2025-04-20 02:48:01, GGRNA.v2 : RefSeq release 229 (Mar, 2025)
LOCUS NM_001182617 642 bp mRNA linear PLN 17-DEC-2024 DEFINITION Saccharomyces cerevisiae S288C kinetochore-associated Ndc80 complex subunit SPC24 (SPC24), partial mRNA. ACCESSION NM_001182617 VERSION NM_001182617.1 DBLINK BioProject: PRJNA128 KEYWORDS RefSeq. SOURCE Saccharomyces cerevisiae S288C ORGANISM Saccharomyces cerevisiae S288C Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces. REFERENCE 1 (bases 1 to 642) AUTHORS Engel,S.R., Wong,E.D., Nash,R.S., Aleksander,S., Alexander,M., Douglass,E., Karra,K., Miyasato,S.R., Simison,M., Skrzypek,M.S., Weng,S. and Cherry,J.M. TITLE New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources JOURNAL Genetics 220 (4) (2022) PUBMED 34897464 REFERENCE 2 (bases 1 to 642) AUTHORS Bowman,S., Churcher,C., Badcock,K., Brown,D., Chillingworth,T., Connor,R., Dedman,K., Devlin,K., Gentles,S., Hamlin,N., Hunt,S., Jagels,K., Lye,G., Moule,S., Odell,C., Pearson,D., Rajandream,M., Rice,P., Skelton,J., Walsh,S., Whitehead,S. and Barrell,B. TITLE The nucleotide sequence of Saccharomyces cerevisiae chromosome XIII JOURNAL Nature 387 (6632 SUPPL), 90-93 (1997) PUBMED 9169872 REFERENCE 3 (bases 1 to 642) AUTHORS Goffeau,A., Barrell,B.G., Bussey,H., Davis,R.W., Dujon,B., Feldmann,H., Galibert,F., Hoheisel,J.D., Jacq,C., Johnston,M., Louis,E.J., Mewes,H.W., Murakami,Y., Philippsen,P., Tettelin,H. and Oliver,S.G. TITLE Life with 6000 genes JOURNAL Science 274 (5287), 546 (1996) PUBMED 8849441 REFERENCE 4 (bases 1 to 642) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (17-DEC-2024) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 642) CONSRTM Saccharomyces Genome Database TITLE Direct Submission JOURNAL Submitted (04-MAY-2012) Department of Genetics, Stanford University, Stanford, CA 94305-5120, USA REMARK Protein update by submitter REFERENCE 6 (bases 1 to 642) CONSRTM Saccharomyces Genome Database TITLE Direct Submission JOURNAL Submitted (31-MAR-2011) Department of Genetics, Stanford University, Stanford, CA 94305-5120, USA REMARK Sequence update by submitter REFERENCE 7 (bases 1 to 642) CONSRTM Saccharomyces Genome Database TITLE Direct Submission JOURNAL Submitted (14-DEC-2009) Department of Genetics, Stanford University, Stanford, CA 94305-5120, USA COMMENT REVIEWED REFSEQ: This record has been curated by SGD. This record is derived from an annotated genomic sequence (NC_001145). ##Genome-Annotation-Data-START## Annotation Provider :: SGD Annotation Status :: Full Annotation Annotation Version :: R64-4-1 URL :: http://www.yeastgenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..642 /organism="Saccharomyces cerevisiae S288C" /mol_type="mRNA" /strain="S288C" /db_xref="taxon:559292" /chromosome="XIII" gene <1..>642 /gene="SPC24" /locus_tag="YMR117C" /db_xref="GeneID:855144" CDS 1..642 /gene="SPC24" /locus_tag="YMR117C" /experiment="EXISTENCE:direct assay:GO:0000776 kinetochore [PMID:11511347]" /experiment="EXISTENCE:direct assay:GO:0031262 Ndc80 complex [PMID:11266451|PMID:11179222]" /experiment="EXISTENCE:mutant phenotype:GO:0000776 kinetochore [PMID:11179222]" /experiment="EXISTENCE:mutant phenotype:GO:0007059 chromosome segregation [PMID:11266451]" /experiment="EXISTENCE:mutant phenotype:GO:0098653 centromere clustering [PMID:11179222]" /note="Component of the kinetochore-associated Ndc80 complex; involved in chromosome segregation, spindle checkpoint activity, and kinetochore clustering; evolutionarily conserved; other members include Ndc80p, Nuf2p, Spc24p, and Spc25p" /codon_start=1 /product="kinetochore-associated Ndc80 complex subunit SPC24" /protein_id="NP_013835.1" /db_xref="GeneID:855144" /db_xref="SGD:S000004723" /translation="
MSQKDNLLDNPVEFLKEVRESFDIQQDVDAMKRIRHDLDVIKEESEARISKEHSKVSESNKKLNAERINVAKLEGDLEYTNEESNEFGSKDELVKLLKDLDGLERNIVSLRSELDEKMKLYLKDSEIISTPNGSKIKAKVIEPELEEQSAVTPEANENILKLKLYRSLGVILDLENDQVLINRKNDGNIDILPLDNNLSDFYKTKYIWERLGK"
misc_feature 271..630 /gene="SPC24" /locus_tag="YMR117C" /note="Spc24 subunit of Ndc80; Region: Spc24; pfam08286" /db_xref="CDD:429899" ORIGIN
atgtcacaaaaggataacctactcgacaatccggttgaatttttaaaagaggtcagagaaagttttgatattcagcaagatgttgatgccatgaaaagaatccgacacgatcttgatgttataaaagaggaaagcgaagcaagaattagtaaagagcattcaaaggtttctgagtcgaacaagaaattgaatgcggaaagaataaatgttgctaaattggagggagacttagaatatactaacgaagagagcaatgagtttggtagtaaagacgaactagttaaacttctgaaagatttggacggattggaacgtaatattgtgtcacttcgaagtgaattggacgaaaagatgaaattgtacctcaaagatagtgaaataatatccacaccgaacggttccaaaataaaagcaaaagtaattgaacctgagctggaagaacaaagtgcggtcaccccggaagcaaacgaaaatattctaaaattgaagctatacagatctttaggagttattttggatttagaaaatgatcaagtccttattaacagaaaaaatgatgggaatattgatattttacccttggacaataacctcagcgatttctataagaccaaatacatctgggaaagattaggaaagtga
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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