LOCUS       XM_023962809            2247 bp    mRNA    linear   VRT 15-FEB-2018
DEFINITION  PREDICTED: Oryzias latipes mucin-5AC-like (LOC105358587), mRNA.
ACCESSION   XM_023962809
VERSION     XM_023962809.1
DBLINK      BioProject: PRJNA183868
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Oryzias latipes (Japanese medaka)
  ORGANISM  Oryzias latipes
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes;
            Adrianichthyidae; Oryziinae; Oryzias.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_019872.2) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Oryzias latipes Annotation Release
                                           103
            Annotation Version          :: 103
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 23% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2247
                     /organism="Oryzias latipes"
                     /mol_type="mRNA"
                     /db_xref="taxon:8090"
                     /chromosome="14"
     gene            1..2247
                     /gene="LOC105358587"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 3 Proteins, and 66% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:105358587"
     CDS             1..2247
                     /gene="LOC105358587"
                     /codon_start=1
                     /product="mucin-5AC-like"
                     /protein_id="XP_023818577.1"
                     /db_xref="GeneID:105358587"
                     /translation="

MCITASITASSPGASGTQVYKDCAAPSLCPTAGTATFSVNLGYSSAIASAQCCDSDNCNSQTLAFPTPQSANGLTCLVCDPTTSQCSSTVPCSGDQTSCFQATLTNGSTTYPALGCTSPNTCAVAANLGNLPFMQNTSTASTTVAETTSTSSTSSAPTVVAETTSTSSEPTRSAPTTVAETTSTSSAPTTVAETTSTSSEPTTVAETTSTSSASTTIAEATSTSSAPTTVAVTNLTSSAPTTVAETTSTIAETTSTSSASTTVAEKTSTSSAPTTVAETTSTKSAPATVAETTSTSLAPTTVTETTSTSSEPRTVAETTSTRSESTTVAEKTSTSSPPTTVAETTATSSAPTVVAETTSTSSEPTRLLKEVPQPLLLRPTTIAETTSTSSAPTTVAETTSTSSEPITVAATTLTSSASTAVADTTTTSAEPTTVAETTSTSPASTTVAETTSTSPASTTVAETTSTSSASTTVAEKTSTSSALTTVAEKTSTSSAPTTVAETTSTKSAPATVAETTSTSLAPTTVTETTSTSSEPRTVAETTSTRSESTTVAEKTSTSSTPTAVAETTSTSSTSTTVAETISTRSAPTTVAETTSTSSAPTTVAETTSSSAKHTTVAATTLTSSASTTVAETTSTSSEPTTVAETTSTSSEPTTVAETTSTSSAPTTVAETTSSSAKHTTVAATTLTSSASTTVAETTSTSSEPTTVAATTLTSSASTTVAEITSTSSAPTTVAETTSTSSLCTCNSC"

     misc_feature    <4..186
                     /gene="LOC105358587"
                     /note="three-fingered protein (TFP) fold found in Ly6/uPAR
                     (LU) and snake toxin superfamily; Region: TFP; cl45932"
                     /db_xref="CDD:480272"
     misc_feature    220..>327
                     /gene="LOC105358587"
                     /note="three-fingered protein (TFP) fold found in Ly6/uPAR
                     (LU) and snake toxin superfamily; Region: TFP; cl45932"
                     /db_xref="CDD:480272"
     misc_feature    <1009..1557
                     /gene="LOC105358587"
                     /note="ribonuclease E; Reviewed; Region: rne; PRK10811"
                     /db_xref="CDD:236766"
ORIGIN      

atgtgtataaccgcttccatcacagcctcttcacctggagcttcaggaacacaggtctacaaggactgtgctgctccttctctttgtcccacggctggaacggcaacgttttccgtcaacttgggttattccagtgccattgcatcggctcagtgctgcgactccgacaactgcaactcccagacgttggcctttcctacccctcagtctgctaacggcctgacgtgtctcgtctgtgacccgaccacctctcagtgcagctctacagttccgtgttctggagaccagaccagctgcttccaagcaaccttgaccaacggctccacaacatatccagctctgggctgcacatctcctaacacatgtgcagttgcagccaacctgggaaacctgcctttcatgcagaacacaagcactgcttctacaacagttgctgaaacaacttccacaagctctacaagctctgctcctacggttgttgctgaaacaacttccacaagctctgaacctacaagatctgcacctacaacagttgctgaaacaacttccacaagctctgcacctacaacagttgctgaaacaacttccacaagctctgaacctacaacagttgctgaaacaacttccacaagctctgcatctacaacaattgctgaagcaacttctacaagctctgcacctacaacagttgctgtgacaaatttgacaagctctgcacctacaacagttgctgaaacaacttctacaattgctgaaacaacttctacaagctcggcatctacaacagttgctgaaaaaacttctacaagctctgctcctacaacagttgctgaaacaacttctacaaaatctgcacctgcaacagttgctgaaacaacttccacaagcttggctcctacaacagtaactgagacaacttccacaagctctgaacctagaacagttgctgaaacaacttctacaaggtctgaatctacaacagttgctgaaaaaacttctacaagctctcctccaacaacagttgctgaaacaaccgccacaagctctgctcctacggttgttgctgaaacaacttccacaagctctgaacctacaagattgctgaaagaagttccacaacctctgctcctacgacctacaacaatagctgaaacaacttccacaagctctgctcctacaacagttgccgaaacaacttctacaagctctgaacctataaccgttgctgcaacaactttgacaagctctgcatctacagcagttgctgatacaactaccacaagtgctgaacctacaacagttgctgaaacaacttccacaagccctgcatctacaacagttgctgaaacaacttccacaagccctgcatctacaacagttgctgaaacaacttctacaagctcggcatctacaacagttgctgaaaaaacttctacaagctctgcacttacaacagttgctgaaaaaacttctacaagctctgctcctacaacagttgctgaaacaacttctacaaaatctgcacctgcaacagttgctgaaacaacttccacaagcttggctcctacaacagtaactgagacaacttccacaagctctgaacctagaacagttgctgaaacaacttctacaaggtctgaatctacaacagttgctgaaaaaacttctacaagctctacacctacagcagttgctgaaacaacttccacaagctccacatctacaacagttgctgagacaatttccacacgttctgcacctacaacagttgctgaaaccacttccacaagctctgcacctacaacagttgctgaaacaacatcttcaagtgctaaacatacaacagttgctgcaacaactttgactagctctgcatctacaacagttgctgaaacaacttctacaagctctgaacctacaacagtagctgaaacaacttccacaagctctgaacctacaacagttgctgaaacaacttccacaagctctgcacctacaacagttgctgaaacaacatcttcgagtgctaaacatacaacagttgctgcaacaactttgactagctctgcatctacaacagttgctgaaacaacttctacaagctctgaacctacaacagttgctgcaacaactttgacaagctctgcatctacaacagttgctgaaataacttctacaagttctgcacctacaacagttgctgaaacaacttccacaagctctctctgcacctgcaacagttgctga

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