LOCUS       NM_001319713            1533 bp    mRNA    linear   INV 01-JUL-2024
DEFINITION  Hydra vulgaris claudin-18-like (LOC100204274), mRNA.
ACCESSION   NM_001319713
VERSION     NM_001319713.1
KEYWORDS    RefSeq.
SOURCE      Hydra vulgaris (swiftwater hydra)
  ORGANISM  Hydra vulgaris
            Eukaryota; Metazoa; Cnidaria; Hydrozoa; Hydroidolina;
            Anthoathecata; Aplanulata; Hydridae; Hydra.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from LN868219.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: LN868219.1, GGKF01050412.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00242133, SAMD00242134
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1533
                     /organism="Hydra vulgaris"
                     /mol_type="mRNA"
                     /db_xref="taxon:6087"
                     /chromosome="06"
                     /map="06"
     gene            1..1533
                     /gene="LOC100204274"
                     /gene_synonym="CLDNL1"
                     /note="claudin-18-like"
                     /db_xref="GeneID:100204274"
     misc_feature    182..184
                     /gene="LOC100204274"
                     /gene_synonym="CLDNL1"
                     /note="upstream in-frame stop codon"
     CDS             257..904
                     /gene="LOC100204274"
                     /gene_synonym="CLDNL1"
                     /note="Claudin-like 1"
                     /codon_start=1
                     /product="claudin-18-like"
                     /protein_id="NP_001306642.1"
                     /db_xref="GeneID:100204274"
                     /translation="

MLRNCLAVSTLVLGLMGFIFLCVSSGTTRWKEDIDFYKGTRAYLGLWRGCIYSQAKEEIGYPSYYNCDKDYLRPYLIEPPPWFNAVRSLMMLGCMGTGFGIFFFLLAFITDNAKKTGSKYWPSALVIFFGGLCALIGLSIFTAHKRYGVKYIYGGGEFFAQYWEEVQPIAVINGGEYKVETWLRWSYGVGWGGVGWTFFALLCAICADLIPKADY"

     misc_feature    284..>688
                     /gene="LOC100204274"
                     /gene_synonym="CLDNL1"
                     /note="PMP-22/EMP/MP20/Claudin family; Region:
                     PMP22_Claudin; cl21598"
                     /db_xref="CDD:473919"
ORIGIN      

gtcattggtatatatttttttaaatataatttttaaaataatataatattaaaataatacattgcaattttctaagttataataaaatccaaatgtcctgcaaaaactactgatgttgcatgttgttgatgctaatggtacaagctacactgatgttacaagagatcaatggttttatgcatagtgcttgatctattgtattttgcatcatatactgttagttagatataaaggaaaatttattgaaggaaaaaaaatgttaaggaattgtttagctgtgtcaacactagttcttgggttgatgggattcatatttttatgtgtgagttctggaacaactcgttggaaagaagatattgatttctataaagggaccagagcttatcttggtttgtggagaggatgtatatatagtcaagcaaaggaagagattggttatccatcatactacaattgtgacaaagattatctgcgaccttatttaattgagccaccaccttggtttaatgcagttcgatctcttatgatgctgggctgtatgggtactggttttggaatttttttctttttgttggctttcataacagataacgctaaaaagactggtagtaaatactggccttctgctcttgtcatattttttggaggtttatgtgccctgattggactaagcatatttacagctcataaaagatatggtgttaagtatatatatggaggtggtgagttttttgcacaatattgggaggaagttcaacctattgcagtcattaatggtggagaatataaagtcgagacatggttacgttggtcttacggagtgggatggggtggtgttggttggacattttttgctttactttgtgctatatgcgctgatttaattccgaaagctgattattaaaaaaggaggttctttatcaactaaattgagtacatatttttaaactattgatatagaggctgattcaaaaaagttagttttggattacataaactaatggtattgatattttatttctttgtgaatatttttatttactttgtgcatcaaaaatgtaagtagggttttatttttttggataggtttgtttttaaagtttatataacacttaatttaatatttgtgaatttttatatattaataatggttttatattttggttatttaattgaatgctttcgttttaagacataaaaatgggtaaaaatttagtacttatacgtcacagttgcaatgattagtatcacagtgtattaatgttattttttttttgttgttttttttttcaatagtgctaataattcaaatagtgatattaatattatttgtcaaaagaaactttaaaatactttatttatattgccttttttttactgttacgttatcacggcattgcgttttactgttttaatttaattttataaatctatattttagaactattgcatcgttttataatgattactctgtttattttgttaccatttttatgctatttccttttagaatcgaaaaaaagtttgaaaaag

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