LOCUS       XM_020090884            5643 bp    mRNA    linear   VRT 08-FEB-2017
DEFINITION  PREDICTED: Paralichthys olivaceus testis and ovary specific PAZ
            domain containing 1 (topaz1), transcript variant X4, mRNA.
ACCESSION   XM_020090884
VERSION     XM_020090884.1
DBLINK      BioProject: PRJNA369269
KEYWORDS    RefSeq.
SOURCE      Paralichthys olivaceus (Japanese flounder)
  ORGANISM  Paralichthys olivaceus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei;
            Paralichthyidae; Paralichthys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_017859657.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Paralichthys olivaceus Annotation
                                           Release 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 7.2
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5643
                     /organism="Paralichthys olivaceus"
                     /mol_type="mRNA"
                     /db_xref="taxon:8255"
                     /chromosome="Unknown"
                     /sex="female"
                     /tissue_type="blood"
                     /dev_stage="adult"
                     /breed="gynogenesis"
     gene            1..5643
                     /gene="topaz1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 7 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:109631856"
     CDS             657..4718
                     /gene="topaz1"
                     /codon_start=1
                     /product="testis- and ovary-specific PAZ domain-containing
                     protein 1 isoform X3"
                     /protein_id="XP_019946443.1"
                     /db_xref="GeneID:109631856"
                     /translation="

MTDVQKDPGTLYELIGAEISSKKRTKLGYSMTKESMPSDADSKNISCNDTARTYFIDKEKTCSEMSGNSQSCLELTFGSCSTHTSTMKENCVHARHWVQIDKPRESDAAQMSSQLFCPMSEADADEPESSTCQRVRVYSRKQHFSCARTYMSWPFSNTSRTLTANTGTTACQAEHIHPSARNNSDSSINQIQSASLSSQTNDVLPNAPAETSSDTTHKVSHHNEEKEDVGCITAKRNGKRDSHMSSYSSDSNNMEFEPHFMDAQESFAGLLSDSATLSTSSQCDRAPGTDTALALSMPANGPDTDSSTSTPSPSVLGLNDWETTTTASPTSFLFTHSGLSPHSVFLLEKVKAVESAEARSACTSPVSSVKRVISAVEKPLFHSEETQMTSCPSPTSPFFSLHNCDSCHSCQSFLLLPQGRQEGDKEKEILTDRSPPKLEPYYNQSPMNHNYAVTFGRGSSSLQNITKEKCGETNSNEFLLPPLLSPVASPQWHLLRSSLPQRQCCLEEEMKNDNSKHTTLPGYHMPQIGEGDHQNGGENFDRHQHEGHANEEMEGASSKFKTMNDDFREGSQDNIDYEDDVEQSDRSLSEPCSSPSSDEGSPSETVGSERHKTEAEAAGGTDSSLLDEFTAYERDILLVNVIPDPELFENLPEESLLKLGPTRVSDAPKTRPAGAVKTLLPRWTPTVIVDLHNGSPDIKEESNSRPWRPQCNSNLSTIMGHFDANNNMNWSLERSQPVQAVNPPHNISAHMILRNGPLITNRANMTEIRRHKSTVYCRQYFSESLSCGFKMCRFKHVPVDGDEKFCVETVMRFIQNPTCVQKAGAVFTGYYQNNPPGVFFSMPVFVSLLWSLLKACMVSDILSVLSVSLAHKIAPGHEFLLALFDLVREKGLVGFLPQLMRLTFKMASGGLVLSLDWFESIKITPEFQQAIRSNSPVSVTANLNAPFPEYLNLAQSIVEIELCTKQEDWRRMGKVFRSICQSSHHPNQVEQISGRIAIALLSESKDKLSLPFATFAETVCPSEGDTLIQSFFGRIGVSLMLRYHKTHQWAKGRRVVEMLSLSKVRYSTLKGLFGNEDGASRCYLVTVATELFLLSGSVEGALNTLRENKWFLSSHSWPCEPADLDSRKHVLMRLAEKTSHRDTLEVLCNLPGIKMPNDLIDISRYGPLFDSHLRVCMDRQVLPVASDTVDFMLSHNLAVDHAMLQILFHKLGKQNHWLRAREVFRHSLSVGYYPGVSAPPGFMALIVPCHLGEVELALAFEMFIAVNAAAILQISETTTSCLSITLKRTQSSESEYLLAGSRLLSAACIPQPKLMVHYTEVNSSQEQVFTLDIFSARRWLRHNHLWANEVWTH"

