaggagacgctgcgaagaggatcgctgaggaacagaacgaaacagaggggctacatcatgaaattcctccctgcttattacttgctgcctctttttcctgcgctggtcttcagcactagacagggctatgaagaactggagagacagctgaaggaagtctttaaggaaaggagcaatattcttcgtcaactgtcgaagacctctaaagaactcgagggaattaaagtaaacctccagtccctgaaaaacgatgaagcatcagccagaagtgatgtgcagaaacttcttgaactgggccaaaagcaaagggaagaaatgaaatctcttcaggaggcctttcaaaagcagcttaatgaggcagttgagaaggcagaaaagcagcaagctactattaattttttgaagacagaaatggaaaggaagagcagaatgatccgggacctccaaaatgagaacaaaagcctcaaaaacaagctgctgtcaggaaacaagctttgtggtattcacgcagaagagtcaaaaaagatccaagcccagctgaaagaacttcgttatggcaaaaaagatttgattttcaaggcacaacggctaacagacctggagcagaaactagcagctgcaaaagatgaattggaaaaggcagcccttgacaaggagtcgcagctgaaagctctgaaggacactgtgcagctttgcctgtcctctgttctgcacaatcagcctcccactatccatcgaatccctccaaaaccagcagagaagctgacatcctcagctacaaagggctcgaaagttcaatttccagtgataaaccccaagcaaaatgcctcagcagagaaagagagtctgcacgtggcctcaagaaaggaagaaaaccagagtgtgcaggaatgtgattctcaggatgttggcaagacatgtttggggaattacaataattcaacatctcatttgaagatggaagaaacagagacaagcttgcagcagatgttgcgcaacccaccatggactaaacctgaagacaaaaaaccacctgaaagaagtgagaagaagtttgaagattctgttggcacaaaagaaaagaaactgtaaatgccactaatacacatttacaaacgttcatcacttgcttccaacttcgcattctttttagtccataggcaagaataaaccaggtttctaaagcatgcatttttcactattttatgaatgtttgttagctagtctagcatagatcaattagtacctttcagcaataatccaaaatggatgtttgaagaattgctttgtaatacagtccagtttttgaactattatatctgacttagtaattacatactataaattagtttctttgttaaaaaaaagccattcccaagtattttcttagtccgttctatttaatgtacctttttgtcagattaggttttagattaagaattaaggggcagtgaatgcagaaaaaataataattaaaaatctatgtaaacctagtcagagtacaatgcaactcataacgataaatgtaaagatgggacaatagggctccatgtatacttgactatgagtaataccatttcaaatctgcttacttaaacaataaagtatgtttggttgctgttttttctaa
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@meso_cacase at
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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