2024-11-15 19:20:35, GGRNA.v2 : RefSeq release 226 (Sep, 2024)
LOCUS XM_033826478 528 bp mRNA linear PLN 27-APR-2020 DEFINITION Trematosphaeria pertusa uncharacterized protein (BU26DRAFT_500137), partial mRNA. ACCESSION XM_033826478 VERSION XM_033826478.1 DBLINK BioProject: PRJNA625778 BioSample: SAMN05660896 KEYWORDS RefSeq. SOURCE Trematosphaeria pertusa ORGANISM Trematosphaeria pertusa Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Massarineae; Trematosphaeriaceae; Trematosphaeria. REFERENCE 1 (bases 1 to 528) AUTHORS Haridas,S., Albert,R., Binder,M., Bloem,J., Labutti,K., Salamov,A., Andreopoulos,B., Baker,S., Barry,K., Bills,G., Bluhm,B., Cannon,C., Castanera,R., Culley,D., Daum,C., Ezra,D., Gonzalez,J., Henrissat,B., Kuo,A., Liang,C., Lipzen,A., Lutzoni,F., Magnuson,J., Mondo,S., Nolan,M., Ohm,R., Pangilinan,J., Park,H.-J., Ramirez,L., Alfaro,M., Sun,H., Tritt,A., Yoshinaga,Y., Zwiers,L.-H., Turgeon,B., Goodwin,S., Spatafora,J., Crous,P. and Grigoriev,I. TITLE 101 Dothideomycetes genomes: a test case for predicting lifestyles and emergence of pathogens JOURNAL Stud. Mycol. (2020) In press REMARK DOI: 10.1016/j.simyco.2020.01.003 REFERENCE 2 (bases 1 to 528) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (23-APR-2020) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 528) AUTHORS Haridas,S., Albert,R., Binder,M., Bloem,J., Labutti,K., Salamov,A., Andreopoulos,B., Baker,S.E., Barry,K., Bills,G., Bluhm,B.H., Cannon,C., Castanera,R., Culley,D.E., Daum,C., Ezra,D., Gonzalez,J.B., Henrissat,B., Kuo,A., Liang,C., Lipzen,A., Lutzoni,F., Magnuson,J., Mondo,S., Nolan,M., Ohm,R., Pangilinan,J., Park,H.-J., Ramirez,L., Alfaro,M., Sun,H., Tritt,A., Yoshinaga,Y., Zwiers,L.-H., Turgeon,B.G., Goodwin,S.B., Spatafora,J.W., Crous,P.W. and Grigoriev,I.V. CONSRTM DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (27-JAN-2020) DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_022987213). ##Metadata-START## Organism Display Name :: Trematosphaeria pertusa CBS 122368 GOLD Stamp ID :: Gp0036292 ##Metadata-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..528 /organism="Trematosphaeria pertusa" /mol_type="mRNA" /strain="CBS 122368" /culture_collection="CBS:122368" /type_material="culture from epitype of Trematosphaeria pertusa" /db_xref="taxon:390896" /chromosome="Unknown" gene <1..>528 /locus_tag="BU26DRAFT_500137" /db_xref="GeneID:54579808" CDS 1..528 /locus_tag="BU26DRAFT_500137" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_033689370.1" /db_xref="GeneID:54579808" /db_xref="JGIDB:Trepe1_500137" /translation="
MTDTADFEQFCLTTLYNAIPMLDNPSDRYEWNNRVCDFIEISSVAEDGAPPPNKDQAKEWYRRQKLYTAMIMKKLSHNAAPRIKALGISDVQSLLEAVRERFNFSRLKDEAIEEEYRSGQRGNEPAKAQRVSNQIQTLTRQILISPDETRCQIHIDKVPFCSFCPTKLAQQPRNI"
ORIGIN
atgaccgacaccgcggactttgagcaattttgcttaactacactctacaatgctattccgatgctcgacaaccccagcgaccggtacgagtggaataatagggtgtgcgattttattgagatttcctctgtcgccgaagatggtgctcctccaccaaacaaagatcaggcaaaggaatggtatcgccgacagaaactctacacagccatgatcatgaagaagctgtcgcacaacgctgcgccgcgaattaaggccttagggatcagtgacgtgcaatctcttcttgaagctgtgcgagagcgcttcaactttagccgcctcaaggacgaggcaatcgaggaagagtaccgatccggccagcggggcaatgagccggcgaaggcgcagcgtgttagcaaccagattcaaactcttacccgccagatattgatatcaccggacgaaaccagatgccagattcacatagacaaggttccgttttgctcattttgtcccaccaaactcgcacagcaacccagaaacatttag
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@meso_cacase at
DBCLS
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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