     misc_feature    3534..4049
                     /gene="topaz1"
                     /note="Putative aspartate racemase; Region:
                     Asp_Glu_race_2; pfam14669"
                     /db_xref="CDD:464250"
ORIGIN      

gagagcccccccccccccaacatcagcacaggaaccaaggggccagaagctccaccacggggatgggcagcagctgaggcgtccatgtgtgcagccggaaacagccccgtgtttagtctgtgcgttgtccgttgagatgagggggtattcacattaaaatcgatgttagtcgggttgttgggcaacgtgtcggctcagggcccctggatgctgcagagaccgaagtgctaacaggaacacggtggactctcagcctgtcaaccgcggcgccacttagctgggttgttgctaaagacaaaaataggaatacacacccaagccccactggttcacaggggtgttcgagaagaactgtttcagcctccagctgtggtccctgtggggactgtgaatacatttcccctcagaggaagacactggttaagaaggagcaaaaaagcagtagcccagggccagagcagtctgcagatgagttaaaaattaataaaggaaacccagtcactgatgcctctaaggagattgtcacatgggtagaccagtacgcaaaggtaacgctttgtgacatagcccaaaaatgtcacccatacagtcacaattgtggctatgtgttaccggatgttctcaagaacaaggttgtgcattgcttcaaacatgacatgacagatgttcagaaggaccctggaacactttatgaactcattggagcagagatttccagtaagaaaagaacaaagcttgggtatagcatgacaaaagaaagcatgccttccgacgctgattcaaaaaacattagttgcaatgacacagcaagaacttactttatagacaaagagaaaacatgttcggagatgtctggtaacagtcagtcatgtttggaactcacatttgggagctgcagcactcacacttcaactatgaaagaaaactgcgtccatgcgagacattgggttcagatagacaaacccagagaaagtgacgcagcacaaatgtcatcacaactgttctgtccgatgagcgaggcggatgcagatgaaccagagtcatccacctgccagagagtgagggtctatagcagaaaacaacatttttcttgtgcacggacatacatgtcttggcccttctctaacacaagccgtacccttacagcaaatactggcactacagcctgtcaagcagaacacattcatccatcagctagaaacaatagtgactcttcaataaatcaaattcagtcagcttcgctgagcagccaaactaatgatgtgctcccaaatgcacctgcagagacctcttcagacacaacccacaaggtttctcatcacaatgaagaaaaggaggatgtagggtgcattacagccaagagaaatgggaaaagagacagtcatatgtcttcatactcttcagacagcaataacatggagtttgaacctcactttatggacgctcaagaatcatttgccggtctgctctcagattcggccacactttctacctcaagtcagtgtgatagagcgcctggcactgacacagctttggccttaagcatgccagctaatggaccagataccgacagctccacgtctactccatccccctcagtgttaggcctgaatgactgggaaacaaccactactgcgtctcccacatcatttctgttcacacacagtggcttgagcccacattcagtgttcctacttgagaaagtcaaagctgttgagtcggcagaagctcgatctgcatgcacgtcaccggtgtcctcagtcaaacgagttatcagcgctgtagaaaaaccattgtttcacagtgaagaaactcaaatgacttcatgtccttcacctacatctccatttttttctttgcacaactgtgactcctgtcattcatgtcaatccttcctcctcctacctcaaggtaggcaagagggtgataaagagaaagaaattctcactgacaggagtccaccaaaactggagccatattataaccaaagccccatgaaccacaactatgctgttacttttggaagaggcagttcgtcattacaaaacattaccaaggaaaagtgtggcgaaactaattcaaatgaattcctgcttccaccacttctttctcctgtcgcttcaccgcaatggcacttgctcagaagctccttgccccagagacaatgctgtttagaggaggagatgaaaaatgacaacagtaaacacacaacactaccaggatatcacatgccacagattggtgaaggtgatcatcagaatggcggggagaattttgaccgtcatcaacatgaaggacacgcaaatgaggaaatggagggagcctcatcaaaatttaaaactatgaatgacgatttcagagagggaagccaggataacattgattatgaagatgacgtggaacagtctgacagatctttgtcagaaccctgctcttctcccagcagcgatgaaggatccccatctgaaacggtgggcagtgagaggcataaaactgaagcggaagcagctggtggtactgacagcagccttcttgatgagttcaccgcttatgaacgtgatatcttgcttgtcaatgtgatccctgacccagagctgtttgaaaatctacctgaggaaagtctgctaaagttgggtcctacaagagtcagtgatgcccctaaaaccagacctgctggagcagtgaaaactctattaccgagatggacaccaacagttattgtagatcttcacaatggcagtcctgatatcaaagaggagagtaacagcagaccctggagacctcaatgtaacagcaacctttccacaatcatgggtcattttgatgccaacaataatatgaactggagcctggaaaggagtcagcccgtccaggcagtgaaccccccacataacatctctgcacatatgatcttaagaaatgggccattgatcacaaaccgggcaaacatgacagaaattaggcgccataaatctactgtttactgcagacagtacttcagtgagtctctgtcctgtggattcaagatgtgtcgattcaagcatgtgcctgtggacggagatgaaaagttctgtgttgaaactgtgatgcggttcatccaaaatccaacgtgtgtccagaaagcaggtgctgtatttacaggctactaccagaacaacccaccaggtgtgttcttctccatgccagtgtttgtgtcactcctctggtccctgctcaaagcctgcatggtgtctgatatcctctcagtccttagtgtcagcttggctcataagatagcgcctggccatgagttcctgctggccctgtttgacttggtgagagagaagggccttgtgggatttttacctcaactcatgcggctcacattcaagatggccagtggaggtctagtgctgagtttggattggtttgaaagtataaaaattactcctgagttccagcaggcaatccgttcgaactctcctgtttcagtgactgccaacctcaatgctccctttccagagtacctgaatctggcccaatccattgtggagatagagctttgtacgaagcaggaggactggagacggatgggaaaggtgttcaggtccatctgccaatccagccatcatcccaaccaagtggaacaaatcagtggccgcatcgccatagctctcctgtcagagagcaaagacaagctgtcactgccctttgctacctttgctgagacagtgtgtccgagtgagggtgacaccctgatccagagtttttttggcagaattggagtctcactcatgctaagatatcacaaaacacatcaatgggccaagggtcggcgggtggtggagatgctgtccctgtcaaaagtcagatactcaacgctgaagggtttgtttgggaatgaagacggagcttcacgctgctacttggtcactgtggcaaccgagcttttcctcctgagtggcagtgtggagggggctctgaacacgctacgagaaaacaaatggttcctgagttcgcactcatggccatgtgagcctgcagatctggatagtaggaagcatgtgttgatgcgcctggctgagaaaacttctcatcgggacacactggaggttctctgtaatctccctggaattaaaatgccaaatgacttgattgatatctccaggtacggccctctgtttgactctcatctacgagtgtgcatggacagacaagtccttcctgtagcctcagatacagtagacttcatgctctctcacaacctggcagttgaccatgcgatgcttcagattcttttccacaaacttggcaagcaaaaccattggctccgtgcacgggaagtcttcagacactctctgagtgtggggtactaccctggtgtgtctgccccccctggtttcatggcgttgatcgtcccctgtcatctgggggaggtggagctggctcttgcctttgagatgttcatcgctgtcaatgcagcggccatcctccaaatttcagagaccaccacatcttgcctcagcatcactctgaaacggactcaaagcagcgagagtgagtacctcttagctggtagccgcctcctctctgcagcttgtatccctcagcccaagctaatggttcactacacagaagtgaactcttcacaggagcaagttttcacacttgacattttctctgctcgacgatggctccgccacaatcatttgtgggcaaatgaagtgtggacacattgacccgaacacggttgttttcctgcactccctggaagcacttgattgattttctttgtacgaagttttaataagaagttgttcttgtccaaaacgtttgcttctgttgtttttcttaacgtcacagactgaaatgcaactgtctgtgtttgtatggaggatgtgtttgtgatgtcaaaagatgatctctattttgcagttgccatagttacactcaacaggagtcatcagcgttgatgtccctgaagtcaaggtccatgcatccatgtgtcaggaaactgatttctggccacattagagtcaaccaatatcatccgtcacctccagtggccttttcctgttttgttgaagatatgtggtttacctcttcatgctgccgcacctgtgtgtgtgtgtgtgtgtgtgtggggtggggggttggagaagcttgattacttgcatatgtgttaggcttttcttcagagcgtcctgcggtgtctgattggcctaatggcctcataatgcatgactttgaaacacaaggctgactttacacagcacattgacttccacatatctggtgatctttgtattcagtttgttgaattaataatcatagaaaaataaaattgggatagctgcattgtcattgagacattcttttcttctctacagaagaataaaaaatgcagctttaagtattttacttatatccacagttattagatattttcggtttcttacaaagtgttcagggtaaagcagatctacatggctgccattgacccacattgtcattaatcacatgtcatttcctggtatttaaccagcacagaatcttgtttaagttctatcgtattcggcctaatggcttactcagtgtctatggttcaatgagaaaatgttctaagtagcaacatgcaaatccatttttaataaacagacgttt

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