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2025-04-22 02:18:06, GGRNA.v2 : RefSeq release 229 (Mar, 2025)

LOCUS       XM_014531922             792 bp    mRNA    linear   MAM 04-NOV-2015
DEFINITION  PREDICTED: Myotis brandtii alkaline ceramidase 1 (ACER1),
            transcript variant X2, mRNA.
ACCESSION   XM_014531922
VERSION     XM_014531922.1
DBLINK      BioProject: PRJNA218631
KEYWORDS    RefSeq.
SOURCE      Myotis brandtii (Brandt's bat)
  ORGANISM  Myotis brandtii
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera;
            Vespertilionidae; Myotis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_005371360.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Myotis brandtii Annotation Release
                                           101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 6.4
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Myotis brandtii"
                     /mol_type="mRNA"
                     /db_xref="taxon:109478"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="Russia: Perm poKrai"
                     /lat_lon="58.8348 N 57.6119 E"
                     /collection_date="Dec-2011"
                     /note="collected at hibernation roost"
     gene            1..792
                     /gene="ACER1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 2 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:102250405"
     CDS             105..770
                     /gene="ACER1"
                     /codon_start=1
                     /product="alkaline ceramidase 1 isoform X2"
                     /protein_id="XP_014387408.1"
                     /db_xref="GeneID:102250405"
                     /translation="
MMFLMHPYAQKRSRSIYALCVLFMVIGLFSMYFHMTLSFLGQLLDEISILWLLAGGYSIWMPRCYFPTFLGENRPQFICLVVIATMVSTFLSFLRPTVNAYALNSIAVHILYIVFQEYKKTSNKELRHLIEVSVVLWAFALTSWISDRFLCSFWQQINFSYMHSIWHLFISITFPYGMVTMALVDARYEMPNQTLKVRYWPRDTWPVGLPYVEITGDHKNC"
     misc_feature    114..743
                     /gene="ACER1"
                     /note="Region: Ceramidase; pfam05875"
                     /db_xref="CDD:461766"
ORIGIN      
attgactgtaaagatgagctgaaagacttgacaaactctgggttgattcattacctgaaaggggatagttcagcaatgtcaccttcttcatctttgggcctctcatgatgttcctgatgcacccctatgcccagaaacgctcccgctccatttatgccctctgtgtcctcttcatggtcataggcctgttctccatgtacttccacatgacgctcagcttcctgggccaactgctggacgagatctctattctgtggttgctggctggtggctacagcatatggatgccccgctgctactttcccaccttcctaggggaaaacaggccccagtttatctgcctggttgtcatcgccaccatggtcagtaccttcctgtccttcctgaggcctacggtgaacgcatatgccctcaacagcatcgccgtgcatatcctctacatcgtgttccaggagtacaagaagaccagtaataaggagcttcgacatctcattgaggtctccgtggttttgtgggcttttgcattgaccagctggatcagtgaccgcttcctttgcagtttctggcagcagattaatttctcctacatgcacagcatctggcatttgttcatcagcatcaccttcccttatggcatggtcaccatggccttggtggacgccaggtatgagatgccaaaccaaaccctcaaagtccgctactggcctcgggacacgtggcccgtggggctgccctacgtggaaatcactggtgaccacaagaactgctgaagtctgccggtctctggactcc
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]