2024-11-15 16:35:44, GGRNA.v2 : RefSeq release 226 (Sep, 2024)
LOCUS XM_067641368 1387 bp mRNA linear PLN 04-SEP-2024 DEFINITION Cenococcum geophilum 1.58 uncharacterized protein (K441DRAFT_359405), mRNA. ACCESSION XM_067641368 VERSION XM_067641368.1 DBLINK BioProject: PRJNA1151040 BioSample: SAMN04110467 KEYWORDS RefSeq. SOURCE Cenococcum geophilum 1.58 ORGANISM Cenococcum geophilum 1.58 Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporomycetidae incertae sedis; Gloniaceae; Cenococcum. REFERENCE 1 (bases 1 to 1387) AUTHORS Peter,M., Kohler,A., Ohm,R.A., Kuo,A., Krutzmann,J., Morin,E., Arend,M., Barry,K.W., Binder,M., Choi,C., Clum,A., Copeland,A., Grisel,N., Haridas,S., Kipfer,T., LaButti,K., Lindquist,E., Lipzen,A., Maire,R., Meier,B., Mihaltcheva,S., Molinier,V., Murat,C., Poggeler,S., Quandt,C.A., Sperisen,C., Tritt,A., Tisserant,E., Crous,P.W., Henrissat,B., Nehls,U., Egli,S., Spatafora,J.W., Grigoriev,I.V. and Martin,F.M. CONSRTM DOE Joint Genome Institute TITLE Ectomycorrhizal ecology is imprinted in the genome of the dominant symbiotic fungus Cenococcum geophilum JOURNAL Nat Commun 7, 12662 (2016) PUBMED 27601008 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 1387) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (23-AUG-2024) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 1387) AUTHORS Kuo,A., Peter,M., Kohler,A., Ohm,R., Kruzmann,J., Morin,E., Arend,M., Barry,K.W., Binder,M., Choi,C., Clum,A., Copeland,A., Grisel,N., Haridas,S., Henrissat,B., Kipfer,T., Labutti,K., Lindquist,E., Lipzen,A., Maire,R., Meier,B., Mihaltcheva,S., Molinier,V., Murat,C., Nehls,U., Poggeler,S., Quandt,A., Sperisen,C., Tritt,A., Tisserant,E., Crous,P.W., Egli,S., Spatafora,J.W., Grigoriev,I.V., Martin,F.M., Nordberg,H.P., Cantor,M.N. and Hua,S.X. CONSRTM DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (01-OCT-2015) DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_027137646). ##Metadata-START## Organism Display Name :: Cenococcum geophilum 1.58 v2.0 GOLD Stamp ID :: Gp0006117 ##Metadata-END## FEATURES Location/Qualifiers source 1..1387 /organism="Cenococcum geophilum 1.58" /mol_type="mRNA" /strain="1.58" /db_xref="taxon:794803" /chromosome="Unknown" gene 1..1387 /locus_tag="K441DRAFT_359405" /db_xref="GeneID:93593712" CDS 57..1238 /locus_tag="K441DRAFT_359405" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_067496826.1" /db_xref="GeneID:93593712" /db_xref="JGIDB:Cenge3_359405" /translation="
MSISTPYASTVSSRKRRRMGDSPTQGLHEALHEALHKAPHKALRTEALHEGLHEALHEGLYEALHEALHEALHEALRTEALHEALHEALCTEALHEGLRRRALHEVYTKLCTKVYTKLCTKLCTKLYTKLYVRRLCMKLCMKLCVRRLCTKVCTKVCVRRLCTKVCTKVCVRRLCTKVCTKVCTKLYTKLYVRRLCMKLCTKLCVRRLCTKLCTKLRTKLCVRRLCTKLYTKLYTKLCTKLCTKLRMKLCTKLCTKPCMKFCTKLCTKLHVRRLCTKLYTKLCTKLCMKLCTKPRTKLCTKLYVWRLCTKPYTKLCTKLYTKPCTKSCTKSCTKLCTKLCTKLCTKLCTKLCTKLCVRRLCTKLCIRMLCTTALRTTVLRTTEALYKSFVQSF"
ORIGIN
cagctattatctcagaaataccgtcaaattgatccgcagaagcagctctataattgatgagtatatctactccgtacgcctccacggtatctagtagaaagcgccgccgaatgggcgattcgcctactcagggtctgcacgaagctctgcacgaagctttgcacaaagctccgcacaaggctctgcgtacggaggctctgcacgaaggtctacacgaagctctgcacgaaggtctatacgaagctctgcacgaagctctgcacgaagctctacacgaagctctacgtacggaggctctgcatgaagctctgcacgaagctctgtgtacggaggctctgcacgaaggtctgcgacggagggctctgcacgaggtctacacgaagctctgcacgaaggtctatacgaagctctgcacgaagctctgcacgaagctctacacgaagctctacgtacggaggctctgcatgaagctctgcatgaagctctgcgtgcggaggctctgcacgaaggtctgcacgaaggtctgcgtacggaggctctgcacgaaggtctgcacgaaggtctgcgtacggaggctgtgcacgaaggtctgcacgaaggtctgcacgaagctctacacgaagctctacgtacggaggctctgcatgaagctctgcacgaagctctgcgtacggaggctctgcacgaagctctgcacgaaactccgcacgaagctctgcgtacggagactttgcacgaagctctacacgaagctctacacgaagctctgtacgaagctctgcacgaagctccgcatgaagctctgcacgaagctctgcacgaagccctgcatgaagttctgcacgaagctctgcacgaagctccacgtacggaggctttgcacgaagctctacacgaagctctgcacgaagctctgcatgaagctctgcacgaagccccgcacgaagctctgcacgaagctctacgtatggaggctctgcacgaagccctacacgaagctctgcacgaagctctacacgaagccctgcacgaagtcctgcacgaagtcctgcacgaagctctgcacgaagctctgcacgaagctctgcacgaagctctgcacgaagctctgcacgaagctctgcgtacggaggctctgcacgaagctctgtatacggatgctctgcacgacggctctgcgtacgacggttctgcgtacgacggaggctctatataaaagctttgtgcagagcttttaaacacggagcctctgtacggcctacccaaacaataactgcctaaggttctttaaggtacctatcgtagatctatgcgggttttatgtatattaggtagcgtttgctagcgtttaataaaattatatagagcttacgctcttaacaacgcg
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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