LOCUS       XM_020915496            4995 bp    mRNA    linear   MAM 28-APR-2017
DEFINITION  PREDICTED: Odocoileus virginianus texanus testis and ovary specific
            PAZ domain containing 1 (TOPAZ1), transcript variant X1, mRNA.
ACCESSION   XM_020915496
VERSION     XM_020915496.1
DBLINK      BioProject: PRJNA384059
KEYWORDS    RefSeq.
SOURCE      Odocoileus virginianus texanus
  ORGANISM  Odocoileus virginianus texanus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Cervidae; Odocoileinae; Odocoileus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_018337220.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Odocoileus virginianus texanus
                                           Annotation Release 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 7.4
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4995
                     /organism="Odocoileus virginianus texanus"
                     /mol_type="mRNA"
                     /isolate="animal Pink-7"
                     /isolation_source="Collected from the wild"
                     /sub_species="texanus"
                     /db_xref="taxon:9880"
                     /chromosome="Unknown"
                     /sex="male"
                     /tissue_type="blood"
                     /collection_date="01-Apr-2013"
                     /collected_by="David Hewitt"
     gene            1..4995
                     /gene="TOPAZ1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 Proteins, and 97% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 2 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:110152015"
     CDS             1..4947
                     /gene="TOPAZ1"
                     /codon_start=1
                     /product="testis- and ovary-specific PAZ domain-containing
                     protein 1 isoform X1"
                     /protein_id="XP_020771155.1"
                     /db_xref="GeneID:110152015"
                     /translation="

MRRLPPSGPTTAPGREGDSRGLRKRSRRPGPGESGGCGPEAAGREESRQKRRMVARVSGREEVESDKSAKEKRKVTEASSDDPQPGIDLVRKESLTSSESFPTVECSEFQSMAFLQSLGKERLIEGIKRRIRIKKVKSLESPPLKMTENKATQNSKVEFQDELYKNTQKYSCNSLSPGVENNSILKLHDCGCLSHSKDCNDENNLAYKPDGGCLHVRENSSKKENPRSLIDKTNPSNIPQLLQTEENLMQVSQLLLEEDDSNLSKNNGMFSCLQSENNKHSVEESSIGRKYRKKMKVSEKGNGMVIEMKFSNMCNKSELMLQGNQTGAEGKETETLEAEKSSLKVLRKVNNNMLSPMDPLLSLPETGKKTSPKHYVNAVFQKALEQLSEEETKNVSQPLGCTSMDPPGDYFKSMKNSLVKSLSDCFPVEKRSSREGLKNEAEESKYSCRRTIPMTGKRTWPCYSCARISAQCWKKASLPQSSRQDDFLKHQTNQTYLTDSKLMLQSSVTETNSASSSIEKLDSNLNCLPSVSTVEPTSVVIKEPIVNDDEKMKSEKLSRSASEVVSNTTEDTPLTNVTHNLTGSKKKGRGNLTKLNLMVASQDGQEASNSTGKTIHQKACITKQALVVPDLVKILNTGRLTNFKIPLLKNKTEKRKEINAKSSEREVYSPLELLDNLSGAEVRQSRTKENAVTVTSGPQSLSIQHSVIPLQASSDSFCSKNSCIIAPSFLKQGNNNKPSNHISASGHIISNKAAGSLTVENNTFSCDPGCIEKNPTLYSNEQEPFKAGSSEVSGRKMTKNFSEVKVGFPDILKAYEDDVLLIDVIQDDPDLFGVSNEGELSFPSAVPMISQEPNVAEEHQSTDSKHMELPEKKEPSDDLRELPVPDPGSMKSEICASLSAASEIKHDSKDANISLGEVTHETSSNEKPGDLSEQTKSSDLDEKCRFSDKVATQEEQETISEVCRSDSKNTEIVVGECHLAALVSKPLCLPVPLPPLNLSAHQEDTLLNPWINDFRFPGKHSLLKLQNPEICEIFKREKNVGKPLGLMIPHRYCRFHFNTLHGCERPQCKFAHVPEQGDEKVCMDVFKKYISINELCLLQRAANMFMEYYRKFLPGIHFDLQVLNDLLNSLLKHCLLKEVLQVMNLCTMIKMLPALRILLKIFEYVATMKLRNAVPALIGIFCKLVEAGMVLDPEHFNYIVKLLYQIQASKPEITAVLEMKSRLHMRQFKKNWKCDLEAALNEIEHCKEKGDWTKLGNVYINIKMSCEKLADFQRFCACIAETLTKDNKEERPSVPFCEFAETVSKDPQNSEVDKTLLGRIGISAMYFYHKLLQWSKGRKVLDKLYELKIHFTSLKGLIGPEKLAPRCQIVNIAAEIFLKSGSLDGAIWVLRESEWIISTPVWPCDRLDVLNRHNLLCTIAHEILAKSLYRQTFEVLQNLPGFQNSQETVEVSQYSLLFNKLLDACIESNSLGMSSSVAEFMISKRIPVDFSFLRRLITSLGRSCLWLKARTHYKSALSLGCYPPLEGNLYRKLLLIPSYLSEIEMLLAIEIFLVSNASSIQSPGTSTQILQIVLKRCEENKSRSKDDYQAAVERLIMAARISDPKLFIKHMTVNVNKEQVYSLEHCSALKWLKENMKWAGKVWLFNNR"

     misc_feature    3727..4254
                     /gene="TOPAZ1"
                     /note="Putative aspartate racemase; Region:
                     Asp_Glu_race_2; pfam14669"
                     /db_xref="CDD:464250"
ORIGIN      

atgcggcggcttccaccctcgggccccactacggccccagggcgtgaaggcgactctcgaggactgaggaagagaagccggcggccagggccaggcgagtcaggaggctgcggccctgaggcggcggggcgcgaggagagcaggcaaaagaggaggatggtggcccgggtgtctgggagagaagaggtggaaagtgacaagtcagccaaggaaaaaagaaaagttactgaagcctcaagtgatgatccacagccagggattgacctggtaagaaaggaatcattaaccagttcggaatctttcccaacagtggaatgcagtgaatttcaaagtatggctttcttgcagtctttgggtaaggaaaggttgatagaaggtattaaaagaagaattcgaattaaaaaagttaaaagcttagaaagcccacctctcaaaatgactgaaaataaggctacacaaaatagtaaggttgaattccaagatgaactgtacaagaatactcagaaatattcttgtaacagcttgtcacctggagtagaaaataattccattttaaaattacatgattgcggttgtctctcccattccaaggattgtaatgatgaaaataatcttgcatataaacctgatggaggatgtttgcatgtacgagaaaattcctcaaagaaagaaaaccctaggagtcttatagataagactaatccaagcaatattcctcagcttttacaaactgaagaaaacttaatgcaagtaagtcagttattgcttgaagaagatgattcaaacctaagtaaaaataatggcatgttttcctgccttcaaagtgaaaacaataaacattcagtagaggagagcagtattgggagaaaatacagaaaaaagatgaaggtgtctgaaaaaggaaatggaatggttattgagatgaagttttctaatatgtgtaacaaatctgagctgatgttacaaggaaaccaaacaggtgctgaaggtaaagaaacagagactttagaagctgaaaaaagttctttgaaagttttgagaaaagtaaataataatatgctgtcaccgatggatcccttattaagtcttccagaaacagggaaaaaaacaagtcctaaacattatgtaaatgctgtgtttcagaaagcccttgagcaactttcagaagaagaaacaaagaatgtttcacagcctttaggatgtaccagcatggatccaccaggagattattttaagtcaatgaaaaactcattagtgaagtcacttagtgattgctttcctgttgaaaagagatcttctagggaaggcttgaagaatgaagctgaagaatctaaatatagctgtcgcagaacaataccaatgactggcaagagaacttggccttgttattcatgtgctagaatatctgcccagtgttggaaaaaagcttccttgccacaaagttctaggcaagatgattttcttaaacatcaaacgaatcaaacttacttaacggactccaaattaatgctacaaagttctgtaacagaaacaaacagtgcatcttcaagtatagaaaaattggattctaatttaaattgtttaccttcagtctctacagtggaacctacttcagtggttataaaggaacctatagtcaatgatgacgaaaaaatgaagtcagagaaactaagtagaagtgcatcagaggtagtttctaatactactgaagatactccattgactaatgtgacccacaacttaacaggaagtaaaaaaaaaggtagagggaatttaacaaaactgaatttgatggtggcttcccaggatggccaggaagcaagtaactctacaggcaaaactattcatcaaaaagcatgcattactaagcaagcattggttgttccagacctagttaagatactgaacacaggacggctgactaattttaaaattcctttacttaagaacaaaacagaaaaaagaaaagaaattaatgccaagtcatcagagagagaagtatatagtcccctagaacttcttgacaatttatctggagcagaggtaaggcagagtaggactaaagaaaatgctgtcacagtaacttcaggacctcaatctctgagtatacaacatagtgtaattccactgcaagctagttctgactcattctgcagtaagaattcctgtattattgctccgagctttttaaagcaaggtaataataataaaccatctaaccacatctctgcatcaggccatatcatttctaataaggcagctggttctctcacagttgaaaataatacattttcttgtgatcctggatgtatagagaaaaatcccaccttatattccaatgagcaagaaccattcaaagcaggttcctctgaagttagtggtagaaaaatgactaagaacttttcagaagtcaaagtggggtttccagatattctgaaagcatatgaagatgatgtcctcttaattgatgtaattcaagatgacccagacctgtttggagtctccaatgaaggggaactctcatttccttcagcggttcccatgataagccaggagcccaatgttgctgaagagcatcaatcgacagactccaagcacatggaacttccagaaaaaaaagaaccaagcgatgacttgagagaactgcctgtaccggatcctggatcaatgaaatcagagatctgtgcttccttgtcagcagcaagtgagataaaacatgattccaaagatgcaaacatttccttaggagaagttactcatgaaacttcttcaaatgaaaaaccgggagacctaagtgaacagacaaaaagttcagacttggacgaaaagtgtagattttcagacaaagtagctactcaagaagaacaagaaactatttctgaagtttgcagaagcgattctaaaaatacagagattgtggttggtgaatgtcacttagcagcactggtctccaaacctctgtgcttaccagtgccattgccgcctttgaatctaagtgctcatcaggaagacacattactgaatccctggataaatgatttcagatttccagggaagcattctctcctaaagctacagaatcctgaaatttgtgaaatatttaagagggaaaaaaatgtagggaagccactagggttgatgataccccacagatactgcagatttcattttaatacgttacatggctgtgagcgaccacaatgcaagtttgcccatgtgcctgagcaaggggatgaaaaggtttgtatggatgtgtttaagaaatatataagtatcaatgagctgtgtttgctacaacgtgcagcaaacatgtttatggagtactacagaaagtttcttccaggtatacactttgatttacaagtattaaatgaccttctaaattctttactcaaacactgtttattgaaagaagtattacaggtcatgaacctctgcacaatgattaagatgctgcctgctctgagaatattactaaaaatatttgagtatgtggcaactatgaaattaaggaatgctgtacctgctttaattggtatcttttgcaagctcgttgaagctgggatggtacttgacccagaacactttaactatatcgttaagcttttataccaaatacaggcttccaaaccagaaataactgcagttctggaaatgaaatccaggttacacatgaggcaatttaaaaagaactggaaatgtgacttagaggcagccttgaatgaaatagagcattgtaaagaaaaaggtgactggaccaaattgggaaatgtatacattaacataaaaatgagctgcgaaaaacttgcagatttccagagattttgtgcttgtattgctgaaacactaacaaaagacaataaagaagagcgaccaagtgttccattttgtgaatttgctgaaacagttagcaaagatccgcagaatagtgaagtagataaaactttgctgggaagaatcggaatcagtgctatgtacttctatcacaagctgttgcagtggtccaagggaaggaaggtcttagataaactatatgaattgaaaatacattttacaagtttaaaaggacttatagggcctgagaagttagcaccaagatgtcaaattgtgaatattgcagcagaaatttttctaaaaagtggaagcctagatggtgccatttgggtgttaagggagtccgagtggatcatcagtacaccagtatggccttgtgatcgactggatgtgctcaatcggcataatctgctctgtacgattgcacatgaaatcttagcgaagagtctttacagacagacatttgaagttttgcaaaatctaccaggttttcaaaattctcaagaaactgtggaggtctcacagtatagcctactttttaataaacttctagatgcctgtatagaaagcaacagccttggtatgtcatcctctgtagcagaattcatgatttcaaagagaatccctgttgatttttcctttcttagaagattaattacttctttaggaaggagttgtttatggctcaaagccagaacccactacaaaagtgctctttcactgggttgctacccaccattggagggaaatttgtaccgaaaacttctactgattccatcctatttgtctgaaattgaaatgcttttagctattgaaatcttcctggtatctaatgctagtagtattcagagtcctggaacttctacacaaatactgcagatagttttaaaaagatgtgaagaaaacaaatctcggagcaaagatgattatcaagctgcagtggaaagattaattatggctgctcgtatatcagatccaaagcttttcattaagcacatgaccgtcaatgttaataaggaacaggtttatagtttggaacactgttctgccctgaaatggttgaaagagaatatgaagtgggccggaaaggtttggcttttcaataaccgttagttataaaggctttttttttttaagttcaagtaatcattgttgaaaata

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