LOCUS       XM_006045027            3990 bp    mRNA    linear   MAM 17-NOV-2021
DEFINITION  PREDICTED: Bubalus bubalis D-amino acid oxidase (DAO), transcript
            variant X1, mRNA.
ACCESSION   XM_006045027
VERSION     XM_006045027.4
DBLINK      BioProject: PRJNA779724
KEYWORDS    RefSeq.
SOURCE      Bubalus bubalis (water buffalo)
  ORGANISM  Bubalus bubalis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Bovidae; Bovinae; Bubalus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_059173.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Nov 17, 2021 this sequence version replaced XM_006045027.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Bubalus bubalis Annotation Release
                                           103
            Annotation Version          :: 103
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 9.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3990
                     /organism="Bubalus bubalis"
                     /mol_type="mRNA"
                     /isolate="160015118507"
                     /db_xref="taxon:89462"
                     /chromosome="17"
                     /sex="female"
                     /tissue_type="blood"
                     /dev_stage="Adult Heifer"
                     /geo_loc_name="India: Hissar, Haryana"
                     /breed="Murrah"
     gene            1..3990
                     /gene="DAO"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 28 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:102412409"
     CDS             441..1484
                     /gene="DAO"
                     /codon_start=1
                     /product="D-amino-acid oxidase isoform X1"
                     /protein_id="XP_006045089.2"
                     /db_xref="GeneID:102412409"
                     /translation="

MRVVVIGAGVIGLSTALCIHERYRSVLQSLDVMVYADRFTPLTTTDVAAGLWQPYLSEPSNPQEAHWNQQTFNYLLSLIGSPNAANMGLAPVSGYNLFREAVPDPYWKDMVLGFRKLTLRELDMFPDYSYGWFNTSLILEGRMYLQWLTERLTERGVKFFLRKVESFEEVVREGTDVIINCTGVWAGALQPDPLLQPGRGQIIKVDAPWLKHFVITHDPERGIYKSPYIIPGLQAITLGGIFQLGNWSETNNIPDHNTIWEGCCRLEPTLKDAKIIGECSGFRPVRPQVRLEREQLRFGSPNTEVIHNYGHGGFGLTIHWGCAQEVAKLFGKILEERNLLRIPPSHL"

     misc_feature    444..1427
                     /gene="DAO"
                     /note="FAD dependent oxidoreductase; Region: DAO;
                     pfam01266"
                     /db_xref="CDD:426168"
     polyA_site      3990
                     /gene="DAO"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

