LOCUS       NM_001008442            2956 bp    mRNA    linear   VRT 19-SEP-2023
DEFINITION  Gallus gallus solute carrier family 25 member 15 (SLC25A15), mRNA;
            nuclear gene for mitochondrial product.
ACCESSION   NM_001008442 XM_417080
VERSION     NM_001008442.1
KEYWORDS    RefSeq.
SOURCE      Gallus gallus (chicken)
  ORGANISM  Gallus gallus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes;
            Phasianidae; Phasianinae; Gallus.
REFERENCE   1  (bases 1 to 2956)
  AUTHORS   Tang H, Finn RD and Thomas PD.
  TITLE     TreeGrafter: phylogenetic tree-based annotation of proteins with
            Gene Ontology terms and other annotations
  JOURNAL   Bioinformatics 35 (3), 518-520 (2019)
   PUBMED   30032202
REFERENCE   2  (bases 1 to 2956)
  AUTHORS   Caldwell RB, Kierzek AM, Arakawa H, Bezzubov Y, Zaim J, Fiedler P,
            Kutter S, Blagodatski A, Kostovska D, Koter M, Plachy J, Carninci
            P, Hayashizaki Y and Buerstedde JM.
  TITLE     Full-length cDNAs from chicken bursal lymphocytes to facilitate
            gene function analysis
  JOURNAL   Genome Biol 6 (1), R6 (2005)
   PUBMED   15642098
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AJ720668.1.
            
            On Dec 16, 2004 this sequence version replaced XM_417080.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AJ720668.1, SRR13267658.25742.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN02738224 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2956
                     /organism="Gallus gallus"
                     /mol_type="mRNA"
                     /db_xref="taxon:9031"
                     /chromosome="1"
                     /map="1"
                     /breed="Leghorn"
     gene            1..2956
                     /gene="SLC25A15"
                     /note="solute carrier family 25 member 15"
                     /db_xref="CGNC:50873"
                     /db_xref="GeneID:418886"
     exon            1..88
                     /gene="SLC25A15"
                     /inference="alignment:Splign:2.1.0"
     exon            89..196
                     /gene="SLC25A15"
                     /inference="alignment:Splign:2.1.0"
     exon            197..326
                     /gene="SLC25A15"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    266..268
                     /gene="SLC25A15"
                     /note="upstream in-frame stop codon"
     CDS             272..1177
                     /gene="SLC25A15"
                     /note="solute carrier family 25 (mitochondrial carrier;
                     ornithine transporter) member 15"
                     /codon_start=1
                     /product="mitochondrial ornithine transporter 1"
                     /protein_id="NP_001008442.1"
                     /db_xref="CGNC:50873"
                     /db_xref="GeneID:418886"
                     /translation="

MRINSALQAAIDLTAGAAGGTACVVTGQPFDTAKVKMQTFPDMYKGIVDCFVKTYKQVGFRGFYKGTTPALVANIAENSVLFMCYGFCQQIVRRIVGVDRKTKLSDLQNAAAGSFASAFATLVLCPTELVKCRLQAMHEMQLSGKIVQGQSTVWSVVKSVIQKDGPLGFYRGLSSTLLREVPGYFFFFGGYELSRTFFASGRSKDELGPIPLLLSGGFGGSCLWIAVYPVDCVKSRIQVLSMAGKQTGFMGTFVTVVRTEGVLALYSGLKPTMIRAFLANGALFLAYEYSRKLMMKQIDSY"

     misc_feature    284..553
                     /gene="SLC25A15"
                     /note="Mitochondrial carrier protein; Region: Mito_carr;
                     pfam00153"
                     /db_xref="CDD:395101"
     misc_feature    632..865
                     /gene="SLC25A15"
                     /note="Mitochondrial carrier protein; Region: Mito_carr;
                     pfam00153"
                     /db_xref="CDD:395101"
     misc_feature    884..1159
                     /gene="SLC25A15"
                     /note="Mitochondrial carrier protein; Region: Mito_carr;
                     pfam00153"
                     /db_xref="CDD:395101"
     exon            327..585
                     /gene="SLC25A15"
                     /inference="alignment:Splign:2.1.0"
     exon            586..723
                     /gene="SLC25A15"
                     /inference="alignment:Splign:2.1.0"
     exon            724..893
                     /gene="SLC25A15"
                     /inference="alignment:Splign:2.1.0"
     exon            894..1052
                     /gene="SLC25A15"
                     /inference="alignment:Splign:2.1.0"
     exon            1053..2941
                     /gene="SLC25A15"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

