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2025-04-22 02:40:02, GGRNA.v2 : RefSeq release 229 (Mar, 2025)

LOCUS       XM_048850539            1362 bp    mRNA    linear   VRT 02-JUL-2022
DEFINITION  PREDICTED: Caretta caretta cerberus 1, DAN family BMP antagonist
            (CER1), mRNA.
ACCESSION   XM_048850539
VERSION     XM_048850539.1
DBLINK      BioProject: PRJNA853764
KEYWORDS    RefSeq.
SOURCE      Caretta caretta (Loggerhead turtle)
  ORGANISM  Caretta caretta
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira;
            Americhelydia; Chelonioidea; Cheloniidae; Caretta.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_064477) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: Caretta caretta Annotation Release
                                           100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1362
                     /organism="Caretta caretta"
                     /mol_type="mRNA"
                     /isolate="SJ_126:Eziel1"
                     /db_xref="taxon:8467"
                     /chromosome="5"
                     /sex="female"
                     /tissue_type="blood"
                     /dev_stage="adult"
                     /collection_date="2020-06-05"
                     /collected_by="Fondazione Cetacea hospital"
     gene            1..1362
                     /gene="CER1"
                     /note="cerberus 1, DAN family BMP antagonist; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:125636820"
     CDS             391..1218
                     /gene="CER1"
                     /codon_start=1
                     /product="cerberus"
                     /protein_id="XP_048706496.1"
                     /db_xref="GeneID:125636820"
                     /translation="
MFLLLLQLLVISGLGATGQGGELQTNKRRRLQHLSYQDKDLLEREDPSKLLVQDLMDYEEILEEPSLFVAAPELAAESRKQGEKKSSRFILPYVELDVYRDQGSWTAPKETSHSENMRHFLPSHSVNKKEAEPPYRKDAKKFWDHFMLKKNSASEEVVLPIKTNEMYQETCRTLPFSQSIVHENCEKVVVQNNLCFGKCSSFHVPGPEDRLYTFCSHCLPTKFTMKHLELNCTRSVAVVKVVMIVEDCKCEIQKIKDSEIGPLHSDLNSNVYEHN"
     misc_feature    841..1143
                     /gene="CER1"
                     /note="DAN domain; Region: DAN; pfam03045"
                     /db_xref="CDD:460786"
ORIGIN      
gtaagtgaaaaaatataaaggacatgttgaatgagctaataaacattcaggaacttttccacagttcaagactacagctaaacaacttatccaaacatttttttccaactaatcacccccctggggaaccaggttttagataggaacttctaatacacacatccaggagtaaaagatgggttgaattaacacaaattcccttatcataattataatctacagtaaatgagtttaactggttaccctggttaccctttgtaccccccaacccccagcatccacagaatggcttcagtctcatttataaagctagcagactacatgccgcttcctttgctcacctgaaactgcaggacgattaaattaaaagtccacacaagtaagattagcatgtttctgctgctgcttcaactgcttgtgatctcaggtcttggagcaacaggacaaggtggagagctgcaaacgaacaagaggaggagacttcagcacctttcctaccaagataaagatttacttgaaagagaggaccctagcaagttgctggtgcaagatctcatggattatgaagaaatcctagaagaaccaagtttatttgtagcagccccagagctggcagcagagagcaggaagcaaggagaaaaaaaatcatccagatttatccttccctacgtagagcttgatgtgtaccgagatcagggaagctggactgcaccaaaagagacctcccattctgaaaacatgagacatttcctaccttcccactcagtcaacaagaaggaagctgagcccccctacagaaaagatgctaaaaaattctgggaccatttcatgttaaaaaaaaattcagcttctgaggaggttgtcttgccaatcaagaccaacgagatgtaccaggagacctgcaggacgctgcctttttcccagagtattgtgcatgagaactgtgaaaaggtggtggtgcagaacaacctgtgctttgggaagtgtagttcctttcatgtccctggcccagaagatcgtctttacaccttttgttcccactgcttgcctaccaagttcaccatgaaacacttggagctgaactgcaccaggtctgttgccgtggttaaagtggtcatgattgtggaggattgcaagtgtgagattcagaagattaaagattctgaaattggacccctacattcagacttgaattcaaatgtatatgaacacaattaacctgctcaaaagcacctttaaactccataatcatgagcatcttcaaggaaaaaataactatgattttagtcagatacctccatcaactgtgtgaagatgtagattatctctttacatcatgtataatcaaaaagaaaaggagga
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]