LOCUS       NM_001031214            4270 bp    mRNA    linear   VRT 23-SEP-2023
DEFINITION  Gallus gallus glia maturation factor beta (GMFB), mRNA.
ACCESSION   NM_001031214 XM_421451
VERSION     NM_001031214.2
KEYWORDS    RefSeq.
SOURCE      Gallus gallus (chicken)
  ORGANISM  Gallus gallus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes;
            Phasianidae; Phasianinae; Gallus.
REFERENCE   1  (bases 1 to 4270)
  AUTHORS   Tang H, Finn RD and Thomas PD.
  TITLE     TreeGrafter: phylogenetic tree-based annotation of proteins with
            Gene Ontology terms and other annotations
  JOURNAL   Bioinformatics 35 (3), 518-520 (2019)
   PUBMED   30032202
REFERENCE   2  (bases 1 to 4270)
  AUTHORS   Burge S, Kelly E, Lonsdale D, Mutowo-Muellenet P, McAnulla C,
            Mitchell A, Sangrador-Vegas A, Yong SY, Mulder N and Hunter S.
  TITLE     Manual GO annotation of predictive protein signatures: the InterPro
            approach to GO curation
  JOURNAL   Database (Oxford) 2012, bar068 (2012)
   PUBMED   22301074
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 4270)
  AUTHORS   Caldwell RB, Kierzek AM, Arakawa H, Bezzubov Y, Zaim J, Fiedler P,
            Kutter S, Blagodatski A, Kostovska D, Koter M, Plachy J, Carninci
            P, Hayashizaki Y and Buerstedde JM.
  TITLE     Full-length cDNAs from chicken bursal lymphocytes to facilitate
            gene function analysis
  JOURNAL   Genome Biol 6 (1), R6 (2005)
   PUBMED   15642098
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAENSK010000215.1.
            
            On Sep 23, 2021 this sequence version replaced NM_001031214.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AJ720612.1, SRR13267649.95282.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA103992290, SAMEA103992323
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-84                JAENSK010000215.1  27006132-27006215
            85-181              JAENSK010000215.1  27007550-27007646
            182-231             JAENSK010000215.1  27008106-27008155
            232-281             JAENSK010000215.1  27009105-27009154
            282-364             JAENSK010000215.1  27010220-27010302
            365-438             JAENSK010000215.1  27011811-27011884
            439-4270            JAENSK010000215.1  27013840-27017671
FEATURES             Location/Qualifiers
     source          1..4270
                     /organism="Gallus gallus"
                     /mol_type="mRNA"
                     /db_xref="taxon:9031"
                     /chromosome="5"
                     /map="5"
     gene            1..4270
                     /gene="GMFB"
                     /note="glia maturation factor beta"
                     /db_xref="CGNC:51994"
                     /db_xref="GeneID:423560"
     exon            1..84
                     /gene="GMFB"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    25..27
                     /gene="GMFB"
                     /note="upstream in-frame stop codon"
     CDS             82..510
                     /gene="GMFB"
                     /codon_start=1
                     /product="glia maturation factor beta"
                     /protein_id="NP_001026385.1"
                     /db_xref="CGNC:51994"
                     /db_xref="GeneID:423560"
                     /translation="

MSESLVVCDVAEDLVEKLRKFRFRKETNNAAIIMKIDKDKQLVVLDEEHEGISPDELKDELPERQPRFIVYSYKYQHEDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNKLVQTAELTKVFEIRNTEDLTEEWLREKLGFFH"

     misc_feature    106..471
                     /gene="GMFB"
                     /note="ADF-homology domain of glia maturation factor beta
                     and related proteins; Region: ADF_GMF-beta_like; cd11283"
                     /db_xref="CDD:200439"
     exon            85..181
                     /gene="GMFB"
                     /inference="alignment:Splign:2.1.0"
     exon            182..231
                     /gene="GMFB"
                     /inference="alignment:Splign:2.1.0"
     exon            232..281
                     /gene="GMFB"
                     /inference="alignment:Splign:2.1.0"
     exon            282..364
                     /gene="GMFB"
                     /inference="alignment:Splign:2.1.0"
     exon            365..438
                     /gene="GMFB"
                     /inference="alignment:Splign:2.1.0"
     exon            439..4270
                     /gene="GMFB"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

