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2024-11-15 16:35:51, GGRNA.v2 : RefSeq release 226 (Sep, 2024)

LOCUS       XM_046959598            7230 bp    mRNA    linear   INV 01-MAR-2022
DEFINITION  PREDICTED: Vespa crabro mucin-19-like (LOC124422741), mRNA.
ACCESSION   XM_046959598
VERSION     XM_046959598.1
DBLINK      BioProject: PRJNA809765
KEYWORDS    RefSeq.
SOURCE      Vespa crabro (European hornet)
  ORGANISM  Vespa crabro
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
            Aculeata; Vespoidea; Vespidae; Vespinae; Vespa.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_060957) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Vespa crabro Annotation Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 9.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7230
                     /organism="Vespa crabro"
                     /mol_type="mRNA"
                     /db_xref="taxon:7445"
                     /chromosome="3"
     gene            1..7230
                     /gene="LOC124422741"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 114 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 1 sample with support for all annotated introns"
                     /db_xref="GeneID:124422741"
     CDS             53..7057
                     /gene="LOC124422741"
                     /codon_start=1
                     /product="mucin-19-like"
                     /protein_id="XP_046815554.1"
                     /db_xref="GeneID:124422741"
                     /translation="
MKVSATSLLFIVVSTTALSIPAGNRQSQEIGSISNPINNVRASQGINAGINAGINANAKVGSKTGVNSNINAGNRQGQGIGSISNSINNIRASQGINAGINAGINAGINAGINAGINAGINANAKGGSKTGANFNINAGVQAQSKGKSNVGANLGIHAGLGQQWNIPSYSKHSGHNNDNYNNKGYSYYFPRIIEFPKIPKLPHIPLPFPLWSTKTTTTTTEKPCDESSMTTTTAKPTKAPTSKPSPSTKSTSTTKKSSEAPSSSASPSSEKIPCEESSAAPSSSAHPSSTSSKKPSEAPSSSASPSSSSSEKPSEATNSSASQSSETTPCEESSVTPSSSAVPSSSNSEKPSEAPSSSVSPSSSSSEQPSEAPSSSVPPSSSSSEQPSEATSSSVSTSSPSSEQPSEAPSSSPSPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSESTPCEESSVAPSSSPSPSSSSSEQPSEAPSSSASPSSPSSEQPSEPPSSSASPSSSSSGQPSEAPSSSASPSSSSSEQPSQAPSSSASPSSESTPCEESSVAPSSSPSPSSSSSEQPSEAPSSSPSPSYPSSEQPSEAPSSSASPSSSSSGQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSGQPSEPPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSQAPSSSASPSSESTPCEEYSVDPSSSASPSSSSSEQPSEAPSSSASPSSSSSGQPSEPPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSPSSEQPSEATSSSASPSSSSSGQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEVPSSSGSPSSESTPCEEYSVAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSNSGQPSEPPSSSASPSSSSSEQPSEAPSSSASPSSSSSGQPSEPPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSPSSEQPSEATSSSASPSSSSSGQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSGSPSSESTPCEEYSVAPSSSVSPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSGQPSEPPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSPSSEQPSEAPSSSASPSSSSSGQPSEDPSSSASPSSSSSEQPSEAPSSSASPNSSSSEQPSEAPSSSGSPSSESTPCEEYSVAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSPSSEQPSEAPSSSASPSSSSSGQPSEAPSSSASPSSSSSGQPSEAPSSSASPSSSSSGQPSEAPSSSASPSSSSSGQPSEAPSSSASPSSPSSEQPSEAPSSSASPSSSSSGQPSEAPSSSASPSSSSSGQPSEAPSSSASPSSSSSGQPSEAPSSSASPSSSSSGQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSGQPSEAPSSSASPSSSSSEQPSEAPSSSGSPSSESTPCEEYSVAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSGQPSEPPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSPSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSGQPSEAPSSSASPSSSSSGQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSNSGQPSEAPSSSASPSSSSSEQPSEAPSSSGSPSSESTPCEEYSVAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSGQPSEAPSSSASPSSSSSEQPSEAPSSSTSPSSSSSEQPSEAPSSSASPSSPSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSGQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQSSEAPSSSGSPSSESTPCEEYSVAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSGQPSEAPSSSASPSSPSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQSSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSGEPSEAPSSSASPSSESTPCEESSVASSSSASPSSSSSIHPSGGPSSSLPSSGSTPWISSTRFPHHFTDSVGRQCYCY"
     misc_feature    <167..>538
                     /gene="LOC124422741"
                     /note="serine-rich protein; Region: ser_rich_anae_1;
                     NF033849"
                     /db_xref="CDD:468206"
     polyA_site      7230
                     /gene="LOC124422741"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
taccatgcttgaatcctcaaaattttgaaagtggaataggaagcaagcgatcatgaaggtatccgcgacctctctactcttcattgtggtttctaccacggccctctcgataccagcaggtaatcgacagagtcaagaaataggatcaatatcaaatccaataaacaatgtcagagctagccaaggaataaatgcaggaataaatgcaggaataaatgcaaatgcaaaagtaggatcaaaaacaggagttaattccaatataaatgcaggtaatcgacagggtcaaggaataggatcaatatcaaattcaataaacaatatcagagctagccaaggaataaatgcaggaataaatgcaggaataaatgcaggaataaatgcaggaataaatgcaggaataaatgcaggaataaatgcaaatgcgaagggaggatcaaaaacaggagctaatttcaatataaatgcaggagtacaagcacaatcgaaaggaaaatcaaatgtaggagctaatttaggtatacatgcaggattaggtcaacaatggaatattccgtcttattccaaacattctggacataataatgataattataataataagggttattcatattactttcctcgaataatcgaatttcctaaaatacctaaacttcctcatatacccttacctttccccctttggtctacgaaaactacaaccactacaactgaaaaaccatgcgacgaatcaagtatgactactactactgcaaaaccaacaaaagcaccaacgagtaaaccatcaccaagtactaaatctacttcaaccactaaaaaatcaagtgaagcaccgagcagttcggcgtcaccaagttctgaaaaaattccttgcgaagaatctagcgcagcaccaagcagctctgcccacccaagttctacgagctcaaaaaaaccaagtgaagcaccgagcagttctgcctcgccaagttcgtccagttctgaaaaacccagcgaagcaacaaacagttcggcatcacaaagttctgaaactactccatgtgaagaatctagcgtaacacctagcagctctgcagttccaagttcgtccaattctgaaaaacccagtgaagccccgagcagctctgtttcaccaagttcttccagctctgaacaacccagcgaagccccaagcagctctgtcccgcctagttcttccagttctgaacaacccagtgaagcaaccagcagctcggtctcaacaagttctcccagttctgaacaaccaagcgaagcacccagcagctctccctcgccaagttcttccagctctgaacaacccagtgaagccccaagcagctctgcctcacctagttcttcaagttctgaacaaccaagcgaagcaccgagcagttcggcatcaccaagttctgaatctactccttgtgaagaatctagcgtagcacccagcagctctccctcgccaagttcttccagctctgaacaacccagcgaagcacccagcagctcggcctcaccaagttctcccagttctgaacaaccaagcgaacctccaagcagttcggcatcaccaagttcttccagctctggacaaccaagcgaagcgccaagcagctctgcctcacctagttcttcaagttctgaacaacccagccaagcaccgagcagttcggcatcaccaagttctgaatctacaccttgtgaagaatctagcgtagcacccagcagctctccctcgccaagttcttccagctctgaacaacccagcgaagcacccagcagctcaccctcaccaagttatcccagttctgaacaaccaagcgaagcaccaagcagctctgcctcgcctagttcttccagctctggacaaccaagcgaagcaccaagcagctctgcctcgccaagttcgtccagctctgaacaacccagtgaagccccaagcagctctgcctcgccaagttcttccagctctgaacaacccagtgaagcacccagcagctctgcttcaccaagttcttccagctctggacaaccaagcgaacctccaagcagctctgcctcgccaagttcttccagctctgaacaacccagtgaagccccaagcagctctgcctcacctagttcttcaagttctgaacaacccagccaagcaccgagcagttcggcatcaccaagttctgaatctactccttgtgaggaatatagcgtagatccaagcagctctgcctcgccaagttcttccagctctgaacaacccagtgaagcacccagcagctctgcttcaccaagttcttccagctctggacaaccaagcgaacctccaagcagctccgcctcgcctagttcttccagttctgaacaaccaagcgaagctccaagcagctctgcctcgccaagttcttccagctctgaacaacccagtgaagcacccagcagctcggcctcaccaagttctcccagttctgaacaaccaagcgaagcaacgagcagttcggcatcaccaagttcttccagctctggacaaccaagtgaagcgccaagcagttctgcctcgcctagttcttccagttctgaacaaccaagcgaagctccaagcagttctgcctcgcctagttcttcaagttctgaacaacccagcgaagtaccgagcagttcgggatcaccaagttctgaatctactccttgtgaggaatatagcgtagctccaagcagctctgcctcgccaagttcttccagctctgaacaaccaagcgaagccccaagcagctctgcctcaccaagctcttccagttctgaacaacccagtgaagcacccagcagctctgcttcaccaagttcttccaactctggacaaccaagcgaacctccaagcagctctgcctcgcctagttcttccagttctgaacaaccaagcgaagctccaagcagctctgcctcgccaagttcttccagctctggacaaccaagcgaacctccaagcagctccgcctcgcctagttcttccagttctgaacaaccaagcgaagctccaagcagctctgcctcgccaagttcttccagctctgaacaacccagtgaagcacccagcagctcggcctcaccaagttctcccagttctgaacaaccaagcgaagcaacgagcagttcggcatcaccaagttcttccagctctggacaaccaagtgaagcgccaagcagttctgcctcgcctagttcttccagttctgaacaaccaagcgaagctccaagcagttctgcctcgcctagttcttcaagttctgaacaacccagcgaagcaccgagcagttcgggatcaccaagttctgaatctactccttgtgaggaatatagcgtagctccaagcagctctgtctcgccaagttcttctagctctgaacaaccaagcgaagccccaagcagctctgcctcaccaagctcttccagttctgaacaacccagtgaagcacccagcagctctgcttcaccaagttcttccagctctggacaaccaagcgaacctccaagcagctctgcctcgcctagttcttccagttctgaacaaccaagcgaagctccaagcagctctgcctcgccaagttcttccagctctgaacaacccagtgaagcacccagcagctcggcctcaccaagttctcccagttctgaacaaccaagcgaagcaccgagcagttcggcatcaccaagttcttccagctctggacaaccaagtgaagatccaagcagctctgcctcgcctagttcttccagttctgaacaaccaagcgaagctccaagcagttctgcctcgccaaattcttcaagttctgaacaacccagcgaagcaccgagcagttcgggatcaccaagttctgaatctactccttgtgaggaatatagcgtagctccaagcagctctgcctcgccaagttcttctagctctgaacaacccagtgaagcacccagcagctctgcctcgccaagttcttctagctctgaacaacccagtgaagcacccagcagctcggcctcaccaagttctcccagttctgaacaacccagtgaagcaccgagcagttcggcatcaccaagttcttccagctctggtcaaccaagcgaagcgccaagcagctctgcctcaccaagttcttctagctctggacaaccaagtgaagctccaagcagctctgcctcgcctagttcttccagctctggtcaaccaagcgaagcgccaagcagctctgcctcaccaagttcttctagctctggacaacccagtgaagcacccagcagctcggcctcaccaagttctcccagttctgaacaacccagtgaagcaccgagcagttcggcatcaccaagttcttccagctctggtcaaccaagcgaagcgccaagcagctctgcctcaccaagttcttctagctctggacaaccaagtgaagctccaagcagctctgcctcgcctagttcttccagctctggtcaaccaagcgaagcgccaagcagctctgcctcacctagttcttctagctctggacaaccaagtgaagctccaagcagctctgcctcgcctagttcttccagttctgaacaaccaagcgaagccccaagcagctctgcctcaccaagctcttccagctctgaacaacccagtgaagcaccgagcagttcggcatcaccaagttcttccagctctggtcaaccaagcgaagcgccaagcagctctgcctcacctagttcttcaagttctgaacaacccagcgaagcaccgagcagttcgggatcaccaagttctgaatctactccttgtgaggaatatagcgtagctccaagcagctctgcctcgccaagttcttccagctctgaacaaccaagcgaagccccaagcagctctgcctcaccaagctcttccagctctgaacaacccagtgaagcacccagcagctctgcttcaccaagttcttccagctctggacaaccaagcgaacctccaagcagctctgcctcgcctagttcttctagttctgaacaaccaagcgaagctccaagcagctctgcctcgccaagttcttccagctctgaacaacccagtgaagcacccagcagctcggcctcaccaagttctcccagttctgaacaaccaagcgaagcaccgagcagttcggcatcaccaagttcttccagctctgaacaaccaagcgaagcaccaagcagctctgcctcaccaagttcttctagctctggtcaaccaagcgaagcgccaagcagctctgcctcaccaagttcttctagctctggacaaccaagtgaagccccaagcagctctgcctcgcctagttcttccagttctgaacaaccaagcgaagccccaagcagctctgcctcaccaagctcttccagctctgaacaacccagtgaagcaccgagcagttcggcatcaccaagttcttccaactctggtcaaccaagcgaagcgccaagcagctctgcctcacctagttcttcaagttctgaacaacccagcgaagcaccgagcagttcgggatcaccaagttctgaatctactccttgtgaggaatatagcgtagctccaagcagctctgcctcgccaagttcttccagctctgaacaaccaagcgaagccccaagcagctctgcctcaccaagctcttccagctctgaacaacccagtgaagcacccagcagctctgcttcaccaagttcttccagctctggacaaccaagcgaagctccaagcagctctgcctcgcctagttcttccagttctgaacaaccaagcgaagctccaagcagctctacctcgccaagttcttccagctctgaacaacccagtgaagcacccagcagctcggcctcaccaagttctcccagttctgaacaaccaagcgaagcaccgagcagttcagcatcaccaagttcttccagctctgaacaaccaagcgaagcaccaagcagctctgcctcaccaagttcttctagctctggacaaccaagtgaagctccaagcagctctgcctcgcctagttcttccagttctgaacaaccaagcgaagctccaagcagttctgcctcgcctagttcttcaagttctgaacaatccagcgaagcaccgagcagttcgggatcaccaagttctgaatctactccttgtgaggaatatagcgtagctccaagcagctctgcctcgccaagttcttccagctctgaacaaccaagcgaagccccaagcagctctgcctcaccaagctcttccagctctgaacaacccagtgaagcacccagcagctctgcttcaccaagttcttccagctctggacaaccaagcgaagctccaagcagctctgcctcaccaagttctcccagttctgaacaaccaagcgaagcaccaagcagctctgcctcgcctagttcttccagttctgaacaaccaagcgaagctccaagcagctctgcctcgccaagttcttccagctctgaacaaccaagcgaagctccaagcagctctgcctcgccaagttcttccagctctgaacaatccagtgaagccccaagcagctctgcctcgcctagttcttccagttctgaacaaccaagcgaagctccaagcagctctgcctcgcctagttcttccagttctgaacaaccaagcgaagctccaagcagctctgcctcgcctagttcttccagttctgaacaaccaagcgaagctccaagcagttctgcctcacctagttcttccagttctgaacaaccaagcgaagctccaagcagttctgcctcgcctagttcttcaagttcaggagaacccagcgaagcaccgagcagttcggcctctccaagttctgaaagtacaccttgtgaagaatctagcgtagcatcgagcagttctgcctcgcctagttcttccagttctatccatccaagcggcggaccgagtagctctttgccaagttctggttcaaccccttggatcagttcgacccgttttcctcaccactttactgattcagtcggtcgacagtgctattgttactgatttttaaaattacttaaaattttttaattcggctcagttattttaaaacgtcaacaattttactatatctttctgaaacataattactaaacatagactaaatttgtaattggcattttctgtaaattgaatcaaactgttattttaattgaataaattattttatgaaaata
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]