2024-11-15 16:35:51, GGRNA.v2 : RefSeq release 226 (Sep, 2024)
LOCUS XM_046959598 7230 bp mRNA linear INV 01-MAR-2022 DEFINITION PREDICTED: Vespa crabro mucin-19-like (LOC124422741), mRNA. ACCESSION XM_046959598 VERSION XM_046959598.1 DBLINK BioProject: PRJNA809765 KEYWORDS RefSeq. SOURCE Vespa crabro (European hornet) ORGANISM Vespa crabro Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Vespoidea; Vespidae; Vespinae; Vespa. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_060957) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Vespa crabro Annotation Release 100 Annotation Version :: 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 9.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7230 /organism="Vespa crabro" /mol_type="mRNA" /db_xref="taxon:7445" /chromosome="3" gene 1..7230 /gene="LOC124422741" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 114 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns" /db_xref="GeneID:124422741" CDS 53..7057 /gene="LOC124422741" /codon_start=1 /product="mucin-19-like" /protein_id="XP_046815554.1" /db_xref="GeneID:124422741" /translation="
MKVSATSLLFIVVSTTALSIPAGNRQSQEIGSISNPINNVRASQGINAGINAGINANAKVGSKTGVNSNINAGNRQGQGIGSISNSINNIRASQGINAGINAGINAGINAGINAGINAGINANAKGGSKTGANFNINAGVQAQSKGKSNVGANLGIHAGLGQQWNIPSYSKHSGHNNDNYNNKGYSYYFPRIIEFPKIPKLPHIPLPFPLWSTKTTTTTTEKPCDESSMTTTTAKPTKAPTSKPSPSTKSTSTTKKSSEAPSSSASPSSEKIPCEESSAAPSSSAHPSSTSSKKPSEAPSSSASPSSSSSEKPSEATNSSASQSSETTPCEESSVTPSSSAVPSSSNSEKPSEAPSSSVSPSSSSSEQPSEAPSSSVPPSSSSSEQPSEATSSSVSTSSPSSEQPSEAPSSSPSPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSESTPCEESSVAPSSSPSPSSSSSEQPSEAPSSSASPSSPSSEQPSEPPSSSASPSSSSSGQPSEAPSSSASPSSSSSEQPSQAPSSSASPSSESTPCEESSVAPSSSPSPSSSSSEQPSEAPSSSPSPSYPSSEQPSEAPSSSASPSSSSSGQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSGQPSEPPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSQAPSSSASPSSESTPCEEYSVDPSSSASPSSSSSEQPSEAPSSSASPSSSSSGQPSEPPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSPSSEQPSEATSSSASPSSSSSGQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEVPSSSGSPSSESTPCEEYSVAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSNSGQPSEPPSSSASPSSSSSEQPSEAPSSSASPSSSSSGQPSEPPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSPSSEQPSEATSSSASPSSSSSGQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSGSPSSESTPCEEYSVAPSSSVSPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSGQPSEPPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSPSSEQPSEAPSSSASPSSSSSGQPSEDPSSSASPSSSSSEQPSEAPSSSASPNSSSSEQPSEAPSSSGSPSSESTPCEEYSVAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSPSSEQPSEAPSSSASPSSSSSGQPSEAPSSSASPSSSSSGQPSEAPSSSASPSSSSSGQPSEAPSSSASPSSSSSGQPSEAPSSSASPSSPSSEQPSEAPSSSASPSSSSSGQPSEAPSSSASPSSSSSGQPSEAPSSSASPSSSSSGQPSEAPSSSASPSSSSSGQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSGQPSEAPSSSASPSSSSSEQPSEAPSSSGSPSSESTPCEEYSVAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSGQPSEPPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSPSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSGQPSEAPSSSASPSSSSSGQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSNSGQPSEAPSSSASPSSSSSEQPSEAPSSSGSPSSESTPCEEYSVAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSGQPSEAPSSSASPSSSSSEQPSEAPSSSTSPSSSSSEQPSEAPSSSASPSSPSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSGQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQSSEAPSSSGSPSSESTPCEEYSVAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSGQPSEAPSSSASPSSPSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQSSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSEQPSEAPSSSASPSSSSSGEPSEAPSSSASPSSESTPCEESSVASSSSASPSSSSSIHPSGGPSSSLPSSGSTPWISSTRFPHHFTDSVGRQCYCY"
misc_feature <167..>538 /gene="LOC124422741" /note="serine-rich protein; Region: ser_rich_anae_1; NF033849" /db_xref="CDD:468206" polyA_site 7230 /gene="LOC124422741" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN
taccatgcttgaatcctcaaaattttgaaagtggaataggaagcaagcgatcatgaaggtatccgcgacctctctactcttcattgtggtttctaccacggccctctcgataccagcaggtaatcgacagagtcaagaaataggatcaatatcaaatccaataaacaatgtcagagctagccaaggaataaatgcaggaataaatgcaggaataaatgcaaatgcaaaagtaggatcaaaaacaggagttaattccaatataaatgcaggtaatcgacagggtcaaggaataggatcaatatcaaattcaataaacaatatcagagctagccaaggaataaatgcaggaataaatgcaggaataaatgcaggaataaatgcaggaataaatgcaggaataaatgcaggaataaatgcaaatgcgaagggaggatcaaaaacaggagctaatttcaatataaatgcaggagtacaagcacaatcgaaaggaaaatcaaatgtaggagctaatttaggtatacatgcaggattaggtcaacaatggaatattccgtcttattccaaacattctggacataataatgataattataataataagggttattcatattactttcctcgaataatcgaatttcctaaaatacctaaacttcctcatatacccttacctttccccctttggtctacgaaaactacaaccactacaactgaaaaaccatgcgacgaatcaagtatgactactactactgcaaaaccaacaaaagcaccaacgagtaaaccatcaccaagtactaaatctacttcaaccactaaaaaatcaagtgaagcaccgagcagttcggcgtcaccaagttctgaaaaaattccttgcgaagaatctagcgcagcaccaagcagctctgcccacccaagttctacgagctcaaaaaaaccaagtgaagcaccgagcagttctgcctcgccaagttcgtccagttctgaaaaacccagcgaagcaacaaacagttcggcatcacaaagttctgaaactactccatgtgaagaatctagcgtaacacctagcagctctgcagttccaagttcgtccaattctgaaaaacccagtgaagccccgagcagctctgtttcaccaagttcttccagctctgaacaacccagcgaagccccaagcagctctgtcccgcctagttcttccagttctgaacaacccagtgaagcaaccagcagctcggtctcaacaagttctcccagttctgaacaaccaagcgaagcacccagcagctctccctcgccaagttcttccagctctgaacaacccagtgaagccccaagcagctctgcctcacctagttcttcaagttctgaacaaccaagcgaagcaccgagcagttcggcatcaccaagttctgaatctactccttgtgaagaatctagcgtagcacccagcagctctccctcgccaagttcttccagctctgaacaacccagcgaagcacccagcagctcggcctcaccaagttctcccagttctgaacaaccaagcgaacctccaagcagttcggcatcaccaagttcttccagctctggacaaccaagcgaagcgccaagcagctctgcctcacctagttcttcaagttctgaacaacccagccaagcaccgagcagttcggcatcaccaagttctgaatctacaccttgtgaagaatctagcgtagcacccagcagctctccctcgccaagttcttccagctctgaacaacccagcgaagcacccagcagctcaccctcaccaagttatcccagttctgaacaaccaagcgaagcaccaagcagctctgcctcgcctagttcttccagctctggacaaccaagcgaagcaccaagcagctctgcctcgccaagttcgtccagctctgaacaacccagtgaagccccaagcagctctgcctcgccaagttcttccagctctgaacaacccagtgaagcacccagcagctctgcttcaccaagttcttccagctctggacaaccaagcgaacctccaagcagctctgcctcgccaagttcttccagctctgaacaacccagtgaagccccaagcagctctgcctcacctagttcttcaagttctgaacaacccagccaagcaccgagcagttcggcatcaccaagttctgaatctactccttgtgaggaatatagcgtagatccaagcagctctgcctcgccaagttcttccagctctgaacaacccagtgaagcacccagcagctctgcttcaccaagttcttccagctctggacaaccaagcgaacctccaagcagctccgcctcgcctagttcttccagttctgaacaaccaagcgaagctccaagcagctctgcctcgccaagttcttccagctctgaacaacccagtgaagcacccagcagctcggcctcaccaagttctcccagttctgaacaaccaagcgaagcaacgagcagttcggcatcaccaagttcttccagctctggacaaccaagtgaagcgccaagcagttctgcctcgcctagttcttccagttctgaacaaccaagcgaagctccaagcagttctgcctcgcctagttcttcaagttctgaacaacccagcgaagtaccgagcagttcgggatcaccaagttctgaatctactccttgtgaggaatatagcgtagctccaagcagctctgcctcgccaagttcttccagctctgaacaaccaagcgaagccccaagcagctctgcctcaccaagctcttccagttctgaacaacccagtgaagcacccagcagctctgcttcaccaagttcttccaactctggacaaccaagcgaacctccaagcagctctgcctcgcctagttcttccagttctgaacaaccaagcgaagctccaagcagctctgcctcgccaagttcttccagctctggacaaccaagcgaacctccaagcagctccgcctcgcctagttcttccagttctgaacaaccaagcgaagctccaagcagctctgcctcgccaagttcttccagctctgaacaacccagtgaagcacccagcagctcggcctcaccaagttctcccagttctgaacaaccaagcgaagcaacgagcagttcggcatcaccaagttcttccagctctggacaaccaagtgaagcgccaagcagttctgcctcgcctagttcttccagttctgaacaaccaagcgaagctccaagcagttctgcctcgcctagttcttcaagttctgaacaacccagcgaagcaccgagcagttcgggatcaccaagttctgaatctactccttgtgaggaatatagcgtagctccaagcagctctgtctcgccaagttcttctagctctgaacaaccaagcgaagccccaagcagctctgcctcaccaagctcttccagttctgaacaacccagtgaagcacccagcagctctgcttcaccaagttcttccagctctggacaaccaagcgaacctccaagcagctctgcctcgcctagttcttccagttctgaacaaccaagcgaagctccaagcagctctgcctcgccaagttcttccagctctgaacaacccagtgaagcacccagcagctcggcctcaccaagttctcccagttctgaacaaccaagcgaagcaccgagcagttcggcatcaccaagttcttccagctctggacaaccaagtgaagatccaagcagctctgcctcgcctagttcttccagttctgaacaaccaagcgaagctccaagcagttctgcctcgccaaattcttcaagttctgaacaacccagcgaagcaccgagcagttcgggatcaccaagttctgaatctactccttgtgaggaatatagcgtagctccaagcagctctgcctcgccaagttcttctagctctgaacaacccagtgaagcacccagcagctctgcctcgccaagttcttctagctctgaacaacccagtgaagcacccagcagctcggcctcaccaagttctcccagttctgaacaacccagtgaagcaccgagcagttcggcatcaccaagttcttccagctctggtcaaccaagcgaagcgccaagcagctctgcctcaccaagttcttctagctctggacaaccaagtgaagctccaagcagctctgcctcgcctagttcttccagctctggtcaaccaagcgaagcgccaagcagctctgcctcaccaagttcttctagctctggacaacccagtgaagcacccagcagctcggcctcaccaagttctcccagttctgaacaacccagtgaagcaccgagcagttcggcatcaccaagttcttccagctctggtcaaccaagcgaagcgccaagcagctctgcctcaccaagttcttctagctctggacaaccaagtgaagctccaagcagctctgcctcgcctagttcttccagctctggtcaaccaagcgaagcgccaagcagctctgcctcacctagttcttctagctctggacaaccaagtgaagctccaagcagctctgcctcgcctagttcttccagttctgaacaaccaagcgaagccccaagcagctctgcctcaccaagctcttccagctctgaacaacccagtgaagcaccgagcagttcggcatcaccaagttcttccagctctggtcaaccaagcgaagcgccaagcagctctgcctcacctagttcttcaagttctgaacaacccagcgaagcaccgagcagttcgggatcaccaagttctgaatctactccttgtgaggaatatagcgtagctccaagcagctctgcctcgccaagttcttccagctctgaacaaccaagcgaagccccaagcagctctgcctcaccaagctcttccagctctgaacaacccagtgaagcacccagcagctctgcttcaccaagttcttccagctctggacaaccaagcgaacctccaagcagctctgcctcgcctagttcttctagttctgaacaaccaagcgaagctccaagcagctctgcctcgccaagttcttccagctctgaacaacccagtgaagcacccagcagctcggcctcaccaagttctcccagttctgaacaaccaagcgaagcaccgagcagttcggcatcaccaagttcttccagctctgaacaaccaagcgaagcaccaagcagctctgcctcaccaagttcttctagctctggtcaaccaagcgaagcgccaagcagctctgcctcaccaagttcttctagctctggacaaccaagtgaagccccaagcagctctgcctcgcctagttcttccagttctgaacaaccaagcgaagccccaagcagctctgcctcaccaagctcttccagctctgaacaacccagtgaagcaccgagcagttcggcatcaccaagttcttccaactctggtcaaccaagcgaagcgccaagcagctctgcctcacctagttcttcaagttctgaacaacccagcgaagcaccgagcagttcgggatcaccaagttctgaatctactccttgtgaggaatatagcgtagctccaagcagctctgcctcgccaagttcttccagctctgaacaaccaagcgaagccccaagcagctctgcctcaccaagctcttccagctctgaacaacccagtgaagcacccagcagctctgcttcaccaagttcttccagctctggacaaccaagcgaagctccaagcagctctgcctcgcctagttcttccagttctgaacaaccaagcgaagctccaagcagctctacctcgccaagttcttccagctctgaacaacccagtgaagcacccagcagctcggcctcaccaagttctcccagttctgaacaaccaagcgaagcaccgagcagttcagcatcaccaagttcttccagctctgaacaaccaagcgaagcaccaagcagctctgcctcaccaagttcttctagctctggacaaccaagtgaagctccaagcagctctgcctcgcctagttcttccagttctgaacaaccaagcgaagctccaagcagttctgcctcgcctagttcttcaagttctgaacaatccagcgaagcaccgagcagttcgggatcaccaagttctgaatctactccttgtgaggaatatagcgtagctccaagcagctctgcctcgccaagttcttccagctctgaacaaccaagcgaagccccaagcagctctgcctcaccaagctcttccagctctgaacaacccagtgaagcacccagcagctctgcttcaccaagttcttccagctctggacaaccaagcgaagctccaagcagctctgcctcaccaagttctcccagttctgaacaaccaagcgaagcaccaagcagctctgcctcgcctagttcttccagttctgaacaaccaagcgaagctccaagcagctctgcctcgccaagttcttccagctctgaacaaccaagcgaagctccaagcagctctgcctcgccaagttcttccagctctgaacaatccagtgaagccccaagcagctctgcctcgcctagttcttccagttctgaacaaccaagcgaagctccaagcagctctgcctcgcctagttcttccagttctgaacaaccaagcgaagctccaagcagctctgcctcgcctagttcttccagttctgaacaaccaagcgaagctccaagcagttctgcctcacctagttcttccagttctgaacaaccaagcgaagctccaagcagttctgcctcgcctagttcttcaagttcaggagaacccagcgaagcaccgagcagttcggcctctccaagttctgaaagtacaccttgtgaagaatctagcgtagcatcgagcagttctgcctcgcctagttcttccagttctatccatccaagcggcggaccgagtagctctttgccaagttctggttcaaccccttggatcagttcgacccgttttcctcaccactttactgattcagtcggtcgacagtgctattgttactgatttttaaaattacttaaaattttttaattcggctcagttattttaaaacgtcaacaattttactatatctttctgaaacataattactaaacatagactaaatttgtaattggcattttctgtaaattgaatcaaactgttattttaattgaataaattattttatgaaaata
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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