LOCUS       XM_046310283            3621 bp    mRNA    linear   VRT 05-MAR-2022
DEFINITION  PREDICTED: Oncorhynchus gorbuscha UF2 component of NDC80
            kinetochore complex (nuf2), transcript variant X1, mRNA.
ACCESSION   XM_046310283
VERSION     XM_046310283.1
DBLINK      BioProject: PRJNA726253
KEYWORDS    RefSeq.
SOURCE      Oncorhynchus gorbuscha (pink salmon)
  ORGANISM  Oncorhynchus gorbuscha
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii;
            Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_060190) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Oncorhynchus gorbuscha Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 9.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3621
                     /organism="Oncorhynchus gorbuscha"
                     /mol_type="mRNA"
                     /isolate="QuinsamMale2020"
                     /db_xref="taxon:8017"
                     /sex="male"
                     /tissue_type="Multiple"
                     /dev_stage="Spawning"
                     /ecotype="Even-year"
                     /collection_date="2020-07-28"
                     /collected_by="Quinsam River Hatchery"
                     /linkage_group="LG18"
     gene            1..3621
                     /gene="nuf2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 EST, 3 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 18 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:124002669"
     CDS             212..1576
                     /gene="nuf2"
                     /codon_start=1
                     /product="kinetochore protein Nuf2"
                     /protein_id="XP_046166239.1"
                     /db_xref="GeneID:124002669"
                     /translation="

MTENTFPVYKVDAIVTFFRTEVLTGQEAKHFTKNDLAPSPKPDAVQRLYMRILQLLYRFKPECHYMVPFSENIQHPQLHEWPTAVMSVYLRMRQFLRMCYVYDFSLNDLLAPKVKRTVTILSGIMNYLHFRKQRLDMTMGHQERFREDMDKLQAYSRGTKDAQKKMDKLTTIPPEQQAEARELDSALSDLQTNTMHQYQEVNAINENIAEWKSEMAEKSQKLTQLKVDVATLKENIGKLKSQIVESPEEMKIQMEKMKENVKNIKLAIEMADERLVGLQSNVQGVTHSEADIQLIFKLLQDLQSSMNKTQQHQEEAQALVCVYEAQQKELKNHGVEEGQLKRSLGMKMDKESKQHIRRQKKKEIKDQYIEDVLGQCDNVHQKREQIADQIQERDRDSQHLRSQMTNLRDTCSQETEKAQDLFDRLLAALDHFHKRIQNHVVEGNNDIVKMTANF"

     misc_feature    218..646
                     /gene="nuf2"
                     /note="Nuf2 family; Region: Nuf2; pfam03800"
                     /db_xref="CDD:461057"
     misc_feature    <593..>1438
                     /gene="nuf2"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; Region: SMC_prok_B; TIGR02168"
                     /db_xref="CDD:274008"
     polyA_site      3621
                     /gene="nuf2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

