2025-04-23 14:19:11, GGRNA.v2 : RefSeq release 229 (Mar, 2025)
LOCUS XR_011669897 2746 bp RNA linear VRT 18-FEB-2025 DEFINITION PREDICTED: Salvelinus alpinus ClpB family mitochondrial disaggregase (clpb), transcript variant X3, misc_RNA. ACCESSION XR_011669897 VERSION XR_011669897.1 DBLINK BioProject: PRJNA1211668 KEYWORDS RefSeq. SOURCE Salvelinus alpinus (Arctic char) ORGANISM Salvelinus alpinus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_092107) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_045679555.1-RS_2025_01 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 01/27/2025 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2746 /organism="Salvelinus alpinus" /mol_type="transcribed RNA" /db_xref="taxon:8036" /chromosome="22" gene 1..2746 /gene="clpb" /note="ClpB family mitochondrial disaggregase; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads" /db_xref="GeneID:139549508" misc_RNA 1..2746 /gene="clpb" /product="ClpB family mitochondrial disaggregase, transcript variant X3" /db_xref="GeneID:139549508" ORIGIN
tgtagccaacattaaaggttgatctgtaaagttatatttgaatggtgtatgtgatcaaatggttgaccctgggttatagatgtctccaacaaatatgttgttttcctatttcctaagctcccacattgtggccagagttcttcctcttctcctgggggattttatatggtggttgacaaccaactttaaggtgcatcaccgccaccaactggactggagtgtggaccagtgagaaggaaggtctaaattctactcaatattctcatctccctaaggaaacgaaatacaacaattaaatactgcatctcctgaagttttccccagcagttcactcaatgttggctagcaccagcccctataggctattcgtgcttgtattaggcctagtgactgctgactgctgcgacacaacacgtgtttgttgcgttatccagcctcggcagtgccacaggatctgaacgccatctggtggcgaatcatagcgaaggagaaagttattttgtttgttataaagcagaacaaaagtaaattttttcatatggggattgatttagatgaagttgtgtgtggaacattttaagactatgaataaatccagagttaaccttcataagaggtgctggagtagcctctgcgataccaggaagtggagccagttagtttctgtaggaaaaaaactattattcccatgatgcagttcatgttccagtgacaacccatgcttgggttgtttttgttctgtcgctgctgtcaaccattagcagataaataacggtctataggcggaataacggcagtagacttcaattaaaggcgttgtcgtttctagtaagtactatcatcaggcttaacgttgcacggttcgcgtgttttcccgcaatgttgtcttcggttccaccgcggatcttcatgcgaaggtcgcgcagcctttcgccgtgccgtgtgctccagacaagcacaaaggacgccgcgaggaaccacatcatcctcgataaagcggacgccaaccggaaccccatcgtttctacctcccgtgtctcccgtagaggaattctgagcgaggaggcgaaaggccagagtgtgagcctgaacatacagtatcaccatctggcccccaggtggctctctaacctccaggatcgcaggagctcctgggcctctctggcttccaagggacgcaacaacaaccagtactgggaacagagcgggggaaggaccgggggagagagcgggagcagccgcccgtacgcactggcctctgctggggtactgtccgctgcagccatggccttctgcctcaagaaggactctgatacgaaaggtgatgcacttctggaggctgcaaggaccaacagctcgcaagatgtggcaaggttgctgggtgagggggtggagcctaaccaccggcaccgtctgggctggacctctctcatggtggcagctatgaaccgccagcacagcgtggtgaaggttctgctggaggctggggctgatcctaacgcaggagacgacttcaacaacgtctatgacacatccagagagaagggcattcactcactggaagtgttggtttccagggaggatgaatttagtagcaggctgagtagcagggctggtttccgtggttgcacagccctacactacgcaacgctggccgacgacccacacgctgtacgcatgctgctggagaaaggtgccaaccccctgcagaccaatgccttaggacacacagccagagcctacgccaaggagggagagttacacacactactgctggagtgggagggcaagttccaggaagctcaagctaagagagaggcagaggagagaagacgtttccctctggagaaacgactgatggagcacatcatcggtcaggagggggccatcaacactgtggcttcagcgatcaggaggaaggagaatggctggtatgacgaagaacatcccctcgtcttcctcttcctcggctcctctggaatcggtaagactgagctggccaaacaggtggctcgttatatgcacaaggacctgaaaaagggattcatccgcgtggacatgtctgagttccaggagaagcacgaggtggctaaattcataggttctcctccaggttatgttggtcatgaagagggaggtcagctgactaaacagttgaaggcgtatcccaatgctgtggttctgtttgacgaggtggacaaggcccacccagacgtactgaccatcatgctacagctgttcgatgagggccgtcttacagatgggaaggggaagaccattgagtgtaaggacgccatcttcatcatgacctcgaacgtggccagtgatgacatcgctcagcatgcattgcagctccgccaggaggtccaggagctcagccgcaggaaactggtcgacaacctggacgatgttcaaaagagggatgatgtcaccatctccaggcagtttaaggacgctgtaattcgccctattctgaagcatctcgctgacaccacagattggttgagccactattctgaaggcccatttccggagggatgagtttctggggcggatcaatgagattgtctacttcctgccgttctgcccctctgaactgcagcagcttgtcagcaaagagctcaacttctgggccaagaaggcgaaacagaggcatgacatcactctgctgtgggaccgccctgttctggacctgctggctggaggttacaacctgcactacggagcccgttccatcaaacatgag
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]