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2024-11-15 16:52:21, GGRNA.v2 : RefSeq release 226 (Sep, 2024)

LOCUS       XM_021946624             783 bp    mRNA    linear   PLN 26-JUL-2017
DEFINITION  PREDICTED: Prunus avium acidic repeat-containing protein-like
            (LOC110746406), mRNA.
ACCESSION   XM_021946624
VERSION     XM_021946624.1
DBLINK      BioProject: PRJNA395588
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Prunus avium (sweet cherry)
  ORGANISM  Prunus avium
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae;
            Amygdaleae; Prunus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_018925563.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Prunus avium Annotation Release 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 7.4
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Prunus avium"
                     /mol_type="mRNA"
                     /cultivar="Satonishiki"
                     /db_xref="taxon:42229"
                     /chromosome="Unknown"
     gene            1..783
                     /gene="LOC110746406"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 Protein"
                     /db_xref="GeneID:110746406"
     CDS             1..783
                     /gene="LOC110746406"
                     /codon_start=1
                     /product="acidic repeat-containing protein-like"
                     /protein_id="XP_021802316.1"
                     /db_xref="GeneID:110746406"
                     /translation="
MRELPLVMKKLKRLSFAKSSTSRDGFGIGIVWGLDCLFGIRKSHPDPWGPIGCSGSGSSDDEIEPGSDSSDDNHEPGIGSSDDDNEPGSDSSDDNHEPGIGSSDDDNEPGSDSSDDNHEPGIGSSDDDNEPGSDSSDDNHEPGIGSSDDDNEPGSDSSDDNHEPGIGSSDDDNEPGSDSSDDNHEPGIGSSDDDNEPGSDSSDDNHEPGIGSSDDDNEPGSDSSDDNHEPGIGSSDDDNEPGSDSSDDNDEPISKRFKKV"
     misc_feature    <175..750
                     /gene="LOC110746406"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     Region: MSCRAMM_ClfA; NF033609"
                     /db_xref="CDD:468110"
ORIGIN      
atgagggagctgccgcttgttatgaaaaagctcaaacgtctaagctttgctaaatcatcaacttcaagggatggctttggcattggcattgtgtggggccttgactgtttatttggaattagaaagagtcatcctgacccctggggcccaattggttgtagtggaagtggtagctctgatgacgaaattgaaccaggaagtgatagctctgatgacaaccatgaacctggaattggtagctctgatgacgacaatgaaccaggaagtgatagctctgatgacaaccatgaacctggaattggtagctctgatgacgacaatgaaccaggaagtgatagctctgatgacaaccatgaacctggaattggtagctctgatgacgacaatgaaccaggaagtgatagctctgatgacaaccatgaacctggaattggtagctctgatgacgacaatgaaccaggaagtgatagctctgatgacaaccatgaacctggaattggtagctctgatgacgacaatgaaccaggaagtgatagctctgatgacaaccatgaacctggaattggtagctctgatgacgacaatgaaccaggaagtgatagctctgatgacaaccatgaacctggaattggtagctctgatgacgacaatgaaccaggaagtgatagctctgatgacaaccatgaacctggaattggtagctctgatgacgacaatgaaccaggaagtgatagctctgatgacaacgatgaaccaatcagcaaaagattcaagaaagtctaa
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]