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2025-04-23 14:47:32, GGRNA.v2 : RefSeq release 229 (Mar, 2025)

LOCUS       XM_065943964            6855 bp    mRNA    linear   MAM 22-JUN-2024
DEFINITION  PREDICTED: Muntiacus reevesi ClpB family mitochondrial disaggregase
            (CLPB), mRNA.
ACCESSION   XM_065943964
VERSION     XM_065943964.1
DBLINK      BioProject: PRJNA1126686
KEYWORDS    RefSeq.
SOURCE      Muntiacus reevesi (Reeves' muntjac)
  ORGANISM  Muntiacus reevesi
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Muntiacinae; Muntiacus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_089257) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963930625.1-RS_2024_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/21/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6855
                     /organism="Muntiacus reevesi"
                     /mol_type="mRNA"
                     /db_xref="taxon:9886"
                     /chromosome="9"
     gene            1..6855
                     /gene="CLPB"
                     /note="ClpB family mitochondrial disaggregase; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:136174112"
     CDS             59..2092
                     /gene="CLPB"
                     /codon_start=1
                     /product="mitochondrial disaggregase"
                     /protein_id="XP_065800036.1"
                     /db_xref="GeneID:136174112"
                     /translation="
MLGSLVSKRTAPAPRLLLQLLRSPSLRSHESATGESVTTGGRGEPQWLRAAVGGRHGTSPALLTGGGAATGGRQRGRTETPCLAAATWGRLPSPEDTLPGQDSWNGVLSRAGLGVWALATALVVHCYSKSPSSKDAALMEAARANNVQEVSRLLSEGADVNARHKLGWTALMVAAINRNNSVVQVLLAAGADPNLGDDFSSVYKTAKEQGIHSLEVLVTREDDFNNRLNNRASFKGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSETKYQEKQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMSRNRIAENLGDVQISDKITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVEGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITVEDSDKQLLKSPELPSPQAERRPPKLRLEIIDKDSKTHKLDIQAPLHPEKVCHTL"
     polyA_site      6855
                     /gene="CLPB"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
tgttggaagtggtcagcacaggggccggcaccagggggttatcgaagcagctgtcacgatgctggggtccctggtgtcgaagagaacagcgccggcgccgcggctccttctccagctgcttaggtccccatcgctccggagccacgaaagtgccaccggcgagagtgtgaccaccgggggccgcggggagcctcagtggctgagggctgccgtcggggggcgccatggaacgtcgccggccctactcaccggaggaggggcagccactggagggcgccagagaggacgtaccgagaccccctgccttgcagctgccacgtggggacgccttcccagccccgaagatacactgcctgggcaggacagctggaatggagtcctcagcagagccggattgggcgtgtgggccctggccacggcgctggtggttcactgttacagcaagagcccgtccagcaaggatgcagccctgatggaagctgctcgagccaacaatgtccaagaagtcagcagactattgtcggaaggtgcagatgtcaatgcaaggcacaaacttggctggacagcactgatggtggcagccatcaaccgaaacaacagtgttgtgcaggtcctgcttgcggctggtgctgacccaaacctcggggacgactttagcagtgtatacaagaccgccaaggaacagggaatccattctttagaagtcctggtcacccgagaggatgacttcaacaaccggctgaacaaccgtgccagcttcaagggttgcacagccctgcactatgctgtcctcgctgatgactaccggaccgtcaaggagctgcttgatggaggagccaaccccttgcagaggaatgaaatgggacacacacccttggattatgctcgagaaggggaggtgatgaagcttttaaggacttctgagaccaagtaccaagagaagcagcggaagcgggaggccgaggagcggcgccgctttcccctggagcagcggctgaaggagcacatcattggccaggagagcgccatcgccaccgtgggtgcagcgatccggaggaaggagaatggctggtacgacgaagaacaccccctggtcttcctcttcttgggatcatctggaataggaaaaacagaactggccaagcagacagccaaatatatgcacaaagatgccaaaaagggtttcatcaggctagacatgtctgagttccaggagcggcatgaggtggccaagttcatcgggtccccaccaggctacattggccacgaggagggtggccagctgaccaagaagctgaagcagtgccccaatgccgtggtgctctttgatgaggtagacaaagcccacccagatgtgctcaccatcatgctgcagctgtttgatgagggccggctgacagatggaaaaggcaagaccatcgactgcaaggacgccatcttcatcatgacctcgaacgtggccagcgacgagatagcacagcatgcactgcagctgaggcaggaagctttggagatgagccgtaaccggatcgccgagaaccttggggacgtccagatcagtgacaagatcaccatctcaaagaacttcaaggaaaacgtgattcgccccatcctaaaagctcacttccggagagatgagtttctgggacgaatcaatgagatcgtctacttcctccccttctgccactcggagctcatccaactcgtcaacaaggagttgaatttctgggccaagagagccaagcaaaggcacaacatcacactgctctgggaccgcgaggtggcggacgtgttggtcgaaggctacaacgtgcactatggcgcccgctccatcaagcatgaggtggagcgccgtgtggtgaaccagctggcggctgcctatgagcaggacctgctgccggggggctgcaccctgcgcatcactgtggaggactcggataagcagctgctcaagagtcctgaactgccgtcaccccaggccgagaggcgtccccccaagctgcggctggagatcattgataaggacagcaagacccacaaattggacatccaggcaccactccaccctgagaaggtgtgccacaccctctagcgtctatctacctgcccatacatgccctcaacacctaataaagcccccttggctgtggcatggtgaccgacctaccttcccctcctgcttctcacccctctccatctagcctaaggcctgttacctcctcacagcccctggaagatgccttctcagccccaccctcgccccttcgttgtgggccccacgtgtgctctcaggtctctgggaagggagctgctcctctgtccgctttacggcaagaagaagagggagatccctcatctctgtccttcagcgtatcctcatgtcccagagcctctggaactttatcatgttttctggaaactcagaagtatggcagctgagaacagatctggctggaagaagacagggaccaggctgtgacctgctaccctctgctggctctcatgctactgagtccccagaatgtctccacagggagcagagaagtcagaggcccagacacagagcttctgcatttaagccattgcttcctctttcccatgccctagaattccaaggggaagggactctcggaacccttcccccttccactgccgtgtcatggctactattcctccctgccccacgttcaggggtcagaccagaccacgtctctccagccttagaactaggccagcatagggcatctttaggaagaaggctgggtcctacccaaccctacacagggcctggacagaagcaccaaatgaccaagcaagcttaactctgcagggcctcctgcaggagaccaacaacatagacagtgcagaactgtacggggagggatcctggggtctggctgtacgcagatggccatggagtctgcctcagccccatgtcctcagtaccatggtcctggctaagtgaacatgggatggacagctgcctcatgcagtctgcacattagtcactaaacagagggactgcacaccatcccccaaggctctccacacaccaggcgtgttcagccccagcttaattagcagggcacagcaaggcttggtgcatacatccttgggaaccatctgcagtggccaccattgaggaccatgccatcagcctcccctgaagggtcactttggaaaccctcctttggagtcagaaagtctcttccaggaagcagaaaatggggacaggaatcacagtccctcgggtgacggaggaatgtcgtgacacggcaggtggggggcagccggaagctggaacttgggctccagcagatgctgcagcaggcaccatccagcccctcaaggagctgtctgccgctttgtacctcagcgactgccactctttgtttatttattagcagcagttttttttttttaacttcttgttctgaaataattttagacttaccggaaattaccacaatagtagagttccatgcacccttcaccaacttcaccaaccatctgttaaaaattattaaattataattattaaaaccagaaaattaacatgacatggtactactagctaatctctaggcattcagattttgccattttccccactgatgtccttttcctggtccagaatccagtcgaggatcccgtgttccatcttgttgtgtttcctttatctccttcaacctgtgacagttcctccatccttctttgccttttatgaccttgacacttttgaaacctccaggtcagttaaatttgtagaatgtcccttaatttgggtgtctgctgttttcgcatgcttagattgagggtcaccattttgggtaaaactagccctcaagtgatgctgtgcccatccttataacctagagcaggtgatacatgctgaggttgtgtataccagtttctccactgtaagattactaattttccctttgaaatgaataagaatctcatggaaagatagaaactgtacagatgtcttatttatccatagaattttgcccgttgattttagcatccatcatgtaaatgtaaacacgttagtcactcagtcgtgtccaactctgtgactgtagcccgccaggctcctatgtccttgggattctccaagcaagaatactggagtgggttgccatttccttctccaagggatcttcccaaccggctcttgcttttaacaaacattaatactatatttgcctaatgatgacattgttttcttattccatctatatgtattaattggtattcttctgtaagaaacagctgtctcttttctcccatttatttattcaataatttacctataagtaaaactaatgaatatttgttttagtctatgggttgtagcctatcagtaatactagtaaagtttatttcattgctcatatggcctagatttggccattgggagctcttaagttggctcctgtgttgtttcagtgttgccccatcatttttttagtattaccctattttctggcaccacaaggtgttccaaggttacttacacttttcttgtcccagccctgacttcagccatttctctaagcaattcctgattcctcttatttgagaatggtacttagaaactaaggtggtatattcagtgcttctggagtgtcattgcttctaggccttttcagcacacaaagctaggaaataaatatatgtgtatatgttaacacatgtatcacacacaactgaacttattactctctctgtccatctgtgtattattaaaaaccatgagtccatgttgatgcctacagttctaacccaataccacagggcctgtgacttgccattattattagcactttactattcattctctgcttcttcctctcctgctatctctgtttcttctctcattctgttttctgttcagactcccatagaggctctaattaagtcagccagtgaccatcctttatggagcactcctgttggttaaagttcttatgcccgactgtcagtctcttggtttagtcagctgtggccaggaccagcagacatgtaactgaaaaccagatagcttttatacaggaaaacccaatgccacctttctgagaagagaataagggacagagtagaccctccgattctgagaaccttgaggatcacttctagagactcagtcagaccttgtaggtgatgttggacccctgccttatactttcatagcatcctccacagtattcagctcagttgtgttacttgttctgtgtttgcctttgtcattagagtgtaagatccagaagggcagatacccaatcctactcactgtcctgttcatagaagttggcacagagcaatcacatgatggctgctacaggtgtttggatggatgggtgggccctggagcaagcacagatcttcacagtgaggcccaggacacaacagtatcctatgttcatggagcgaacatttgtcatgtgcttgtggccaggcagcagaacttgagtggatagggcaaagtaagaccccagataccttactatgtatctagaaatacatgaggctggacttggaagtgaaatatcttcattgttcaaaaggaaaaattcaaaggtacatagtgattattttaggaatttaggaaaaaaaaaaaattaaaccataggagaaaagataaaacctgatgttaagtaggaatgccaaaaaaaaaaaaaggataagtagaaaatgattctttttgaaaacaccaataaaatagataaaatcttctcagcctgataaaggggaaaagtggagggggacgagatcagacataatcacatatatggaagagttttaaataaatttaggataagtctgtagccacaattttaaaaacagcagatagatcatttcctagaaaatactgacccaagatatagtttgaataagccaattaattaccaaaagaacccgataaactgccaaaaaagaatgccatagctagcgtaatctcatctatgactataggtgcaaaaattccagataaaattaagttgaactttacaacatgattacataaggcttatttcagcagtacaagcttctatatcaggaaatttactaatacaatccaatatattaatctaaagaacatgaatattatttaaatgtagattaacattttcttattttgataatatttcttatgaagatatccttgtttttagaaaatataacattgaaatatttaaagataaagacaattggcaagtgtttcaagaaactaaattatacacatacacatgcacatatgtatgtatacaagtgtgtgcgataaattgttcagtcgtttccaactctttggaaacgactatagcctgccaggctcctctgtccatggaattttccaggcacgaatactagaatgggttgccattcccttcaccgggggatcttcctgatccaaggatcaaacctgagtctcctgcatgggcagccagattctttaccacagagccacctacactcataaaaaaattacagaatgattaaacacaagtcttgtcattgaggaaatctgagtgaagggtatacaggaattctttgtattgtttctgcaacttttctgtaagtctaaaattatttcagaatgaaatttttttaatgaaaaacattttatcaatatgtactgaaaaagcatttgacaaaattttacagctttaagtatgatttgataaacctccaagtaaaaggaaaagaaactgttcatcgaaaaccaatagtaaagtctgaaataagagtcaacatttgaaaactgatgtgaaaattcagttgaaaataattaagcaagaaaagtgaataattggtatatgtattggaaaataataaattgttttgctgata
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]