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2024-11-15 19:28:25, GGRNA.v2 : RefSeq release 226 (Sep, 2024)

LOCUS       XM_006688023             300 bp    mRNA    linear   PLN 26-JUN-2024
DEFINITION  Yamadazyma tenuis 60S ribosomal protein eL36 (rpl36), partial mRNA.
ACCESSION   XM_006688023
VERSION     XM_006688023.2
DBLINK      BioProject: PRJNA1128327
            BioSample: SAMN33192236
KEYWORDS    RefSeq.
SOURCE      Yamadazyma tenuis
  ORGANISM  Yamadazyma tenuis
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Pichiomycetes; Debaryomycetaceae; Yamadazyma.
REFERENCE   1  (bases 1 to 300)
  AUTHORS   Hoyer,L.
  TITLE     Yamadazyma tenuis ATCC 10573 Genome Sequence
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 300)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JUN-2024) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 300)
  AUTHORS   Hoyer,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-FEB-2023) Pathobiology, University of Illinois
            Urbana-Champaign, 2001 S. Lincoln Avenue, Urbana, IL 61802, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_089461).
            
            On Jun 26, 2024 this sequence version replaced XM_006688023.1.
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Yamadazyma tenuis"
                     /mol_type="mRNA"
                     /strain="ATCC 10573"
                     /isolation_source="Bark beetle"
                     /type_material="type material of Candida tenuis"
                     /db_xref="taxon:2315449"
                     /chromosome="1"
                     /geo_loc_name="USA"
     gene            <1..>300
                     /gene="rpl36"
                     /locus_tag="PSN45_000610"
                     /old_locus_tag="CANTEDRAFT_125240"
                     /db_xref="GeneID:18249090"
     CDS             1..300
                     /gene="rpl36"
                     /locus_tag="PSN45_000610"
                     /old_locus_tag="CANTEDRAFT_125240"
                     /note="EggNog:ENOG503P53R; COG:J"
                     /codon_start=1
                     /transl_table=12
                     /product="60S ribosomal protein eL36"
                     /protein_id="XP_006688086.1"
                     /db_xref="GeneID:18249090"
                     /db_xref="InterPro:IPR000509"
                     /db_xref="InterPro:IPR038097"
                     /db_xref="PFAM:PF01158"
                     /translation="
MVKSGIASGLNKGHKVTPKDVKPKISYRKGALSKRTVFVRDIVKEVAGLAPYEKRLIELIRNAGEKRAKKLAKKRLGTHKRSLKKIEDMNKVIAEARRH"
     misc_feature    7..294
                     /gene="rpl36"
                     /locus_tag="PSN45_000610"
                     /old_locus_tag="CANTEDRAFT_125240"
                     /note="Ribosomal protein L36e; Region: Ribosomal_L36e;
                     pfam01158"
                     /db_xref="CDD:460088"
ORIGIN      
atggttaagtcaggtattgccagtggattaaacaagggtcacaaagtcaccccaaaggatgtcaagccaaagatctcttacagaaagggtgctttgtccaagagaaccgtctttgtcagagacatcgtcaaggaagttgccggtttggccccatatgaaaagagattgatcgaattgatcagaaacgctggtgaaaagagagctaagaagttggccaagaagagattgggtactcacaagagatctttaaagaagattgaagacatgaacaaggtcatcgctgaagccagaagacactaa
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]