2025-04-19 10:48:36, GGRNA.v2 : RefSeq release 229 (Mar, 2025)
LOCUS NM_001126825 2062 bp mRNA linear VRT 02-DEC-2019 DEFINITION Xenopus tropicalis claudin 8, gene 4 (cldn8.4), mRNA. ACCESSION NM_001126825 VERSION NM_001126825.1 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. REFERENCE 1 (bases 1 to 2062) AUTHORS Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW and Richardson P. TITLE Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative JOURNAL Dev. Dyn. 225 (4), 384-391 (2002) PUBMED 12454917 COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC160598.1. ##Evidence-Data-START## Transcript exon combination :: BC160598.1 [ECO:0000332] ##Evidence-Data-END## FEATURES Location/Qualifiers source 1..2062 /organism="Xenopus tropicalis" /mol_type="mRNA" /db_xref="taxon:8364" /chromosome="2" /map="2" gene 1..2062 /gene="cldn8.4" /gene_synonym="claudin-8" /note="claudin 8, gene 4" /db_xref="GeneID:100145356" /db_xref="Xenbase:XB-GENE-991592" exon 1..2060 /gene="cldn8.4" /gene_synonym="claudin-8" /inference="alignment:Splign:2.0.8" CDS 31..711 /gene="cldn8.4" /gene_synonym="claudin-8" /codon_start=1 /product="claudin 8, gene 2" /protein_id="NP_001120297.1" /db_xref="GeneID:100145356" /db_xref="Xenbase:XB-GENE-991592" /translation="
MALQLVGLVLGGIGLIGTCAVTGMPQWRVTAFIDNNIVVFEAQWEGLWMNCVRQANIRMQCKVYDSLLALTPDLQAGRALMCVAVCLTFLSFMIAIIGMKCTVCVGDNARTKGIILLVAGITFILSGIVVLIPVSWTGNQIIRDFYNPLVLSSQKRELGDALYIGWTTALVLIAGGLILCCTFRSGEKEVRYSLPPKSVTSAPPPKSAISVPIRKPSSLYSKSQYV"
misc_feature 31..567 /gene="cldn8.4" /gene_synonym="claudin-8" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:473919" ORIGIN
gtactgctgagctccatctgggaagacaatatggctttgcaacttgttggtctggtgttgggaggcattggcttgataggaacttgtgctgtcaccggcatgccccaatggagagtgactgccttcattgataacaacattgtggtgtttgaggcacagtgggaaggattgtggatgaactgtgtcaggcaagccaacatcaggatgcagtgcaaggtatatgattcactgttggcactgacacctgacttgcaggctggcagagcactgatgtgcgtggctgtctgcttgacattcctttctttcatgatcgccatcattggcatgaaatgcaccgtgtgtgttggagataatgcaagaacaaaagggattatacttctggtagctggcataacattcatcctttctgggattgtggttctgattccagtatcctggactggtaatcagataatcagggacttctacaatcctcttgttctttcatcgcagaagagagagctgggtgatgctctgtacattggctggaccacagcattggtacttattgctggagggctaattctttgctgtacattccggagcggtgaaaaagaagtcagatacagcctgcctcctaaatcggtaaccagtgctccaccgcctaagtcagcaatcagtgttccaatacggaagccatcaagcctctactccaaaagccaatatgtgtaggaaggactacctagagctggagatcccctgtagacaaagtaggacttgcaaaggactgactttctttggactacataatgggagagtaagagtgaaccatttgagaatgtgtacagtggtcttaacacaggacttgtggttttggggaacaaataccaagaatcatgagcttatggacatttgcagctaacaggaaaaaggattttttgtttttttttctgcaccagaatatttcctttcaactgccatgcaagtaacaccgggtgttgaaggaggatcacagactgaagacaaagtgactttaactcaactcttgatcttcggtacaattgtaagctctgagggtaacctacaaaatgaagccatcccatgggaatggccgttgaacatctgcggtagggcagggcccaagcaggttttctgtatgtgcattgtaaggtagcgtgaattcttataacactcattatgcaatttaataattagcactgcagggcacccattcctgcagctgccaatgttccctatttatagcgtttactttacacttttactgttttccctgaaatgaattgttaggagcttatcatttttccttcaaattatactttaaaatgattttctgagcattagctaagccagcctttctataattttgtagatttttgtagaagtaaagagtgataatggtctaaatttttatttcaacccaaaacatcagaggaacaccaggccaaaccttagtgctgccttttggtgactttgaataaaagacttttgttgcccctttgcccatcccagccgtagacttgccatccccaaaccattgagttcccagggtaaaaaaaaaatcacacagttttattagtaggtgctcttgtgacttgaaggcaatattatgaacggcatagtggggagttattttcaatttcctatatatttttttttataattgtatataaaaatgcattagtatatacaggcaggggcattactgctgtttagattattattgtaacacaggcacacaatatacaatttactattgtattataatataatgcaaacacttataattggttaataacaataagtcttcaggttccaggatacattggattcaaactctgtctgcagtgaattaggctgtagcaaatgctttatattggaaactacccaagacttataaccattcctatttaacggagccctcgggtgttgctgtatacaatgctgttttgaaatatctatacatccagttaagctaaatagtcagtcttcctatattaatgtaaatgtgttgaaactgtataaataaagaataataaataataaaaacccttataacctcaaa
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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