2025-04-23 14:47:32, GGRNA.v2 : RefSeq release 229 (Mar, 2025)
LOCUS XM_065943964 6855 bp mRNA linear MAM 22-JUN-2024 DEFINITION PREDICTED: Muntiacus reevesi ClpB family mitochondrial disaggregase (CLPB), mRNA. ACCESSION XM_065943964 VERSION XM_065943964.1 DBLINK BioProject: PRJNA1126686 KEYWORDS RefSeq. SOURCE Muntiacus reevesi (Reeves' muntjac) ORGANISM Muntiacus reevesi Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Muntiacinae; Muntiacus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_089257) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963930625.1-RS_2024_06 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 06/21/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6855 /organism="Muntiacus reevesi" /mol_type="mRNA" /db_xref="taxon:9886" /chromosome="9" gene 1..6855 /gene="CLPB" /note="ClpB family mitochondrial disaggregase; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:136174112" CDS 59..2092 /gene="CLPB" /codon_start=1 /product="mitochondrial disaggregase" /protein_id="XP_065800036.1" /db_xref="GeneID:136174112" /translation="
MLGSLVSKRTAPAPRLLLQLLRSPSLRSHESATGESVTTGGRGEPQWLRAAVGGRHGTSPALLTGGGAATGGRQRGRTETPCLAAATWGRLPSPEDTLPGQDSWNGVLSRAGLGVWALATALVVHCYSKSPSSKDAALMEAARANNVQEVSRLLSEGADVNARHKLGWTALMVAAINRNNSVVQVLLAAGADPNLGDDFSSVYKTAKEQGIHSLEVLVTREDDFNNRLNNRASFKGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSETKYQEKQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMSRNRIAENLGDVQISDKITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVEGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITVEDSDKQLLKSPELPSPQAERRPPKLRLEIIDKDSKTHKLDIQAPLHPEKVCHTL"
polyA_site 6855 /gene="CLPB" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN
tgttggaagtggtcagcacaggggccggcaccagggggttatcgaagcagctgtcacgatgctggggtccctggtgtcgaagagaacagcgccggcgccgcggctccttctccagctgcttaggtccccatcgctccggagccacgaaagtgccaccggcgagagtgtgaccaccgggggccgcggggagcctcagtggctgagggctgccgtcggggggcgccatggaacgtcgccggccctactcaccggaggaggggcagccactggagggcgccagagaggacgtaccgagaccccctgccttgcagctgccacgtggggacgccttcccagccccgaagatacactgcctgggcaggacagctggaatggagtcctcagcagagccggattgggcgtgtgggccctggccacggcgctggtggttcactgttacagcaagagcccgtccagcaaggatgcagccctgatggaagctgctcgagccaacaatgtccaagaagtcagcagactattgtcggaaggtgcagatgtcaatgcaaggcacaaacttggctggacagcactgatggtggcagccatcaaccgaaacaacagtgttgtgcaggtcctgcttgcggctggtgctgacccaaacctcggggacgactttagcagtgtatacaagaccgccaaggaacagggaatccattctttagaagtcctggtcacccgagaggatgacttcaacaaccggctgaacaaccgtgccagcttcaagggttgcacagccctgcactatgctgtcctcgctgatgactaccggaccgtcaaggagctgcttgatggaggagccaaccccttgcagaggaatgaaatgggacacacacccttggattatgctcgagaaggggaggtgatgaagcttttaaggacttctgagaccaagtaccaagagaagcagcggaagcgggaggccgaggagcggcgccgctttcccctggagcagcggctgaaggagcacatcattggccaggagagcgccatcgccaccgtgggtgcagcgatccggaggaaggagaatggctggtacgacgaagaacaccccctggtcttcctcttcttgggatcatctggaataggaaaaacagaactggccaagcagacagccaaatatatgcacaaagatgccaaaaagggtttcatcaggctagacatgtctgagttccaggagcggcatgaggtggccaagttcatcgggtccccaccaggctacattggccacgaggagggtggccagctgaccaagaagctgaagcagtgccccaatgccgtggtgctctttgatgaggtagacaaagcccacccagatgtgctcaccatcatgctgcagctgtttgatgagggccggctgacagatggaaaaggcaagaccatcgactgcaaggacgccatcttcatcatgacctcgaacgtggccagcgacgagatagcacagcatgcactgcagctgaggcaggaagctttggagatgagccgtaaccggatcgccgagaaccttggggacgtccagatcagtgacaagatcaccatctcaaagaacttcaaggaaaacgtgattcgccccatcctaaaagctcacttccggagagatgagtttctgggacgaatcaatgagatcgtctacttcctccccttctgccactcggagctcatccaactcgtcaacaaggagttgaatttctgggccaagagagccaagcaaaggcacaacatcacactgctctgggaccgcgaggtggcggacgtgttggtcgaaggctacaacgtgcactatggcgcccgctccatcaagcatgaggtggagcgccgtgtggtgaaccagctggcggctgcctatgagcaggacctgctgccggggggctgcaccctgcgcatcactgtggaggactcggataagcagctgctcaagagtcctgaactgccgtcaccccaggccgagaggcgtccccccaagctgcggctggagatcattgataaggacagcaagacccacaaattggacatccaggcaccactccaccctgagaaggtgtgccacaccctctagcgtctatctacctgcccatacatgccctcaacacctaataaagcccccttggctgtggcatggtgaccgacctaccttcccctcctgcttctcacccctctccatctagcctaaggcctgttacctcctcacagcccctggaagatgccttctcagccccaccctcgccccttcgttgtgggccccacgtgtgctctcaggtctctgggaagggagctgctcctctgtccgctttacggcaagaagaagagggagatccctcatctctgtccttcagcgtatcctcatgtcccagagcctctggaactttatcatgttttctggaaactcagaagtatggcagctgagaacagatctggctggaagaagacagggaccaggctgtgacctgctaccctctgctggctctcatgctactgagtccccagaatgtctccacagggagcagagaagtcagaggcccagacacagagcttctgcatttaagccattgcttcctctttcccatgccctagaattccaaggggaagggactctcggaacccttcccccttccactgccgtgtcatggctactattcctccctgccccacgttcaggggtcagaccagaccacgtctctccagccttagaactaggccagcatagggcatctttaggaagaaggctgggtcctacccaaccctacacagggcctggacagaagcaccaaatgaccaagcaagcttaactctgcagggcctcctgcaggagaccaacaacatagacagtgcagaactgtacggggagggatcctggggtctggctgtacgcagatggccatggagtctgcctcagccccatgtcctcagtaccatggtcctggctaagtgaacatgggatggacagctgcctcatgcagtctgcacattagtcactaaacagagggactgcacaccatcccccaaggctctccacacaccaggcgtgttcagccccagcttaattagcagggcacagcaaggcttggtgcatacatccttgggaaccatctgcagtggccaccattgaggaccatgccatcagcctcccctgaagggtcactttggaaaccctcctttggagtcagaaagtctcttccaggaagcagaaaatggggacaggaatcacagtccctcgggtgacggaggaatgtcgtgacacggcaggtggggggcagccggaagctggaacttgggctccagcagatgctgcagcaggcaccatccagcccctcaaggagctgtctgccgctttgtacctcagcgactgccactctttgtttatttattagcagcagttttttttttttaacttcttgttctgaaataattttagacttaccggaaattaccacaatagtagagttccatgcacccttcaccaacttcaccaaccatctgttaaaaattattaaattataattattaaaaccagaaaattaacatgacatggtactactagctaatctctaggcattcagattttgccattttccccactgatgtccttttcctggtccagaatccagtcgaggatcccgtgttccatcttgttgtgtttcctttatctccttcaacctgtgacagttcctccatccttctttgccttttatgaccttgacacttttgaaacctccaggtcagttaaatttgtagaatgtcccttaatttgggtgtctgctgttttcgcatgcttagattgagggtcaccattttgggtaaaactagccctcaagtgatgctgtgcccatccttataacctagagcaggtgatacatgctgaggttgtgtataccagtttctccactgtaagattactaattttccctttgaaatgaataagaatctcatggaaagatagaaactgtacagatgtcttatttatccatagaattttgcccgttgattttagcatccatcatgtaaatgtaaacacgttagtcactcagtcgtgtccaactctgtgactgtagcccgccaggctcctatgtccttgggattctccaagcaagaatactggagtgggttgccatttccttctccaagggatcttcccaaccggctcttgcttttaacaaacattaatactatatttgcctaatgatgacattgttttcttattccatctatatgtattaattggtattcttctgtaagaaacagctgtctcttttctcccatttatttattcaataatttacctataagtaaaactaatgaatatttgttttagtctatgggttgtagcctatcagtaatactagtaaagtttatttcattgctcatatggcctagatttggccattgggagctcttaagttggctcctgtgttgtttcagtgttgccccatcatttttttagtattaccctattttctggcaccacaaggtgttccaaggttacttacacttttcttgtcccagccctgacttcagccatttctctaagcaattcctgattcctcttatttgagaatggtacttagaaactaaggtggtatattcagtgcttctggagtgtcattgcttctaggccttttcagcacacaaagctaggaaataaatatatgtgtatatgttaacacatgtatcacacacaactgaacttattactctctctgtccatctgtgtattattaaaaaccatgagtccatgttgatgcctacagttctaacccaataccacagggcctgtgacttgccattattattagcactttactattcattctctgcttcttcctctcctgctatctctgtttcttctctcattctgttttctgttcagactcccatagaggctctaattaagtcagccagtgaccatcctttatggagcactcctgttggttaaagttcttatgcccgactgtcagtctcttggtttagtcagctgtggccaggaccagcagacatgtaactgaaaaccagatagcttttatacaggaaaacccaatgccacctttctgagaagagaataagggacagagtagaccctccgattctgagaaccttgaggatcacttctagagactcagtcagaccttgtaggtgatgttggacccctgccttatactttcatagcatcctccacagtattcagctcagttgtgttacttgttctgtgtttgcctttgtcattagagtgtaagatccagaagggcagatacccaatcctactcactgtcctgttcatagaagttggcacagagcaatcacatgatggctgctacaggtgtttggatggatgggtgggccctggagcaagcacagatcttcacagtgaggcccaggacacaacagtatcctatgttcatggagcgaacatttgtcatgtgcttgtggccaggcagcagaacttgagtggatagggcaaagtaagaccccagataccttactatgtatctagaaatacatgaggctggacttggaagtgaaatatcttcattgttcaaaaggaaaaattcaaaggtacatagtgattattttaggaatttaggaaaaaaaaaaaattaaaccataggagaaaagataaaacctgatgttaagtaggaatgccaaaaaaaaaaaaaggataagtagaaaatgattctttttgaaaacaccaataaaatagataaaatcttctcagcctgataaaggggaaaagtggagggggacgagatcagacataatcacatatatggaagagttttaaataaatttaggataagtctgtagccacaattttaaaaacagcagatagatcatttcctagaaaatactgacccaagatatagtttgaataagccaattaattaccaaaagaacccgataaactgccaaaaaagaatgccatagctagcgtaatctcatctatgactataggtgcaaaaattccagataaaattaagttgaactttacaacatgattacataaggcttatttcagcagtacaagcttctatatcaggaaatttactaatacaatccaatatattaatctaaagaacatgaatattatttaaatgtagattaacattttcttattttgataatatttcttatgaagatatccttgtttttagaaaatataacattgaaatatttaaagataaagacaattggcaagtgtttcaagaaactaaattatacacatacacatgcacatatgtatgtatacaagtgtgtgcgataaattgttcagtcgtttccaactctttggaaacgactatagcctgccaggctcctctgtccatggaattttccaggcacgaatactagaatgggttgccattcccttcaccgggggatcttcctgatccaaggatcaaacctgagtctcctgcatgggcagccagattctttaccacagagccacctacactcataaaaaaattacagaatgattaaacacaagtcttgtcattgaggaaatctgagtgaagggtatacaggaattctttgtattgtttctgcaacttttctgtaagtctaaaattatttcagaatgaaatttttttaatgaaaaacattttatcaatatgtactgaaaaagcatttgacaaaattttacagctttaagtatgatttgataaacctccaagtaaaaggaaaagaaactgttcatcgaaaaccaatagtaaagtctgaaataagagtcaacatttgaaaactgatgtgaaaattcagttgaaaataattaagcaagaaaagtgaataattggtatatgtattggaaaataataaattgttttgctgata
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]