2025-04-22 02:04:34, GGRNA.v2 : RefSeq release 229 (Mar, 2025)
LOCUS XR_006705287 2410 bp RNA linear MAM 17-DEC-2021 DEFINITION PREDICTED: Leopardus geoffroyi dicer 1, ribonuclease III (DICER1), transcript variant X6, misc_RNA. ACCESSION XR_006705287 VERSION XR_006705287.1 DBLINK BioProject: PRJNA786922 KEYWORDS RefSeq. SOURCE Leopardus geoffroyi (Geoffroy's cat) ORGANISM Leopardus geoffroyi Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Leopardus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_059337) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Leopardus geoffroyi Annotation Release 100 Annotation Version :: 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 9.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2410 /organism="Leopardus geoffroyi" /mol_type="transcribed RNA" /isolate="Oge1" /db_xref="taxon:46844" /chromosome="B3" /sex="male" /cell_type="Fibroblast" /tissue_type="Fibroblast" /dev_stage="adult" gene 1..2410 /gene="DICER1" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns" /db_xref="GeneID:123584267" misc_RNA 1..2410 /gene="DICER1" /product="dicer 1, ribonuclease III, transcript variant X6" /db_xref="GeneID:123584267" ORIGIN
cggcggcggcggcggcgccaggcggcaccgggaggcctgggctgtgacgcgcgcgccggagcggggtccgatggttctcgaaggcccgcggcgccccgtgctgcaggttacctagggtgtgaattaatacagacttggaaactgagagaacttagaatcagcattttgagagcagaagcttgggcatgctgtgattttccaataaactgctatcacaatgtcaaaatgcagctcggacaacagcaacacagagatctcaaacattaaaacgtaagctgcgctagagcaaaatgcagtgagagaagcactggatgaatgaaagccctgctttgcagcccctcagcatggcgggcctgcagctcgtgacccctgcctcctcaccaatgggccctttctttggactgccatggcaacaagaagcaatccatgataacatttatacgccaagaaaataccaggtggaactgctcgaagcagctctggatcataacaccatagtctgtttaaacactggctcagggaagacgtttattgccgtactactcacgaaagagctgtcctatcagatcaggggagacttcaacagaaacggaaaaaggacggtgttcttggtcaactctgcaaaccaggttgctccacaagtgtcagctgtcagaactcattcagatctcaaggttggggaatactcaagcctggaagtaaatgcagcttggacaaaagagaaatggaaccaagagtttactaagcaccaggttcttgttatgacctgctatgtcgccttgaacgttttgaaaaacggttacctatcgctgtcggacattaaccttttggtgtttgatgagtgtcatcttgcgatcctagaccacccctaccgagaaattatgaagctctgtgaaaactgtccatcgtgtcctcgtatcttggggctgactgcttccattttaaatgggaaatgcgatcccgaggaattggaagaaaagattcagaagctggagaaaatcctcaagagcaatgccgagaccgcaactgacctggtggtcttggacagatacacttctcaaccgtgtgagattgtggtggactgtgggccgttcacggaccgaagtggcctctatggcaggctgctgctggagctggaggaggcactgaactttatcaacgactgtaacatatctgtgcgttcgaaagagagagattcgacttcaatttctaagcagatactgtcagactgtcgtgccgtattggtggtcctgggcccctggtgtgcagataaggtcgctgggatgatggtccgggagctgcagaagtacatcaaacacgagcaagaggagctgcacaggaaatttctattgtttacagacaccttcctaaggaaaatccatgcactatgtgaagagcacttctctcctgcctcacttgacctgaaatttgtaactcctaaagtaataaaactgctcgaaatcttgcgcaagtacaaaccgtatgagcggcagcagttcgagagcgtcgagtggtataataacaggaatcaggataattacgtgtcctggagtgattctgaggatgatgacgaggacgaagagatcgaagaaaaagagaagccggagaccaatttcccgtctccgttcaccaacatcttatgcgggatcatctttgtggaaagaagatacacagcagttgtcttaaacagattgataaaggaagctggcaaacaagatccagagctggcttacatcagcagcaattttataactggacatggcattggaaagaatcagcctcgtaacaaacagatggaagcagaattcagaaaacaggaagaggtacttaggaaatttcgagcacatgagaccaacctgcttattgcgacaagcattgtggaagagggtgttgacataccaaaatgcaacttggtggttcgttttgatttacccacagagtatcgatcctatgttcaatctaagggacgagcaagggcaccgatctctaattacataatgttagcagatacagacaaaataaaaagttttgaagaagaccttaaaacatacaaagctattgaaaagatcttgagaaacaagtgttccaagtccgttgatgcgggtgagactgacgttgaacctgtcgtggatgatgacgatgtgttcccaccatacgtgttgaggcccgacgacggtggtccgcgagtcacgatcaacacggccattggacacatcaacagggtccgccaatgagctgtatacgattggccgaaagagttgtagcgctcatttgctgtgaaaaactgcacaaaattggtgaactggatgaccatttgatgccagttgggaaagagacggttaaatatgaagaagagcttgatttacatgacgaagaagagaccagcgttccaggaagaccaggttccaca
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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