LOCUS       XM_019508807            5054 bp    mRNA    linear   VRT 16-DEC-2016
DEFINITION  PREDICTED: Gavialis gangeticus testis and ovary specific PAZ domain
            containing 1 (TOPAZ1), transcript variant X2, mRNA.
ACCESSION   XM_019508807
VERSION     XM_019508807.1
DBLINK      BioProject: PRJNA357062
KEYWORDS    RefSeq.
SOURCE      Gavialis gangeticus (Gharial)
  ORGANISM  Gavialis gangeticus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Crocodylia; Longirostres; Gavialidae;
            Gavialinae; Gavialis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_017729006.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Gavialis gangeticus Annotation
                                           Release 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 7.2
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5054
                     /organism="Gavialis gangeticus"
                     /mol_type="mRNA"
                     /isolate="Ggan-Ray"
                     /db_xref="taxon:94835"
                     /chromosome="Unknown"
                     /sex="female"
                     /tissue_type="blood"
     gene            1..5054
                     /gene="TOPAZ1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 1 sample with support for all annotated introns"
                     /db_xref="GeneID:109291713"
     CDS             184..4965
                     /gene="TOPAZ1"
                     /codon_start=1
                     /product="testis- and ovary-specific PAZ domain-containing
                     protein 1 isoform X2"
                     /protein_id="XP_019364352.1"
                     /db_xref="GeneID:109291713"
                     /translation="

MDLNEVSDAQVEKPLETAQNTAKESSVRTSSLVAYSESFQLPQSDGTQSKRSAPRCLARGSAVDCNRTKNKITKIKCLQRLTVQTAENKLTTSKSIECKDECREALKQHNSLLSIAEKNPVVALHDCHYLNTFVKSSVDGSNNSYKIDSGFLHVLHSKTVCPGRVTGQSGMNAVQAERWCAQGIISFDEEGTCQNREKCFSCSLNRNKCFRERKWSSGEKPRKKVKLFERTEKLATQNVLPGRVNSECELHTENKTLATVSLAVLGELNSNKTCLSSSCDLISNAHVENNTKKALNSLPKPVSRKMCMKPGAIEDRFEKNLQLPEAAQREKSFFNAESMAPQDHSNLKSPGVIRLVSDISNCCSDSGSCQKKLLNEKLFKKPEKLQVFSCQRAIPMTGKNVWPRESCARTSVWFPKKDKSIIEKKNSLTSFQGCSHQNTETLRGMDVTDNSKQLDLHMSMTEINKPNACKITDSNTECLASVAILESSLSDINGALRVTKDENLELSLDKGRSSMTFNSGSVQEGKVTLNLSGKQKQDKNKGALKAKNVAMTSQDSMCADNVGKMICNPEMPVTKQTQEFPGLVRMLSTGNLSNFKIPLLRNKNESRKVDYIRSFERETYSPLELLDNSAATPVRQNRTKENSPLVYSDFFLATAKETAYQITNKDFGNDGSERLSDEKKRLAEHVSACPWDFPERELMSPTSEGAFGTEFREKSNVADHSSKIVKHSTSSEVFVNDGKKLKEKPTQSSSTNFPDVLKAYEDDILVIDVIQDDPDLFGTTNEGEFELDCETEITKHGNILTSVEKQNFTPKFHNLQENKDSNYYHGYARDSPIQESGTLQPIADSCDSLITANEINKHDSSRGSSPLGGVTEESSEDGQLTESDEHTKGSNADEKYRFSGRSSVKEEKDSIYEKSSDSECAEFVSPDLSLGLQLPCLEVKAHHGSTVQKPGMNDFRYSGKCPLLPHPNSNCYEPWKMDKSVPVSYSIQKILEIELPRKYCRFYFNTLRGCERAECWFWHIPEQGDEKICMAVLRTYININETSLLQRAVQIFMNYYREVTPGVHFDLQVLNDLLIALLKHCLLKEVFLLLNVGIMIKRLPPIDVILKVLEHVASTNIREAVPTLIDAFCKLFDAGMGFESEHFNYIVKFLHQLQVSSQEINAILNIKSRFQAKQFKKNWLCDINMAIAEIQHCKEKSDWSSLGTLYINVRMGCQNFGDLQKLTLCIAEILTRDSTEERPGVPFCEFAETVIKNPQHNEGDKIFLGRIGISVMYSYHRVLQWSKGRKVLDKLHEFQIYFTSLKGLTGPERLASRCQIVNVAAEIFLKSGSLDGATWVLRDSEWVIDTAVWPCDRMDVLSRHNLLCALACEYLTKSQYRQTFEILQNLPGFQTCCDTLDVSQYSLLFNKLLDACIESKSLGVSSSVIDFMFSKKVPIDFTLLRGLITTLGRSCLWLKARTYYKSALSLGCYPPLEGNLYRKLLLIPSYMSEVEMLLAIEIFLVSNASNIQSPGATSQTLQIILKRCEEHKVQSKDDYRTAMDRVILAARISDPKLFLKHMTMNINMEQVYSLEHNSALKWLKENMKWAGKVWLFQ"

