2025-04-20 02:30:48, GGRNA.v2 : RefSeq release 229 (Mar, 2025)
LOCUS XM_062670844 1958 bp mRNA linear INV 05-FEB-2024 DEFINITION PREDICTED: Bombyx mori glutathione S-transferase omega 2 (GSTo2), transcript variant X3, mRNA. ACCESSION XM_062670844 VERSION XM_062670844.1 DBLINK BioProject: PRJNA1068671 KEYWORDS RefSeq. SOURCE Bombyx mori (domestic silkworm) ORGANISM Bombyx mori Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Bombycidae; Bombycinae; Bombyx. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_085117) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030269925.1-RS_2024_01 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.2 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 01/25/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1958 /organism="Bombyx mori" /mol_type="mRNA" /db_xref="taxon:7091" /chromosome="11" gene 1..1958 /gene="GSTo2" /gene_synonym="GST6; Gsto" /note="glutathione S-transferase omega 2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 ESTs, 819 long SRA reads, 38 Proteins" /db_xref="GeneID:692941" CDS 1147..1917 /gene="GSTo2" /gene_synonym="GST6; Gsto" /codon_start=1 /product="glutathione S-transferase omega 2 isoform X3" /protein_id="XP_062526828.1" /db_xref="GeneID:692941" /translation="
MSAIKDSRNINFNTKHLRKGDPLPPFNGKLRVYNMRYCPYAQRTILALNAKQIDYEVVNIDLIDKPEWLTTKSAFAKVPAIEIAEDVTIYESLVTVEYLDEVYPKRPLLPQDPLKKALDKIIVEASAPIQSLFIKILKFSDTVNEEHVAAYHKALDFIQEQLKNRGTVFLDGSEPGYADYMIWPWFERLRAFAHDERVRLEPSKYSLLLEYIDNMLKDSAVSQYLIPLEILAKFHEAYTKKERPNYELLNECLKSF"
polyA_site 1958 /gene="GSTo2" /gene_synonym="GST6; Gsto" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN
agacttgcgcaaaacatcacttcccaatgtaatgtgatatgacatcacttttacagataggtgatattactcgaaaacattacacatcactcataacattactcggtgcgttcaaagtgatgtgtataaacacatcacttaggtaatgattcgggtgtatagatacaatgtattcgtcgtcacagtatctattgaacgcaccgagtaatgttaagagtgatgtgtaatgttttcatcaatcattacctaagtgatgtgtataaacacatcacttaggtaatgattcgggtgtgtcattacagtagtgtattacaatacaaagtatgaactttgtattgtaatacactgttatattacttgacagattgacttacttaataatataataattttattttttacttaatataatttattgtgggatgaacggatttcatatggcgacttagactgcaaattgagctcgacaataatgttaatatacgagagcagtagatgcattgtttcggcgcgatatcctcaaagtgcatccaaggaggactgtactttcatttagacgccgttatttctttcacttattaaacacgcattaaaacaaataataaaactatcttcaaacaagtgcttaagtaattcaaatcaaacacaaaaattaatataaaatattactaaacaattacgagcgactagcgattttacaaaagttgcgaataaaaaattaagtaagtacttgcggggagctaccggctggccgcatgaaaaatataaacacaaatacctatattaaaattcagacgtaccataggtataaaaatgtacctagcggccaggacatacggttcaaaatcactaggaataattccgtgtcgcttgctcatttattttgcgtcgatcggtctgtctcgctcgctcggttccgttcatgtattaagcaacattacacgacaaagaaagaaacatgttgggtgatagtgtgatgtttgtttccttcgcgtaatgtgtgatgttgcattacatcgtagagtaatattacccgagtaatatcactcgcattacttacacatgtctaatgcgtagatatgtgttcgagttatcagtcaagtattagaatacgtcttaccttatactggtgtaccatttcgaaatatgtctgcaattaaggacagcagaaatatcaactttaacacaaagcatttaaggaaaggtgatcctttaccgcctttcaatggaaaattgcgagtgtacaacatgaggtattgcccctacgctcagcgaaccattctagctcttaacgcgaaacaaattgactatgaggttgtaaatattgatctgatcgacaaacctgagtggctgacaactaaaagtgccttcgcaaaagttccagcgatagaaatagcagaagatgtgaccatttacgaaagcttagtgacagttgaatatttagatgaggtctatccgaaaaggcctttactgccgcaagatcctttgaagaaagcattggacaaaattattgtagaagcatcggcgcctattcagtcgctttttataaagattctaaaattctccgacactgtcaatgaggagcatgttgctgcgtaccacaaggctttagatttcatccaggaacagttgaaaaaccgaggcactgtgttcttggacggaagtgaacctggatacgctgattatatgatatggccttggttcgagaggcttagggcatttgcacatgatgaaagagtgagacttgaaccgtctaagtattctttactgttggagtacatagacaacatgttgaaggactctgccgtgagccagtacttaattccgctggagattttggccaaatttcatgaagcctacaccaaaaaagagagaccgaactatgaattgttaaatgaatgtttgaaatcattttaaaatatgtgttaataaattcataagaattcataacagtaaaa
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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