2024-11-15 19:52:24, GGRNA.v2 : RefSeq release 226 (Sep, 2024)
LOCUS XM_066343988 1246 bp mRNA linear MAM 10-JUL-2024 DEFINITION PREDICTED: Saccopteryx leptura Meis homeobox 2 (MEIS2), transcript variant X6, mRNA. ACCESSION XM_066343988 VERSION XM_066343988.1 DBLINK BioProject: PRJNA1130902 KEYWORDS RefSeq. SOURCE Saccopteryx leptura (lesser sac-winged bat) ORGANISM Saccopteryx leptura Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Emballonuridae; Emballonurinae; Saccopteryx. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_089508) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_036850995.1-RS_2024_07 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 07/09/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1246 /organism="Saccopteryx leptura" /mol_type="mRNA" /isolate="mSacLep1" /db_xref="taxon:249018" /chromosome="6" /sex="male" /tissue_type="liver" /dev_stage="adult" /geo_loc_name="Panama: Gamboa Approx" /lat_lon="9.07091 N 79.42076 W" /collection_date="2019-03-18" /collected_by="Alvarez van Tussenbroek" gene 1..1246 /gene="MEIS2" /note="Meis homeobox 2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:136377335" CDS 128..1069 /gene="MEIS2" /codon_start=1 /product="homeobox protein Meis2 isoform X6" /protein_id="XP_066200085.1" /db_xref="GeneID:136377335" /translation="
MALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPASWRDHDDATSTHSAGTPGPSSGGHASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAGFLLDPSVSQGAAYSPEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMDGQWHYM"
misc_feature 191..445 /gene="MEIS2" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" misc_feature order(707..709,836..838,845..850,857..859) /gene="MEIS2" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 746..862 /gene="MEIS2" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" ORIGIN
ctgaaccacgggccgccactccacgccacgcagcactacggcgcgcacgccccacaccccaatgtcatgcccgccagtatgggatccgctgtcaacgacgccttgaagcgggacaaggacgcgatctatggctctggtctttgagaagtgcgagctggcgacctgcactccccgggaacccggagtggccggcggagacgtctgctcctccgactccttcaacgaggacatcgcggtcttcgccaagcaggttcgcgccgaaaagccacttttttcctcaaatccagagctggacaatttgatgatacaagcaatacaagtactaaggtttcatcttttggagttagaaaaggtccacgaactgtgcgataacttctgccaccggtacattagctgtttgaaggggaaaatgcccattgaccttgtcattgatgaaagagacggcagctccaagtcagatcacgaagaactttcaggctcctccacaaatcttgctgatcataatcctgcatcttggcgagatcatgatgacgcaacctctacccactcagcaggcaccccagggccctccagtgggggtcatgcttcccagagtggagacaacagcagtgagcaaggggatggtttagacaacagtgtagcttcacctggcacaggtgacgatgatgatccagacaaggacaaaaaacgccagaagaaaagaggcattttccccaaagtagcaacaaatatcatgagagcatggctcttccagcatctcacacatccatacccttccgaggagcagaagaaacagttagcgcaagacacaggacttacaattctccaagtaaacaactggtttattaatgccagaagaagaatagtacagccaatgattgaccagtcaaaccgagcaggttttcttcttgatccttcagtgagccaaggagcagcatatagtccagaaggtcagcccatggggagctttgtgctggatggtcagcaacacatgggaatccggcctgcaggacctatgagtggaatgggcatgaatatgggcatggatgggcagtggcactacatgtaaccttcaccatgtaaagcaatcgcaaagccagggggaagtttgcagagcatgccaggggactacgtttctcagggtggtcctatgggaatgagtatggcacagccgagttacactcctccccaaatgaccccacaccctactcaattaagacatggacccccaatgcattcatatttg
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]