ctccaagaaccccccttcttcctccctccctctccgaggcctgtccacggggacttggggtcagccagaaaagtcaggcaacttgtcagggaccagagcaaggggaggtgaggtctcccaacctggctgggattcagcccctgagagcgccggcgggtgcccagccccaccccttgtgccctgtccgtcccttcagactttgaccctgagctccagtccgggccgaggacaggatgccccagaatcgggagcctcccttcaggagataggaccctgggcccacagcagctgcctctttgctgcagagatttggcacgccaggtgactgggggcaggggtaggggcacaaaagatctgagcgttcctccggtgtcggcagagaaggtccacattagagcctgacgcaggtgacaaccttgcagggaccacaggctggcacgatgcgcgtggtcgtgatcggagcgggcgtcatcgggctgtccaccgccctctgcatccatgagcgctatcgctcggtcctgcagtcgctggatgtgatggtctatgcagaccgcttcaccccactcaccaccaccgacgtggctgccggtctctggcagccctacctctcggagcccagcaacccacaggaggcgcactggaaccagcagaccttcaactatctcctgagcctcatcgggtctcccaacgccgcaaacatgggcctggccccagtctcaggctacaacctcttccgtgaagccgttccggacccttactggaaggatatggttctgggatttaggaagctgactctcagagagctggacatgtttcctgattacagctatggttggttcaacacaagcctgattctggaagggaggatgtatctgcagtggctgactgaaaggttaactgagagaggagtgaaattcttcctgcggaaggtggagtcttttgaggaggtggtaagagaaggcaccgatgtgattatcaactgcactggggtgtgggctggggcgctgcaaccagatcccctgctgcagccaggccgagggcagatcattaaggtggatgcgccatggttgaaacacttcgttatcacccatgaccctgagagaggcatctacaagtctccatacatcatcccagggctccaggcaataacccttggcggcatcttccagctggggaactggagtgaaacaaataatatcccagaccacaacaccatttgggaaggctgctgcagactggagcccacactgaaggatgcaaaaattatcggtgaatgttctggcttccggccagtacgcccccaggttcgactagaaagagaacagcttcgctttggatcgccaaacacagaggtcatccacaactatggccatggaggcttcgggctcaccatccactggggctgtgcccaagaggtggccaagctctttgggaaaattctggaagaaaggaatttgctcaggataccaccatcccacctctaaagatgccagtgacctccgccacccctcaataactcccggctcctctcagtcactaaaaactgtgctctatcacttgccccagtccaccccacccctgacttctttctgcaagaagcacaaggtgagaggaaaccacaaggtcaattccaagaagtgagtatggctcttccagtggccgaggtatctctcttgagtccacttatatggtgtcattgcttcctttttcctcctaaggtgggtagcagaatctattaacataggtgggtcacctgtctggagcaggacagcagacattaagaagtacagccagaaccgttacccagtgcattcacagaggaaggaaagctcagaaaatccaagtggagagacagctctgagtgaggagggttgaggaagctttgagtgaggaagctctgagtgaagagggttcatgaggaagctctgaatgaggaagctctgagtgaggagggtatgagtgaggaagctctgagtgaggagggtatgaggaagctctgagtgaggagggttgaggaagctttgagtgaggaagctctgagtgaggaagctctgagtgaagctctgagtgaggagggtatgaggaagctctgagtgaggagggttgaggaagctctgagtgaggaagctctgagtgaggagggttgaggaagctctgagtgaggatgctctgagtgagaagggtatgaggaagctctgaatgaggaagctctgagtgaggagggttgaggaagctctgagtgaggagggttgaggaagctctgagtgaggagggtatgaggaagctctgaatgaggaagctctgagtgaggagggtatgaggaagctctgagtgaggagggtgtgaggaagctctgagtgaggaggatgtgaggaagctctgagtgaggagggtgtaaggaagctctgagtgaggaagctctgaatgaggaagctctgagtgaggagggtatgaggaagttcagtgtgagggagggtgtgaggaagctctgagtgaggagggttgaggaagctctgagtgaggagggtatgaggaagctctgagtgaggagggtatgaggaagttcagtgtgagggagggtgtgaggaagctctgagtgaggagggtgtgaggaagctctgagtgaggaggatgtgaggaagctctgagtgaggagggtgtaaggaagctctgagtgaggaagctctgaatgaggaagctctgagtgaggagggtatgaggaagttcagtgtgagggagggtgtgaggaagctctgagtgaggagggtgtgaggaagtgccgagtgagggagggtgaggaagctctgagtcagggaaaatgtgaagaaatgctgagtaaggaaggatgtgaggaagcgctgagggagggagcttgtgaaaaaatgctgtgtgagggagggtctgaggaagccctgagtgaggaatgctgactgaggagggtgtgaggaagctctgagtgaagaggctctgagtgaggagggttaaggaagcagtgcgtgaggagggtatgaagaaatgctgagtgaggagggtatgaggatggctgagggagggatggtgtgaggaagctctgagtgagggtctgtgtgaggaagcgctgcatgaagaggggtgtgaggaagctgtgttaagagacagtgaaagtgggagtgtttcccaacactcaggaagctctgagtgttggagggtagaagaagtgctgagtgcgggagctctgagtgtggaaggcgtgaggcatctttgagtatggcagggtgtgaggtagctctgagggagggagctctgagttagggagtggaagctctagtgaggaggctctgagtgaggaaggttgtggaggctgctagtgagggagagggtgtggaaagcctgagtgtggggagtcctgagtaagggttaatgtgatgcagctctgaacgagtgaggatgtcccaaccttggtgcagtaaggccacagaaagcacttgagggagcgctgtaacagatttcatggcaggagtaggccaaagaggtgagacattgaacaacatgtaatgcctgttccacatccatgctagaaccatgctatcttgattacttgtagctttgtagtaagttttaaaatcccagctgggatttttgatagggattttgttaaatttatgaggtcaattttaggagttctgatatggacaccttaacagttttaaatcttcagattcatggtcatggaatgtctctattttttagatctttctttcaggattgttttatagtttgtaaatgtcttggactcttgttaaatttattctgttttatcctttttgatgctattgcgagtagaattgtttaattcaggaagtgctctgttttctggcatgtgggggcaggaatatttgaagtggttcatcatcaaatattctggattaatggagaatgattatatgtgatgtatctagatgttcaaatgtcaaggaatcagaatacagtaaagtaccaacagtgactaag

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