     misc_feature    3751..4278
                     /gene="TOPAZ1"
                     /note="Putative aspartate racemase; Region:
                     Asp_Glu_race_2; pfam14669"
                     /db_xref="CDD:464250"
ORIGIN      

cgggcctctggataaagaaggcagtctgggaaagcaagacaggctggttgtggaaccaaagttacagaaaccaaagaaaagggactagaggatgatggtgaaagacagacagatggcgatgaagagactgtggtttcatctgaattaaaattaaagataaggaaacctacaaagaaaaaaggaatggaccttaacgaagtttcagatgcacaagttgaaaagccgctagagactgctcagaatacggcaaaagaatccagtgtaaggacatcatcactagtagcttactctgaatcttttcaactacctcagtcagatgggactcaaagcaagagatcagcaccccgttgtttagcaagaggttctgcagtagattgtaatagaacaaaaaataaaatcaccaagatcaagtgtttacaaagattgactgtacaaacagctgaaaataaactgacaacaagcaaatcaatagaatgtaaagacgagtgcagagaagccttgaaacaacataacagtttgctgtccatagcagaaaagaatccagttgtggcattacatgactgccattaccttaatacttttgtaaagtcttcagttgatggaagcaacaacagttataaaattgatagtggattcttgcatgtactacacagtaaaactgtttgtcctggcagagttactggacagagtggtatgaatgcagtgcaagctgagagatggtgtgcacaggggattatatcatttgatgaagaaggaacatgccaaaacagagagaaatgtttttcatgctctctaaacagaaataagtgcttcagggaaagaaaatggagttctggtgaaaagcccaggaaaaaggtgaagctttttgagagaacagaaaaattagcaacccagaatgttctcccaggcagggtcaacagtgagtgtgaattacatacagaaaataaaactcttgcaacggtttctttggcagttttaggggaattaaatagcaataaaacttgtttgtcatcttcatgtgatctaatatcaaatgcccatgtggaaaataatactaaaaaagcactaaatagtctgcctaaaccagtcagtagaaaaatgtgcatgaaacctggtgccatagaagatagatttgagaagaatcttcagctccctgaagctgcacagagagaaaagtctttctttaatgcagaaagtatggcaccacaagatcattctaacttgaaaagtcctggagtgattagattggtcagtgacatttctaattgctgcagtgattcaggcagttgtcagaaaaaattgttgaatgaaaaactgtttaaaaaacctgagaaattgcaagtattcagctgtcaaagagcaataccaatgactggcaaaaatgtttggcctcgtgaatcttgtgccaggacttctgtatggtttcctaaaaaagataaatccatcatagaaaaaaaaaattccttaacttctttccagggctgttcacatcaaaacaccgaaactttgagaggtatggatgtaactgataactccaagcaattagatctgcatatgtccatgacagaaattaacaaaccaaatgcatgtaaaataacagattctaatacagaatgtttagcttctgttgcaatactagaatcatctctttcagatattaatggggctttgagggtcacaaaagatgaaaacctggagttgtcattagacaaaggtagaagttccatgacttttaactctggcagtgtgcaggaagggaaggtaaccttgaatttgtcaggaaaacaaaaacaagataaaaataaaggtgctttaaaagcaaaaaatgtagccatgacttcccaagatagtatgtgtgctgataatgtaggcaaaatgatctgtaaccctgagatgcctgttacaaaacaaactcaggaatttccaggcttagtgagaatgttaagcacaggaaatctgtcaaatttcaaaattcctttactgagaaataaaaatgagtccaggaaagtggactatattagatcatttgaaagagaaacatacagtccactggaacttcttgacaattctgctgctacacctgtaaggcagaacaggaccaaggagaattcccctttggtatattctgacttttttctggccactgcaaaggaaacagcttaccaaatcaccaataaagactttggaaatgatggttcagaaagactttcagatgaaaaaaaaagacttgctgaacatgtttctgcatgtccatgggactttcctgagagagagttaatgtcacctacttctgagggtgcttttggtactgaatttagagagaaaagtaatgtggctgatcactccagcaaaatagttaaacattctacttcatctgaagtatttgtcaatgatggaaaaaaattgaaagagaagcctacacagagttcatctacaaactttccagatgttcttaaagcgtatgaagatgacattcttgtgatagatgtaattcaggatgaccctgacctttttggaactactaatgaaggggagtttgaactggactgtgaaactgaaattacaaagcatggtaatattctcacctcggtggaaaagcagaattttactcccaaattccataaccttcaagaaaataaggactcaaactattatcatgggtatgcaagagacagtcccattcaagaatctggaacattgcaacctatcgcagattcctgtgattccttgataacagctaatgaaattaataaacatgattcttcaagaggaagcagccctttgggaggtgtaacagaggagtcttctgaggatgggcaactgaccgaatcagatgaacacacaaagggttccaatgcagatgagaagtacagattttcaggcagatcttctgtaaaagaagaaaaagacagcatttatgagaaaagcagtgattctgagtgtgcagaatttgtgagccctgatctttcactaggattgcagctgccttgcctggaagtaaaagcccatcatggaagtacagtacagaaacccgggatgaatgatttcagatattcaggcaagtgcccactcttgccacatcccaattctaactgttacgaaccatggaaaatggacaaaagtgtaccagtttcctactccatccagaaaatcctggagattgaattgccccgtaaatattgcagattttatttcaatacactgcgtggctgtgagagagcagaatgttggttttggcatattcctgagcaaggagatgaaaagatttgcatggcagtacttaggacatatataaatattaatgaaacaagtctgctacagcgtgcagtccagatatttatgaattactacagagaagttactcctggtgtgcattttgatttgcaagtgctgaatgaccttctgattgctttgctcaagcattgcttgttgaaggaagtatttctgctgttaaacgttggtataatgattaaaaggctgccacctattgatgtgattctgaaagtgttagaacatgtggcttccacgaatattagagaggctgtgcctacattaatagatgccttttgtaagctttttgatgccggaatgggttttgagtctgaacattttaactatattgttaagttccttcaccaattgcaagtttccagtcaggaaataaatgctattttgaacataaaatccaggtttcaagcaaaacagtttaaaaagaactggctttgtgacataaatatggcaatagctgaaattcagcactgtaaagaaaaaagtgactggtccagtttgggaactttatatataaatgttcgcatgggatgtcagaattttggtgaccttcaaaaattaactctgtgtattgctgaaatactcacacgagactccacagaagagagaccaggagttcctttttgtgagtttgctgaaacagttatcaaaaatccacaacataatgaaggagacaaaatttttctgggaagaattgggatcagtgttatgtattcttatcacagagtactgcagtggtcaaagggcaggaaggttttggataaattacatgagtttcagatatatttcacaagcttaaaaggacttactggtcctgagaggttagcatcaagatgccaaatcgttaatgttgctgcagaaatatttcttaaaagtggaagtctagatggagccacatgggtattaagagattcagaatgggtaatagatacagcagtgtggccctgtgatagaatggatgtcctcagtcgacacaatctgctgtgtgcccttgcatgtgaatatttgactaaaagccagtataggcaaacatttgaaattttgcagaatctaccaggtttccaaacttgctgtgatactctagatgtctctcaatacagccttctttttaacaaacttctagatgcctgtattgagagtaaaagcctgggagtatcttcttctgtaatagatttcatgttttcaaagaaagttcctattgattttactttactgagaggattaattacaacattgggaaggagctgtttatggcttaaagccaggacctattacaaaagtgctttatcattgggttgctatccaccactggaaggaaatttgtatcgcaaacttctgctgattccttcttacatgtctgaagttgagatgctgttggctattgaaatattccttgtttcaaatgctagtaatattcagagtccaggtgctactagtcagacacttcaaatcatactgaaaagatgtgaagaacataaggtgcagagtaaagatgattatcgaacagcaatggacagagtaattctagctgctcgtatatctgatccaaagctttttcttaagcacatgactatgaacattaatatggaacaagtttacagtttggaacataattctgctctaaaatggctgaaggaaaacatgaaatgggctggaaaagtctggctttttcagtagctattagttggtaatgatttttttgaacggttgaagtaatcattgttgaaaataataaaaatcaataaagactgtttccactgtttata

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