2025-04-22 02:40:02, GGRNA.v2 : RefSeq release 229 (Mar, 2025)
LOCUS XM_048850539 1362 bp mRNA linear VRT 02-JUL-2022 DEFINITION PREDICTED: Caretta caretta cerberus 1, DAN family BMP antagonist (CER1), mRNA. ACCESSION XM_048850539 VERSION XM_048850539.1 DBLINK BioProject: PRJNA853764 KEYWORDS RefSeq. SOURCE Caretta caretta (Loggerhead turtle) ORGANISM Caretta caretta Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Caretta. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_064477) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: Caretta caretta Annotation Release 100 Annotation Version :: 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1362 /organism="Caretta caretta" /mol_type="mRNA" /isolate="SJ_126:Eziel1" /db_xref="taxon:8467" /chromosome="5" /sex="female" /tissue_type="blood" /dev_stage="adult" /collection_date="2020-06-05" /collected_by="Fondazione Cetacea hospital" gene 1..1362 /gene="CER1" /note="cerberus 1, DAN family BMP antagonist; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:125636820" CDS 391..1218 /gene="CER1" /codon_start=1 /product="cerberus" /protein_id="XP_048706496.1" /db_xref="GeneID:125636820" /translation="
MFLLLLQLLVISGLGATGQGGELQTNKRRRLQHLSYQDKDLLEREDPSKLLVQDLMDYEEILEEPSLFVAAPELAAESRKQGEKKSSRFILPYVELDVYRDQGSWTAPKETSHSENMRHFLPSHSVNKKEAEPPYRKDAKKFWDHFMLKKNSASEEVVLPIKTNEMYQETCRTLPFSQSIVHENCEKVVVQNNLCFGKCSSFHVPGPEDRLYTFCSHCLPTKFTMKHLELNCTRSVAVVKVVMIVEDCKCEIQKIKDSEIGPLHSDLNSNVYEHN"
misc_feature 841..1143 /gene="CER1" /note="DAN domain; Region: DAN; pfam03045" /db_xref="CDD:460786" ORIGIN
gtaagtgaaaaaatataaaggacatgttgaatgagctaataaacattcaggaacttttccacagttcaagactacagctaaacaacttatccaaacatttttttccaactaatcacccccctggggaaccaggttttagataggaacttctaatacacacatccaggagtaaaagatgggttgaattaacacaaattcccttatcataattataatctacagtaaatgagtttaactggttaccctggttaccctttgtaccccccaacccccagcatccacagaatggcttcagtctcatttataaagctagcagactacatgccgcttcctttgctcacctgaaactgcaggacgattaaattaaaagtccacacaagtaagattagcatgtttctgctgctgcttcaactgcttgtgatctcaggtcttggagcaacaggacaaggtggagagctgcaaacgaacaagaggaggagacttcagcacctttcctaccaagataaagatttacttgaaagagaggaccctagcaagttgctggtgcaagatctcatggattatgaagaaatcctagaagaaccaagtttatttgtagcagccccagagctggcagcagagagcaggaagcaaggagaaaaaaaatcatccagatttatccttccctacgtagagcttgatgtgtaccgagatcagggaagctggactgcaccaaaagagacctcccattctgaaaacatgagacatttcctaccttcccactcagtcaacaagaaggaagctgagcccccctacagaaaagatgctaaaaaattctgggaccatttcatgttaaaaaaaaattcagcttctgaggaggttgtcttgccaatcaagaccaacgagatgtaccaggagacctgcaggacgctgcctttttcccagagtattgtgcatgagaactgtgaaaaggtggtggtgcagaacaacctgtgctttgggaagtgtagttcctttcatgtccctggcccagaagatcgtctttacaccttttgttcccactgcttgcctaccaagttcaccatgaaacacttggagctgaactgcaccaggtctgttgccgtggttaaagtggtcatgattgtggaggattgcaagtgtgagattcagaagattaaagattctgaaattggacccctacattcagacttgaattcaaatgtatatgaacacaattaacctgctcaaaagcacctttaaactccataatcatgagcatcttcaaggaaaaaataactatgattttagtcagatacctccatcaactgtgtgaagatgtagattatctctttacatcatgtataatcaaaaagaaaaggagga
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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