2024-11-15 19:28:28, GGRNA.v2 : RefSeq release 226 (Sep, 2024)
LOCUS XM_009873103 350 bp mRNA linear VRT 24-OCT-2014 DEFINITION PREDICTED: Apaloderma vittatum VCP-interacting membrane protein (VIMP), partial mRNA. ACCESSION XM_009873103 VERSION XM_009873103.1 DBLINK BioProject: PRJNA263608 KEYWORDS RefSeq. SOURCE Apaloderma vittatum (bar-tailed trogon) ORGANISM Apaloderma vittatum Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_009725914.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Apaloderma vittatum Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on the 5' end. FEATURES Location/Qualifiers source 1..350 /organism="Apaloderma vittatum" /mol_type="mRNA" /isolate="BGI_N311" /db_xref="taxon:57397" /chromosome="Unknown" /sex="male" /geo_loc_name="Tanzania" gene <1..350 /gene="VIMP" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:104276693" CDS <1..350 /gene="VIMP" /codon_start=3 /product="selenoprotein S" /protein_id="XP_009871405.1" /db_xref="GeneID:104276693" /translation="
PDVVVRRQEALAAARLRMQEELNAQAERYKERQRQLEEEKRRQKIAMWESMQEGKSYKGNLKLNQPEVESGASSAVPKSKPNKKPLRGGGYNPLSGEGGGTCSWRPGRRGPSAGG"
misc_feature <1..347 /gene="VIMP" /note="Selenoprotein S (SelS); Region: Selenoprotein_S; pfam06936" /db_xref="CDD:462043" ORIGIN
aacccgacgtggtggtgagaaggcaggaagctttggcagcagctcgcctcaggatgcaagaggagttgaacgcacaagcggagagatacaaagaaagacaacgacagcttgaagaagagaaacgaaggcagaagatagcaatgtgggagagtatgcaagaaggaaaaagctataaaggaaacctgaaactgaatcagccagaagtagaatctggtgcctcatcagcagtcccgaaatctaaaccaaacaaaaagcccttgcggggaggtggctataaccccctgtctggagaaggaggtggaacctgttcctggagaccaggccggagaggcccgtcggcaggtggatga
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@meso_cacase at
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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