LOCUS       XM_063641350            2341 bp    mRNA    linear   PRI 17-JUL-2024
DEFINITION  PREDICTED: Symphalangus syndactylus ClpB family mitochondrial
            disaggregase (CLPB), transcript variant X8, mRNA.
ACCESSION   XM_063641350
VERSION     XM_063641350.1
DBLINK      BioProject: PRJNA946760
KEYWORDS    RefSeq.
SOURCE      Symphalangus syndactylus (siamang)
  ORGANISM  Symphalangus syndactylus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hylobatidae; Symphalangus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_072428) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_028878055.3-RS_2024_07
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 07/16/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2341
                     /organism="Symphalangus syndactylus"
                     /mol_type="mRNA"
                     /isolate="Jambi"
                     /db_xref="taxon:9590"
                     /chromosome="6"
                     /sex="male"
                     /cell_line="Jambi"
                     /cell_type="lymphoblastoid"
                     /tissue_type="blood"
     gene            1..2341
                     /gene="CLPB"
                     /note="ClpB family mitochondrial disaggregase; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 21 long SRA reads, 2 Proteins"
                     /db_xref="GeneID:129484566"
     CDS             383..2281
                     /gene="CLPB"
                     /codon_start=1
                     /product="mitochondrial disaggregase isoform X8"
                     /protein_id="XP_063497420.1"
                     /db_xref="GeneID:129484566"
                     /translation="

MPRGCHLETPSWPRRNTPRTGQLERGPQQGRTGHVGPGRSAGGSLLQQESVQQGCSPVGSCPCQQYARSQQPQETAKNDAQSRSWAGLKAGVSLKNTKISPSEWPLRLLSEGADVNAKHRLGWTALMVAAINRNNSVVQVLLAAGADPNLGDDFSSVYKTAKEQGIHSLEVLITREDDFNNRLNNRASFKGCTALHYAVLADDYRTVKELLGGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQEKQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMSRNRIAENLGDVQISDKITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITVEDSDKQLLKSPELPSPQAEKRLPKLRLEIIDKDSKTRKLNIRAPLHPEKVCNTI"

     misc_feature    <701..1120
                     /gene="CLPB"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     Region: ANKYR; COG0666"
                     /db_xref="CDD:440430"
     misc_feature    743..838
                     /gene="CLPB"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    950..1027
                     /gene="CLPB"
                     /note="ANK repeat [structural motif]; Region: ANK repeat"
                     /db_xref="CDD:293786"
     misc_feature    <1172..2122
                     /gene="CLPB"
                     /note="ATP-dependent Clp protease, ATP-binding subunit
                     ClpA [Posttranslational modification, protein turnover,
                     chaperones]; Region: ClpA; COG0542"
                     /db_xref="CDD:440308"
     polyA_site      2341
                     /gene="CLPB"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

gcttagggctgtggactacccctcccgtgaggtagtgcgcaactccaccctgttcgcggcgtcttcgaacgcgccgcggcagccatgttggacgtggccagcacaggggccggcaccacggggttatcgaagcaactgtcaagatgctagggtccctggtgttgaggagaaaagcaccggcgccacggctactcctccggctgctcaggtccccaacgctccggggccatggaggtgcttctggccggaatgtgaccactgggagtctcggggagccgcagtggctgagggtagccgccggggggcgccctggaacatccgccttgttctccggacgcggggcagccaccggggggcgccagggaggacgcttcgataccaaatgcctcgcggctgccacttggagacgccttcctggccccgaagaaacactcccaggacaggacagctggaacggggtccccagcagggccggactgggcatgtgggccctggccgcagcgctggtggttcattgctacagcaagagtccgtccaacaaggatgcagccctgttggaagctgcccgtgccaacaatatgcaagaagtcagcagccccaagagactgcaaagaatgatgctcagtcaagaagctgggcagggctgaaagctggagtctcactgaagaacaccaagatttccccctctgaatggcccctcaggctgttgtcagaaggtgcagatgtcaatgcaaagcacagacttggctggacagcactcatggtggcagccatcaaccgaaacaacagtgtggtacaggtcctgcttgctgccggggctgatccaaaccttggagatgattttagcagtgtttacaagactgccaaggaacagggaatccattctttggaagtcctgatcacccgagaggatgacttcaacaaccggctgaacaaccgcgccagtttcaagggctgcacggccttgcactatgctgtccttgctgatgactaccgcactgtcaaggagctgcttggtggaggagccaaccccctgcagaggaatgaaatgggacacacacccttggattatgcccgagaaggggaagtgatgaagcttctgaggacttctgaagccaagtaccaagagaagcagcggaagcgtgaggccgaggagcggcgccgcttccccctggagcagcgactgaaggagcacatcattggccaggagagcgccatcgccacagtgggtgctgcgatccggaggaaggagaatggctggtacgatgaagaacaccctctggtcttcctcttcttgggatcatctggaataggaaaaacagagctggccaagcagacagccaaatatatgcacaaagatgctaaaaagggcttcatcaggctggacatgtccgagttccaggagcgacacgaggtggccaagtttatcgggtccccaccaggctacgttggccatgaggagggtggccagctgaccaagaagttgaagcagtgccccaatgctgtggtgctctttgatgaagtagacaaggcccatccagatgtgctcactatcatgctgcagctgtttgatgagggccggctgacagatggaaaagggaagaccattgattgcaaggacgccatcttcatcatgacctccaatgtggccagcgacgagatcgcacagcacgcgctgcagctgaggcaggaagctctggagatgagccgtaaccgtattgccgaaaacctgggggacgtccagataagtgacaagatcaccatctcaaagaacttcaaggagaatgtgattcgccctatcctgaaagctcacttccggagggatgagtttctgggacggatcaatgagatcgtctacttcctccccttctgccactcggagctcatccaactcgtcaacaaggaactaaacttctgggccaagagagccaaacaaaggcacaacatcacgctgctctgggaccgcgaggtggcagacgtgctggtcgacggctacaatgtgcactatggcgcccgctccatcaaacatgaggtagagcgccgtgtcgtgaaccagctggcagcagcctacgagcaggacctgctgccagggggctgtactctgcgcatcacggtggaggactcagacaagcagctactaaagagcccagaactgccctcaccccaggctgagaagcgcctccccaagctgcgtctggagatcatcgacaaggacagcaagactcgcaaactgaacatccgggcacccctgcaccctgagaaggtgtgcaacaccatctagcagccacctgcctgctcctgtgtgccctcaccatccaataaaggccccttggcagtggca

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