2024-11-15 19:40:49, GGRNA.v2 : RefSeq release 226 (Sep, 2024)
LOCUS XR_002138460 3994 bp RNA linear MAM 22-DEC-2016 DEFINITION PREDICTED: Rhinolophus sinicus NRDE-2, necessary for RNA interference, domain containing (NRDE2), transcript variant X2, misc_RNA. ACCESSION XR_002138460 VERSION XR_002138460.1 DBLINK BioProject: PRJNA358073 KEYWORDS RefSeq. SOURCE Rhinolophus sinicus (Chinese rufous horseshoe bat) ORGANISM Rhinolophus sinicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Rhinolophoidea; Rhinolophidae; Rhinolophinae; Rhinolophus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_017738936.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rhinolophus sinicus Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3994 /organism="Rhinolophus sinicus" /mol_type="transcribed RNA" /isolate="Zhonghua_01" /db_xref="taxon:89399" /chromosome="Unknown" /sex="male" /tissue_type="muscle" gene 1..3994 /gene="NRDE2" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns" /db_xref="GeneID:109454342" misc_RNA 1..3994 /gene="NRDE2" /product="NRDE-2, necessary for RNA interference, domain containing, transcript variant X2" /db_xref="GeneID:109454342" ORIGIN
cactaccggcggccactcgccgccgccatttatgtggcggggaacggcggtgcggcctgtcatcatggcgctgtttccggcctttgctggcgttagtgaggctcccgatagcgggagctccaggaaagaattagactggctgagcaacccaagcttttgtgtgggaaccataacatctctgagccagcaaaccgaaggggccacagctcttgcttctgaagggtcaccactgacaaggagtcctctgaagtcagagccttcagatgaaagtgacactaacgaaaagctcaaactaacaagcagaaaaaagaagaaagagaaaaagaagaaaaggaaacatcaacaccacaagaaaaccaggagaaaacatgggcagtcaagtagcagtggctctgagctcgacactgattctgaaaaggaccagccttccagaagcagagacagtaaaaaggaatcagagaaagtgaatcaagaaaatgctgctgctgctgatactggacgttgctttatttggcttgaggacgttcaggctctgacaggagaaaccttcagaacagataagaaaccggatcctgcaaactgggagtataagtcgctctaccgaggagatatagcaagatacaagaggaaaggagactcctgccttggcattaaccctaagaagcagtgtatatcctgggaaggggcttccacagaaaagaagcgttcccacaagcacgtcgagcgctattttacgaagaagaatgtgggattgatgaaggttgacggagttgccatcagcagaaaaaccgaacctccctcctctgagccagtctcgtttatccccgtgacgggctccgacgatgtggttccttctgttacaacctggttgaacccgctggggatctatgatcagtccaccacgcagtggttacaaggacagggtccttcggagcaagagtcaaagcagccggactcacagccagacagagagaacgtgcttctcaaggccaaggtggaggagttcaacaggagggttcgggagaatccgcgggatattcagctgtggatggcgttcgtggctttccaggatgaggtcatgaaaagtccgggcctgtatgccatcgaggaaggggggcaggaaaagcggaagaggtccctgaagctcattctggagaagaagctggccatcctggagcgggccattgaaagcaaccagagcagcgtggatctgaaactcgccaagctgcagctctgcaccgagttctgggagccctccacgctggtcaaggagtggcagaaactgatattcctacatcccaacaacacagccctgtggcagaagtaccttttattttgccagagccaatttagcaccttttcagtatcaaaaattcacagtctttatggaaagtgcttgagtactttgtctgctgtgaaggatggcagcatcctgtcccaccctgagttgcctggcaccgaagaggccatgtttgcactctttcttcagcagtgccacttcctgcgccaggctggccactcggagaaggctgtctctctgttccaggccatggttgacttcaccttcttcaaacctgacagcgtgaaagatttgcctaccaaaggccaggtagaattctttgagcccttttgggacagtggagagccccgggccggggagaagggcgcccgaggctggagagcatggatgcaccagcaggagcggggcggctgggtggccgtcagtccagatgacgacaacgacgatgaccccgagggtgatgcacaggaaatcagagacaagacgctgcccaggtggcaggtctggcttgctgctgagcggtcccgagaccagaggcactggcggccgtggcgccctgataagaccaagaagcaaactgaggaagactgtgaggaccccgagaggcaggtgttgtttgatgatattggccaatccctaatccgactttccagccaagagcttcagtttcagctgattgcagcctttctgcagttcttgggtgtgccttctgggttcggccctccagcctcctgcctctatctggccatggatgagaacagcatcttcgataatggactttgtgatgaaaagccattgacttctctcaacctgtcatattctggagtcagctgtgttggccgcacggaccagttgggctgccggcgctggaccaggggtcacaaccgagagggcgaggaattcatccgtaacattttccaccttgtgatgcctttgttttcaggcaaggagaaatctcagctctacttctcctggttccagtacgagatggcaaaggtcatttggtgtctacacactaaaaacaagaagagattaaagtcacaaggaaagaattgcaaaaaactagccaagaatctccttaaggagccagaaaaccgtaataatttttgcctctggaaacagtatgcacatctggagtggttgcttggcaacacagaggacgcccggaaagtgttcgatacagcactcagcatggcagggagcaaggatcacgaactctgtgaactcagtctgctttacgcggaactggaggtggagctatggtcagacctcaggggcgcccccccagcccgagctgttcacgttttgaccagactgactgagaacggctcctatgggccctttaccgggccagtgttggccgttcacattctgaaagctcggaaggcttatgagcacgcactgcaggactgttggggtgagagccgcgtctccgatccagctgcccgtagccgccttaccagcttggccaaatgctttatgctcttccagtatctgactgtaggcatcgaggctgctgcgcgtgtgtacgagcaggtatttgcaaaactgaagggccgtgatgcccctgaaggccgcggcctggaggacagcgccagcccccagagtgtgggctgtgtcctcgaggccgtcacactgatgcacacgagcctgctcagattccactccagagtcagtgtctaccctctggctcctctgcgagaggcgctctcccaggctttaaagttgtacccggacaaccaggctctttggaagtcctatgtgcaggttcagagtaagtcccacgatgccagtaagaccaggagattcttcgatgccatcaccaggtctacgaaatccttggagccttggctgtttgcaattgaagctgagaaaatgaggaaaagactggtggaaacggttcagagggtagatggcagagaggtccacaccacaattcctgagactggcttgacacatcggatcaaagccctgtttgaaaatgcgatacggagtgacaacggcggccagtgccccttactatggaggatgtatttgaattttttggtttccttagggaataaagaaagaagtaaaggtgtgttctacaaagcgctgcagaattgtccttgggcaaaggtgttgtacatggacgctgtggactacttccccgatgagatgcaggtggtgctggacctgatgaccgagaaggaactccgagtgcgcctgcccctggaggagctggagcttctgcttgaggactagggaccaaggcggtcgcctgccgtgggagccaggatgagcgagacgggtgacacacgcgtgtgagcgtgttagcagacccctgctttttaagtttttctagatcatttgtgtctgggttagcagtctctcacctcttgcattttttggatgtgacacaaaagctatcattttacatattatatatgtgactgtgtatatatgtacataaacaagaattgggccaagtgataacctgttgtggttgctgtgtcctgctctccctctgcctagctagtgccagccccaccgtggtgaatggacctgccctgctggcatccttggtggtcctgccaagtcctttaggttttgcagataaggtctgctgctgttgcacgactctaccgccagctctggggcaaggcactgaagtctgcacgctgttatcacctagaagcttccctgactcccgat
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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