ggcgcagtggggagggcagctcagtgaggaggcggcggggcggcggcgcggacggttgtggtgttggcgcgcgcgctcaagatgagtgaatctctggtggtttgtgatgttgctgaagacctggtggagaagctgcgaaaattccggttccgtaaagaaaccaacaatgctgccattataatgaaaatcgacaaggataagcagttggtggtactggatgaggagcatgagggtatttctccagatgagctaaaagatgagctgcctgagagacaacctcgatttattgtgtacagttacaagtatcagcacgaagatggaagagtttcttatccattgtgctttatcttctccagtcctgttggatgcaagcctgagcagcagatgatgtatgctgggagcaagaataagcttgtacagacagctgaactcactaaggtatttgaaataagaaatacagaagatctaaccgaagaatggctgcgtgagaaactgggcttcttccattaagaaaacctctgtaatgagtatttatgtaccatcctgatcatactggaaccagacatgaatacttacagctaaaaatgcactgtatttacatctgtttcctgcagtatgtctcttgtgcaaagaatagcaggtctgtctccttgaagtaacagatctttgcagatgtttccttatgtgtacctgttaaaagggaatactcctctgcagggaatccttttgcactcttgtgactaatatttctacaattaaaatagttcagttctgaatttatagctatatacaggcataatttggaagctgatgctaactctttctgagctacaaatgcatccttacgacgtatactagtcatttatatgcaaaaactgtgtactgtcattgtcagaatttatgatgtcctctcaactttgaaaactattccctaggagcatttagtgttcaacagacaaaatccttgtacagcgaatctacctatgtaccctctgtgttatgtccatgtgaactttctcaaattcttggaactaattcttgtcattccagtaattcctcagctcactgaggcagtcgtactaaatttcagggcaaagctttgactgtccaattctcatgctgatacagtcttacagggactagaagatcactaagggctgaattatgactctggttcctctcataccagatgtcttgcgtatgtaacttactacactgttaagaagtttacctctttgctcctttcctcttatacgaacacctgtgaatactgtgtgcctttaatttgttagctttaaaatgacttgagaattttacactgccacttactacaaatttggtaaaaactttgttaaagaatccaagtaacgtttttcctagtgcctagtgctgcagatgacatctgtaaaacaaaagctaacctccttttcttagcaattgcagtcatctgctctattcctaggagtccaggaggttaaagcttttcatggtactgagtgatttatatctttttttgttataaaagttggccacacgtagctttttcagtgttttaatgacagtctctaattttcttaactgcttgttagtcaaaattacattccagatgaaagcttttgcatacgggatttgattttcatttacttacagttcatctctttgaaacagtaaagattctaatgtgaaaatagtatgtgacttttataaatgacctttttacagagccattttatatcgagtagaatagctgtctgctatgggacattgtgttcagccaacgcagtggcagaaggagtgctcatgtgacagtatctcactatcttactcttgagtgtttgttgtgctgctgagtaagtgtctgtgtaagagcagcttcctgttgataacgtaccttaaagcacagctgccctaacaaatctggtgaggaggaacgtgttgctaaatttggaggccagtatttcgtgctgtgaaacctttgccaaatgaaggtctgttttttgtttctttgtaggcatatgttgttagtggttttaacactaattccttaaagaccacaaggaattgatctgcagaggtcctcggtgttgatagatctcttcttagtttgatgttactgctcatttatttgtgtatggatctgacttgagaggagctcttcaaaatacgtgttagagtgattcaattaaattgatctttcagttctgaaaggaaacgcttgtaattaaaatacaatttctctggtgaactggaaaaccaatttcatttccctggacaaaaatatgttgactatgaaactgcttgatcgttctgtactaccacctcttattttttaacaaacattgtgtaagtaagacttaactttagaagaatgatgtcaatcatggcattagcgttgaggcagcagaagtcttgtttccttggtgttgtgctagaggtaaggcctgttaaagtgtagtgtggctgaagaaaatttgccacttgaaatattcaacttgatattttttttattgggaaaactggattaatagcttttattactgtattttgtacactggtgggctgccaacatccaactgctgcttgcacaggtctcaacaaaaataactgcaaaaggagactctctggagagaaggaaggagctgctgcagtcagatgagggaagcaggttctgcatctctgcatcactccgccttctgctgaacgacctctggtacttaagattatgtccatgtagtggaactcttcatttggagttctttactgttcacttggagtgtttttgcttctttcacttaaggatttctgccttagatgctgcccttcaagtcttgcagaaagcaaactagttctattgagagtgttaaagcccacgttcttgtggaagacggtattgatgctgctcagcctaccagtattagtcttgtaacagctttgcttcatagctgtagctccttccctgctttgagctgtggcgatgaggaagcagctgcaggtgcttgaagaaagagtacacagaggatgtttgtcattctaggcttgtttgttgttttcttgtttccagtacagtgttttggcatgattatctgccatgtgctgtcctaggcccttgagatataggtaatgctaatacttggttaaacaaagacattgattatatccaaatctattctgcacaaatgctcgttttcatatttttcccaccttatctgtagagctgtatattccttagtcctccccctttacgatcagtgggaggtttggtgtgtctgtgttcagaaggccagtatattctgactacgatttgctgttacctgtcaccacgtgcttgtcttgtattttcagatctctcaagacggttcaaacaagatgaattaaataatgcagcctatgggagtctttgtagctgaaaggtctgagagtcagctttttccattgtgagctcctatttttcaggagttagtgagttggccataaaatctttggccaagagtttaaggtctttcataaagagagacttctgccgcagttttgctttcagtattgactagatggctgggatacagctcttgtaatcctgctcattgatggtaagctgaattaaagcatgaatttgcatggtaacccataaaatggacttgtaatgttcaaatattttttaatgaactgtaaatgctgatatttgatggttcaagtgtgtttctagaatcatgaatgctgttttgagctttcagaggaggcaataatgatgttgacacctttccatttctccaaaggagcatcttatgtatttgtaccaagattccatttttgtatctttaactataaaataagtagtctagaaacaatgttaaacaagtaaaggggatctgagtcaaacatgcaaaagcgagggatgctgacaactcctcatgtcactgtgcttgaaaggactttaagtcacactttctgatgcatgcaactagtaactgagaaatggagctgtaatgtgacatgagaattgaggctctttgcttttgctacgtgacccagacttggtgtgacttgtgcactgtgatctgtctgggttggcatcagtgctgcaggtggcaaaaggtgggagggattcatggccagtcttggaactcagcagttccgtgaacataccagtaaccagtacaacttccatatgctgtttagtctatgctagttcacattgcatgttcactttaaaccaaatcttttttgctaagcatggtgcttgtattggtataaataaaatgtttaattaaga

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