LOCUS       XM_064558029            2809 bp    mRNA    linear   VRT 25-APR-2024
DEFINITION  PREDICTED: Latimeria chalumnae ClpB family mitochondrial
            disaggregase (CLPB), transcript variant X1, mRNA.
ACCESSION   XM_064558029
VERSION     XM_064558029.1
DBLINK      BioProject: PRJNA1100969
KEYWORDS    RefSeq.
SOURCE      Latimeria chalumnae (coelacanth)
  ORGANISM  Latimeria chalumnae
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Coelacanthiformes; Coelacanthidae; Latimeria.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_088142) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_037176945.1-RS_2024_04
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 04/18/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2809
                     /organism="Latimeria chalumnae"
                     /mol_type="mRNA"
                     /isolate="fLatCha1"
                     /db_xref="taxon:7897"
                     /chromosome="4"
                     /sex="female"
                     /tissue_type="blood"
                     /dev_stage="adult"
                     /geo_loc_name="Comoros: Grande Comore Island, Africa"
                     /lat_lon="11.583333 S 43.333333 E"
                     /collection_date="2003"
                     /collected_by="Ahamada Said"
     gene            1..2809
                     /gene="CLPB"
                     /note="ClpB family mitochondrial disaggregase; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 5 Proteins"
                     /db_xref="GeneID:102361298"
     CDS             116..2158
                     /gene="CLPB"
                     /codon_start=1
                     /product="mitochondrial disaggregase isoform X1"
                     /protein_id="XP_064414099.1"
                     /db_xref="GeneID:102361298"
                     /translation="

MWTTTATRAGLLRCLRCRLSGFARLGLRPAAGPEPAAPAAASHLQGGGGGLQSSRPAAGWRGGHEQPECRAESARGRGGFEQLQYGAVAARGRSDRRENSQDGEQTESLGTAIGVSAFTAAAVAHCVSKDSRSKGDTLLEAARTNDIQELRRMLAEGAEVNYRHSLGWTPLMVAAMNRNHSAVQVLLAAGANPDLGDEFSNVYETAREKGIHSLEVLVTREDDFCNRLNNRASFKGCTALHYAVLADDLRTVRNLLEAGANPLQRNEMGHTPTDYAREGEVMKLLREWETKYQEQRRKREAEERRRFPLEQRLKEYIIGQESAIATVAAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQVAKYMHKDAKKGFIRLDMSEFQEKHEVAKFIGSPPGYVGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIECKDAIFIMTSNVASDEIAQHGLQLRQEAQEISKKRIAENLDDVQISEKITISKRFKENVIRPILKSHFRRDEFLGRINEIVYFLPFCHSELIQLVSKELTFWAKKAKQRHSITLQWDREVMDVLVDGYNLHYGARSIKHEVERRVVNQLAAAYEQDLLPRGCTLRITVEDSDKKILKDRGDRSSSGVGGEGKPPRIRLEIIEMDSKSRKLDIRAPLQPEDSAYSL"

     polyA_site      2809
                     /gene="CLPB"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

tctagcgttggccaaggccgccaccttggtttcccttctttcgagcgtcgctaagggaggctggtttttttttcccgaatacttaccgtccctttgacttgggtttgcggccggaatgtggacgacgacggcaaccagggcaggtctgctccggtgtctccgctgccggttgtccgggttcgcccggttagggctgcggcccgctgcaggccccgaaccggcggcaccggcggccgcgtcccaccttcagggcggcggcggggggctgcagtcctcacggccggccgctgggtggcgcggcgggcacgagcagccggaatgccgcgcggagtccgccagggggcgcggcgggttcgagcagctgcagtacggcgcggtggccgccagggggcgctcagaccgccgtgaaaattctcaggatggggagcagacagaaagcctgggcacagccattggggtttcagcgtttactgctgcggctgtggctcattgcgtcagcaaagattcccgttctaaaggtgacactctgctggaagctgccaggaccaatgacatccaggagctcaggaggatgctggcagaaggagcagaagtgaattatcgccacagtctgggttggactccactgatggtggctgcaatgaacaggaaccacagtgcggtgcaagtcttgctggcggctggcgccaacccagacctgggggatgaattcagcaacgtgtacgagacagccagggagaagggaatacactctctggaagtgctggtgacgagagaagatgacttctgcaaccgtttgaataaccgagccagctttaaagggtgtacagctctccactacgctgtgctggctgatgacctcaggaccgtcaggaacctgctcgaggcaggtgccaaccccctgcagcggaacgaaatggggcacacgccaaccgactacgcccgggaaggagaggtcatgaaattattgcgtgaatgggaaacaaagtatcaagaacagcggcgaaagcgagaagctgaggagcgccggcgatttcctctggaacagcggctgaaagagtacatcattggccaggagagcgccatcgcaaccgtagcagcagccatacggaggaaggagaacggctggtacgacgaagagcatcctctggtctttctcttcctggggtcgtctggaatagggaagaccgagctggccaagcaagtcgctaagtacatgcacaaggatgctaagaagggatttatcagattggatatgtccgagttccaagaaaaacatgaggtagccaagttcattggttctccccctggttacgtgggccatgaagagggaggccagctgaccaagaagctgaagcagtgtcccaatgcagtggtcctctttgatgaggtggacaaggcccaccccgatgtcctcaccatcatgttacagctatttgatgaaggcaggctgactgatggaaaagggaagaccattgagtgcaaggacgccatttttatcatgacctccaacgtggcaagtgacgagatcgcccaacacgggttgcagctgagacaggaagcccaggagatcagcaagaagaggatagcggagaatctagatgatgtgcagatcagtgagaaaataaccatatccaaacgcttcaaagagaacgttattcgcccaattttgaagagtcattttcggcgggatgagtttttgggcagaattaacgagattgtctacttcctgccgttttgccattctgagctcatccagctagtcagcaaggagttaactttctgggccaagaaggcaaagcagaggcatagcatcaccttacagtgggaccgagaggtaatggacgtgttggtggatggatacaatttacactatggcgcccgatctatcaaacatgaggttgagcggcgggttgttaaccagttagccgctgcatatgagcaggacttgctaccacgagggtgtactctccgaatcaccgttgaggactcagacaagaaaattctaaaggacagaggcgacagaagcagctcaggggtcgggggagaaggcaagcctcccagaatccggctggagattatcgagatggacagtaaaagcaggaaactagacatcagggcccccttacagcctgaagacagcgcttactctttatgattatggcaggcactcggattgctatttcatacaaggagtgaacaagccaaatgccccttatgctcaggaggtatcgcctgctctttgtcatcatcccaacaccctgtagataccttgtgttgtttactagccatccacaggcctcaaagacgttgccatgaagcagtctggagcccaagacgccccaaagggttcttgcattcaacaatgcagacacctgagagttattacttgctgtccgttaaacaatccggggactcccaattcaacagtcatttcgttgcggtgaagttacggcactgttaaccgtgtcacccatgagtcaacttggcattcccaacagcgataatttgtgataaaaacctgagtttatgtgagatggtaggggtgtaacgatacgtcagtggatcgtgggctttttgttgtttttgtttttttttcaccggacaatgcatattgtgatgcagactcatggtgtcatgatatgccataatacgctggcattattaccttaggacaccttggaagtttcccgtgctggagctttgtctgctacatcaggggctcttgttgaactttgtatacaatatatcgattttgtttgtttcatgtgctttgtccataataaaataaaatataaaatttcataaa

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