aagaagataaactacagaaatggccgtggtttatgactttgcgactgtttaaaccagtgacgaccccaaaccatgcggtggcgcaccaatcatcaaccggagaattcgaaaaacacggaagttacctcgaaagcgccaaaaatcgaaacaccagacgtgaaatagttagctacttgtttgctctgtagtcaacaacacaatatcaggaacaatgacggagaacactttccccgtgtataaagtggacgccatcgtaacctttttccgcactgaggtccttaccgggcaggaggcaaaacatttcactaagaacgaccttgccccgagcccaaagccggatgcagtacagagactgtacatgagaatactgcaactcctgtaccgcttcaagcctgagtgtcattacatggtcccattctctgaaaacatccagcacccccagctccatgagtggcccactgctgtcatgagtgtctacctgaggatgcgtcagttcctgcggatgtgctatgtgtatgacttctcactgaacgacctgctggctcccaaggtgaagaggacggtgaccatcctgagtggcatcatgaactaccttcacttcaggaagcagaggcttgatatgactatgggacaccaggagagatttagagaagacatggacaagcttcaggcttactcacgaggaactaaagacgctcagaagaaaatggacaagctgactaccatccctccagagcagcaggctgaagcgagggaattggactctgctctgtctgacctgcagaccaacaccatgcaccaataccaggaagtgaatgccatcaatgagaatattgcagagtggaaatcggagatggcagagaagtcccaaaaattgacccagttgaaggttgatgtggccactctaaaggagaacattggtaagctaaagtctcagatcgttgagtctcctgaagagatgaagattcagatggagaagatgaaggaaaacgtgaagaacatcaagctggccatcgagatggcagacgagcgtctggtagggctgcagagtaatgtccagggtgtgactcacagcgaggctgacatccagctgatattcaaactactgcaggacctccagagctccatgaacaagacccaacagcaccaggaagaggcccaggctctggtgtgtgtgtatgaggcacagcagaaggaactgaagaaccatggtgtggaggagggccagctgaagagatctttagggatgaagatggacaaggagtccaaacaacatatacgaagacagaagaagaaggagattaaggatcaatacattgaggatgtactaggtcagtgtgacaatgttcaccagaagagggagcagatagcggaccagatccaggagagagacagggattctcaacacctccgcagtcagatgaccaacctgagggacacctgcagtcaggagactgagaaagctcaggacctgtttgatcgtctgctggcagctctggatcacttccataaacgcatacagaaccacgtcgtcgagggcaacaacgacatcgtcaagatgactgctaacttctaacccagtgtagttgacttctctacatctgtcattagtttagctcagctctgctaacttctaacccagtgtagttgacttctctacatctgtcattagtttagctcagctctgctaacttctaacccagtgtagttgacttctctacatctgtcattagtttagctcagctctgctaacttctaacccagtgtagttgacttctccacatctgtcattagtttagctcagctctgctaacttctaacccagtgtagttgacttctccacatctgtcattagcttagctctgctaacttctaacccagtgtagttgacttctctacatctgtcattagtttagctctgctaacttctaacccagtgtagttgactcctctacatctgtcattagtttagctctgctaacttctaacccagtgtagttgacttctccacatctgtcattagtttagctcagctctgctaacttctaacccagtgtagttgacttctctacatctgtcattagtttagctcagctctgctaacttctaacccagtgtagttgacttctctacatctgtcattagtttagctcagctctgctaacttctaacccagtgtagttgacttctctacatctgtcattagtttagctcagctctgctaacttctaacccagtgtagttgacttctccacatctgtcattagcttagctctgctaacttctaacccagtgtagttgacttctccacatctgtcattagtttagctctgctaacttctaacccagtgtagttgacttctctacatctgtcattagtttagctcagctctgctaacttctaacccagtgtagttgacttctccacatctgtcattagcttagctctgctaacttctaacccagtgtagttgacttctccacatctgtcattagcttagctctgctaacttctaacccagtgtagttgacttctccacatctgtcattagtttagctctgctaacttctaacccagtgtagttgacttctctacatctgtcattagtttagctcagctctgctaacttctaacccagtgtagttgacttctctacatctgtcattagtttagctcagctctgctaacttctaacccagtgtagttgactcctctacatctgtcattagtttagctctgctaacttctaacccagtgtagttgacttctccacatctgtcattagtttagctcagctctgctaacttctaacccagtgtagttgacttctctacatctgtcattagtttagctcagctctgctaacttctaacccagtgtagttgacttctctacatctgtcattagtttagctcagctctgctaacttctaacccagtgtagttgacttctccacatctgtcattagtttagctcagctctgctaacttctaacccagtgtagttgacttctctacatctgtcattagtttagctcagctctgctaacttctaacccagtgtagttgacttctctacatctgtcattagtttagctcagctctgctaacttctaacccagtgtagttgacttctccacatctgtcattagtttagctcagctctgctaacttctaacccagtgtagttgacttctccacatctgtcattagtttagctcagctctgctaacttctaacccagtgtagttgacttctctacatctgtcattagtttagctcagctctgctaacttctaacccagtgtagttgacttctctacatctgtcattagtttagctcagctctgctaacttctaacccagtgtagttgacttctccacatctgtcattagtttagctctgctaacttctaacccagtgtagttgacttctctacatctgtcattagtttagctcagctctgctaacttctaacccagtgtagttgacttctccacatctgtcattagtttagctctgctaacttctaacccagtgtagttgactcctctccatgtcttattttgaaaacatacaaacatgcaacttttatttgtgaataaaaatatctattctca

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