gctttccccggggccgcggggtgccgcgccgccttccccggccgcctatataggggcggcggcggcggcggggcggttgggcgctgcggtccgagctctgggtttgctgtagaagcggcagagcagtcgttaactcggcatgtccgcgagcagtttgtaatagaatcgtgtaatcacaaagaagacacgggagtaggaggaaaacatcctgacaccttccaggaaactggagactttttacactgcaataatcaataaacaagtgtgaagcatgaggatcaactctgctcttcaggctgctattgacctcacagcaggagctgcaggtgggacagcctgcgtggtgactggccagccctttgacacagcaaaggtgaagatgcagacgttccctgacatgtacaaaggaattgttgactgttttgtgaaaacctacaaacaagtgggatttcgaggcttctacaaggggaccacgcctgctctggtagccaacattgcggagaactctgttcttttcatgtgctatgggttttgccaacaaattgtgagaagaattgttggagtagacaggaaaacaaagctcagtgacctacagaatgctgccgcgggctccttcgcctctgcctttgccacgcttgttctgtgccccacagagctggtgaagtgccggctgcaggccatgcacgaaatgcagttgtcgggaaagatagtgcagggacagagtacagtttggtcagtagtgaagagcgtcatccaaaaggacggcccccttggcttttaccgtggcctgtcgagcactttgctgcgggaagtccccggctatttcttcttcttcggggggtatgagctgagccggacgttcttcgcctctgggagatcgaaagatgaattgggacccattcctttgctgctcagcggaggttttggaggcagctgtctgtggatcgctgtgtatcctgtggactgtgtcaaatctagaattcaggttctttcaatggctggaaagcaaacgggcttcatgggaacgtttgtaactgtcgtgagaaccgaaggtgtacttgccttgtattctggactaaagccaactatgatccgtgcattcctggccaatggggcactgtttcttgcctatgagtacagccggaaactgatgatgaaacagatagattcttactgattccttctagcaaacagaacaaccctttaaataaatgatcaaaacctgtaggactcatcacgatctgagagcagtaccagatcactgacctgattttaggaactcagttccagtttaggatttgtaatcttttaaattcaagtgatttttatggagaggtatatgtgcttcttgaattggacgggcaggactgtctccatcttgcagattctgcactgggtatgctgtgcatcataaatgtctcttcctgcctgtaatggtgctaaaaagacatactggtttttaatgttacaggcagaacaggctgtagtttgttaaaggcaaagcactgctttagagcctgtgctgtgactgctccatttcccattccttgctggcaatatctgattccatgtaattccagtcttgtctaatcttagcgagtgtggctgtcattttctagctcccttctaccctgtgattttccaggatcattgcagctggttcctgactcgcatactctgacacactgatggccttacagaagctagaagcattcaccccccacttttactgtcttatgacctagagctgagatagggttgcattggagataaaatatgaagttactggatgtaaggagtcaatgcagcatttataacaattgtttgctgcaggcggtgctgaaatattataaatagcactgaattaaactaacataggagggctgctggaaacagctgcttgttcaaagcgcggagttgtaacgtgcaagctcacagttaggtcaccttggtggagatgagtccgtgtgcttgaaggacaggaagctgaagaggaacaaagccagagccaacttcttgaagacagccgacaccgtgggcttcaatctattctgactggagtcctgccacatgtgccactcgctgcagctcttcagctgagtggaaaacatttggtgtcttgggccattcacatcaccctcagtcctggagggcacatctgctttctcctggcatttgcttaaatacgcaacttaaggccagttagtgttgcccaaattgagactgtagcacctctttttctagttgctcccttccttttctttaagaagcagcctactgccaagcctggaagaagacaaagcaaatctcagtacagtgcagctcataactcaaacctggagttgttgagagatactgcctatgtgatggtgtaacatacccaccctttggacacgggcaagccaccctcttgtctagcagcactttgacccatcacatagaagttagcagcttgttacagcaaatagaacatgccagtaagtgacagttctatgctacagcctgtgtcatagccccagaaagaggaaaaagctgtagacacagaaaaacatctcactgcctcttgtgatggagccagagcacactcaaaggggctactaatggaaggtggttactgcaggtccacagaccctttttgcttcttcagccttcaggagcagcacaaaccgctcccacaaaaggggcagttacaaacagtgcatggctgaagaggctgtagtgtgtattgcaccactttacctcgactcactggtacatgtggcagtaacactgcacaaagtcagctctttaaaaggagctcatggcaaaggtttgaataactcaggtacaagggtaggatttcaagagtcctaagcttcctccttttcaaagctgtttatccaagagaaataataccagctttcatgattgtacgcagttgtaataaaggtaacagaatccaaaaaaaaaaaaaaaa

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