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2025-04-20 02:30:55, GGRNA.v2 : RefSeq release 229 (Mar, 2025)

LOCUS       XM_062674540            1578 bp    mRNA    linear   INV 05-FEB-2024
DEFINITION  PREDICTED: Bombyx mori glutathione S-transferase epsilon 6 (GSTe6),
            transcript variant X3, mRNA.
ACCESSION   XM_062674540
VERSION     XM_062674540.1
DBLINK      BioProject: PRJNA1068671
KEYWORDS    RefSeq.
SOURCE      Bombyx mori (domestic silkworm)
  ORGANISM  Bombyx mori
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata;
            Ditrysia; Bombycoidea; Bombycidae; Bombycinae; Bombyx.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_085127) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030269925.1-RS_2024_01
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 01/25/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1578
                     /organism="Bombyx mori"
                     /mol_type="mRNA"
                     /db_xref="taxon:7091"
                     /chromosome="21"
     gene            1..1578
                     /gene="GSTe6"
                     /gene_synonym="GST12"
                     /note="glutathione S-transferase epsilon 6; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 56 long SRA reads, 26 Proteins"
                     /db_xref="GeneID:100141445"
     CDS             234..920
                     /gene="GSTe6"
                     /gene_synonym="GST12"
                     /codon_start=1
                     /product="glutathione S-transferase epsilon 6 isoform X1"
                     /protein_id="XP_062530524.1"
                     /db_xref="GeneID:100141445"
                     /translation="
MTPILYKTDASPPARAVMMIVDILGLKVDEQELNPILRQQDTPEFKKKNPMRTIPILEEGDFYLADSHAIMLYLIDKYGKPEHAHLYPSEKRKRATINQRLFFDCGVLFPRLRAVMAPTYAGKLAELNRNMIKNIEDAYSIMESYLTENLYLADEVVTVADISAITTISSLNGLYPVDEKRYPKLSKWINRMNDKEYCRKINTPGSELHVAGLIALMDNTKHNQQSKL"
     polyA_site      1578
                     /gene="GSTe6"
                     /gene_synonym="GST12"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
gaaattaataaaggtcctcatttggtctcgatttggctcttaaacataaattgagtaaagcgacatctatgagaaaatcgtttaattaatatcttatcttggacatagacctcgaatggtactttggactttagtttgaagaagcaagcggtcaaggaattctaatttagaaaataatacacgtaggctaataaaacaggataaacacaaaatttgaaatataaattgataaaatgactccgatattatacaagactgacgccagtccgcctgctagggctgtgatgatgattgttgatatattgggactaaaagttgacgagcaggaactgaatccaatattacgccaacaagacacaccggaatttaaaaaaaaaaatccaatgagaactattcctatattagaggaaggagatttctacctcgcggatagtcacgccattatgttgtacttgatcgataaatacggtaaaccggaacacgctcatctctatccgagcgagaaaaggaaacgagctacaataaatcaacgacttttctttgactgcggagtgctattccctagattgagggccgttatggcaccaacgtacgcaggaaaattagcggaattgaatcgaaacatgatcaagaacatcgaggatgcttattcaataatggaatcctatctaacagagaatttgtatctagctgatgaagttgtcactgtagcggacataagcgcaataacgactatttcgtctttgaacggcttgtacccggtagatgagaaaagatatccaaaacttagcaaatggataaacagaatgaacgataaagaatattgtagaaagatcaacactcccggaagcgagctacatgtggccggtttgatagccttaatggacaatactaaacacaatcagcaatcaaaactttagaatagcttggccccgcggcgtcgcccgctgtactacaataaccgcgggtaacatcgcgggactcaactatcaataataaaatttaatatttccgaagcgaagcgagggcgggtcgccagtactaatatataaatctacagtggtatttacggatgttccgttataactactgaaccgtgcatccgattgacttgaaacttggtatccatgtagaaaatacatatacttaaaggataggctaatatttatatgagtgttggactccctacaccagttgcgggggcgttaatgatcagaatctttgtgggggtgagaaataataatgttaattttacccagcgaagcggacgggtacagctagtttgttataatgtacgtatttacgatagtaattatgttgttggaaaacagaatatattaaacattcatatatttttacacaacagagtttatgttaaaaatatgtactaatcatgtttagttcgtattcagacatttcttcaataaaaaaatacattaaatgttgtttttattaatttgttcattgtatttgtaactaactatagtcaacaattatttggatttaaaaaagcttttcaagaatgtaattcaaaataatatcatatgaacgtactcattaaatttattaataaactaa
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]