2024-11-15 16:46:52, GGRNA.v2 : RefSeq release 226 (Sep, 2024)
LOCUS XM_064984562 1158 bp mRNA linear VRT 03-MAY-2024 DEFINITION PREDICTED: Oncorhynchus masou masou putative proline-rich protein 21 (LOC135552747), mRNA. ACCESSION XM_064984562 VERSION XM_064984562.1 DBLINK BioProject: PRJNA1103205 KEYWORDS RefSeq; includes ab initio. SOURCE Oncorhynchus masou masou (cherry salmon) ORGANISM Oncorhynchus masou masou Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_088213) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_036934945.1-RS_2024_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.2 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/24/2024 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 100% of CDS bases ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..1158 /organism="Oncorhynchus masou masou" /mol_type="mRNA" /isolate="Uvic2021" /isolation_source="hatchery" /sub_species="masou" /db_xref="taxon:90313" /chromosome="2" /sex="pooled male and female" /tissue_type="Heart, liver, sperm, and fin" /dev_stage="Mature" /geo_loc_name="Japan: Hokkaido" /collection_date="2020-10-09" /collected_by="Takafumi Fujimoto" gene 1..1158 /gene="LOC135552747" /note="putative proline-rich protein 21; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:135552747" CDS 1..1158 /gene="LOC135552747" /codon_start=1 /product="putative proline-rich protein 21" /protein_id="XP_064840634.1" /db_xref="GeneID:135552747" /translation="
METQPCLMSSENKDMETQPCLMSSENKDMETQPCLMSSEIKDMETQPCLMSSENKDMETQPCLMSSENKDIETQPCLMSFENKDMETQPCLMSSEIKDMETQPCLMSSENKDMETQPCLMSSENKDMETQPCLMSSENMDMEKQPCLMSSENKDMETQPCLMSSENKDMETQPCLMSSEIKDMETQPCLMSSENKDMETQPCLMSSENKDMETQPCLMSSENKDMETQPCLMSSEIKDMETQPCLMSSENKDMEKQPCLMSSENKDMETQHCLMSSENKDMETQPCLMSSEIKDMETQPCLMSSENKDMETQPCFMSSENKDMETQPCLMSFENKDMETQPCLMSSENKDMETQPCLMSSENKDMETQPCLMTQPPRTWRHNPVS"
ORIGIN
atggagacacaaccctgtctcatgagctctgaaaacaaggacatggagacacaaccctgtctcatgagctctgaaaacaaggacatggagacacaaccctgtctcatgagctctgaaatcaaggacatggagacacaaccctgtctcatgagctctgaaaacaaggacatggagacacaaccctgtctcatgagctctgaaaacaaggacatagagacacaaccctgtctcatgagctttgaaaacaaggacatggagacacaaccctgtctcatgagctctgaaatcaaggacatggagacacaaccctgtctcatgagctctgaaaacaaggacatggagacacaaccctgtctcatgagctctgaaaacaaggacatggagacacaaccctgtctcatgagctctgaaaacatggacatggagaaacaaccctgtctcatgagctctgaaaacaaggacatggagacacaaccctgtctcatgagctctgaaaacaaggacatggagacacaaccctgtctcatgagctctgaaatcaaggacatggagacacaaccctgtctcatgagctctgaaaacaaggacatggagacacaaccctgtctcatgagctctgaaaacaaggacatggagacacaaccctgtctcatgagctctgaaaacaaggacatggagacacaaccctgtctcatgagctctgaaatcaaggacatggagacacaaccctgtctcatgagctctgaaaacaaggacatggagaaacaaccctgtctcatgagctctgaaaacaaggacatggagacacaacactgtctcatgagctctgaaaacaaggacatggagacacaaccctgtctcatgagctctgaaatcaaggacatggagacacaaccctgtctcatgagctctgaaaacaaggacatggagacacaaccctgtttcatgagctctgaaaacaaggacatggagacacaaccctgtctcatgagctttgaaaacaaggacatggagacacaaccctgtctcatgagctctgaaaacaaggacatggagacacaaccctgtctcatgagctctgaaaacaaggacatggagacacaaccctgtctcatgacacaaccaccaaggacatggagacacaaccctgtctcatga
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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